RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 NOC3LQ8WTT2 800 aaKnown RBP14.11□□□□□ -0.15
TNFRSF1A-215ENST00000543359 C2orf15Q8WU43 125 aaKnown RBP14.11□□□□□ -0.15
TNFRSF1A-215ENST00000543359 SMARCD2Q92925 531 aa14.11□□□□□ -0.15
TNFRSF1A-215ENST00000543359 RSPRY1Q96DX4 576 aa14.11□□□□□ -0.15
TNFRSF1A-215ENST00000543359 IL21Q9HBE4 155 aa14.11□□□□□ -0.15
TNFRSF1A-215ENST00000543359 KIAA1586Q9HCI6 787 aa14.11□□□□□ -0.15
TNFRSF1A-215ENST00000543359 FAM86C1Q9NVL1 165 aa14.11□□□□□ -0.15
TNFRSF1A-215ENST00000543359 PTPRZ1P23471 2315 aaPredicted RBP14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 A0A1W2PRU2 124 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 GABRDO14764 452 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 HAPLN1P10915 354 aaPredicted RBP14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 VIPR2P41587 438 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 TUFMP49411 452 aaKnown RBP14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 CYP24A1Q07973 514 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 SMARCB1Q12824 385 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 PSMD6Q15008 389 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 SURF1Q15526 300 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 KNOP1Q1ED39 458 aaKnown RBP14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 DUOXA2Q1HG44 320 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 SOWAHAQ2M3V2 549 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 STXBP5Q5T5C0 1151 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 VITQ6UXI7 678 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 WDR49Q8IV35 697 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 TMEM86AQ8N2M4 240 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 TOP6BLQ8N6T0 577 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 XXYLT1Q8NBI6 393 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 SPATA18Q8TC71 538 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 TMEM174Q8WUU8 243 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 ZNF516Q92618 1163 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 SPATA32Q96LK8 384 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 LRRC3BQ96PB8 259 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 LPIN3Q9BQK8 851 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 ACBD6Q9BR61 282 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 FOXQ1Q9C009 403 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 ZFP14Q9HCL3 533 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 DMAC2Q9NW81 257 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 CGNQ9P2M7 1197 aaKnown RBP14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 FAM186AA6NE01 2351 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 COL4A2P08572 1712 aa14.1□□□□□ -0.15
TNFRSF1A-215ENST00000543359 EP300Q09472 2414 aaPredicted RBP14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 HCRTO43612 131 aa14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 LRRN2O75325 713 aa14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 CST3P01034 146 aaPredicted RBP14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 TMEM191BP0C7N4 346 aa14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 CYP2J2P51589 502 aa14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 NDUFA8P51970 172 aa14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 PFKPQ01813 784 aa14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 PRKCQQ04759 706 aa14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 BFSP1Q12934 665 aa14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 MLF2Q15773 248 aaPredicted RBP14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 CCDC142Q17RM4 750 aa14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 KMT5BQ4FZB7 885 aa14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 TRAPPC11Q7Z392 1133 aa14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 TMEM150AQ86TG1 271 aa14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 CEP57L1Q8IYX8 460 aa14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 DCP1BQ8IZD4 617 aaKnown RBP14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 ZNF687Q8N1G0 1237 aa14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 RDH13Q8NBN7 331 aa14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 ZSCAN18Q8TBC5 510 aaPredicted RBP14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 SPPL2BQ8TCT7 592 aa14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 PLEKHO2Q8TD55 490 aa14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 KBTBD7Q8WVZ9 684 aa14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 ATOH1Q92858 354 aaPredicted RBP14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 HPDLQ96IR7 371 aa14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 ANKRD36BP1Q96IX9 119 aa14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 SEPT5Q99719 369 aaPredicted RBP14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 GPR88Q9GZN0 384 aa14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 IRF2BPLQ9H1B7 796 aa14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 KCTD10Q9H3F6 313 aa14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 DDX43Q9NXZ2 648 aaKnown RBP14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 USP25Q9UHP3 1055 aa14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 MTF2Q9Y483 593 aaPredicted RBP14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 SNX9Q9Y5X1 595 aa14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 DENND4CQ5VZ89 1909 aa14.09□□□□□ -0.15
TNFRSF1A-215ENST00000543359 A0A1W2PQ27 194 aa14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 A0A1W2PQ64 194 aa14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 A0A1W2PQD8 194 aa14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 KANSL1LA0AUZ9 987 aa14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 PROB1E7EW31 1015 aa14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 ARNTLO00327 626 aa14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 HUS1O60921 280 aa14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 TNNC2P02585 160 aa14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 DCNP07585 359 aaKnown RBP14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 KRT19P08727 400 aa14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 HMGA1P17096 107 aaKnown RBP14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 ACAT1P24752 427 aaKnown RBP14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 WEE1P30291 646 aa14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 NBL1P41271 181 aa14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 FZD5Q13467 585 aa14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 GRM2Q14416 872 aa14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 MGAT5BQ3V5L5 792 aa14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 INTS6LQ5JSJ4 861 aaKnown RBP14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 FAM171BQ6P995 826 aa14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 DPH6Q7L8W6 267 aa14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 HS2ST1Q7LGA3 356 aa14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 ITIH5Q86UX2 942 aa14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 MFSD6LQ8IWD5 586 aa14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 PJA1Q8NG27 643 aa14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 CCDC127Q96BQ5 260 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms