RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 USP37Q86T82 979 aa4.6□□□□□ -1.67
LEMD3-204ENST00000542032 PSD4Q8NDX1 1056 aa4.6□□□□□ -1.67
LEMD3-204ENST00000542032 TFAP2BQ92481 460 aa4.6□□□□□ -1.67
LEMD3-204ENST00000542032 DDX17Q92841 729 aaKnown RBP4.6□□□□□ -1.67
LEMD3-204ENST00000542032 RFKQ969G6 155 aa4.6□□□□□ -1.67
LEMD3-204ENST00000542032 FBXL20Q96IG2 436 aa4.6□□□□□ -1.67
LEMD3-204ENST00000542032 KIAA1586Q9HCI6 787 aa4.6□□□□□ -1.67
LEMD3-204ENST00000542032 KMT5AQ9NQR1 393 aa4.6□□□□□ -1.67
LEMD3-204ENST00000542032 LMBRD1Q9NUN5 540 aa4.6□□□□□ -1.67
LEMD3-204ENST00000542032 PNPOQ9NVS9 261 aa4.6□□□□□ -1.67
LEMD3-204ENST00000542032 TRIAP1O43715 76 aa4.59□□□□□ -1.67
LEMD3-204ENST00000542032 ALDH1L1O75891 902 aa4.59□□□□□ -1.67
LEMD3-204ENST00000542032 DNAJB5O75953 348 aa4.59□□□□□ -1.67
LEMD3-204ENST00000542032 KIF20AO95235 890 aa4.59□□□□□ -1.67
LEMD3-204ENST00000542032 AHSGP02765 367 aa4.59□□□□□ -1.67
LEMD3-204ENST00000542032 PF4V1P10720 104 aa4.59□□□□□ -1.67
LEMD3-204ENST00000542032 ZNF37AP17032 561 aaPredicted RBP4.59□□□□□ -1.67
LEMD3-204ENST00000542032 SOX10P56693 466 aa4.59□□□□□ -1.67
LEMD3-204ENST00000542032 PROK1P58294 105 aa4.59□□□□□ -1.67
LEMD3-204ENST00000542032 MRPS21P82921 87 aaKnown RBP4.59□□□□□ -1.67
LEMD3-204ENST00000542032 PLS1Q14651 629 aa4.59□□□□□ -1.67
LEMD3-204ENST00000542032 B3GALNT2Q8NCR0 500 aa4.59□□□□□ -1.67
LEMD3-204ENST00000542032 TOR1AIP2Q8NFQ8 470 aa4.59□□□□□ -1.67
LEMD3-204ENST00000542032 FBXO41Q8TF61 875 aa4.59□□□□□ -1.67
LEMD3-204ENST00000542032 SARAFQ96BY9 339 aa4.59□□□□□ -1.67
LEMD3-204ENST00000542032 PBKQ96KB5 322 aa4.59□□□□□ -1.67
LEMD3-204ENST00000542032 CAMKK2Q96RR4 588 aa4.59□□□□□ -1.67
LEMD3-204ENST00000542032 RHOBTB2Q9BYZ6 727 aa4.59□□□□□ -1.67
LEMD3-204ENST00000542032 RSAD1Q9HA92 442 aa4.59□□□□□ -1.67
LEMD3-204ENST00000542032 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.59□□□□□ -1.67
LEMD3-204ENST00000542032 DDX56Q9NY93 547 aaKnown RBP4.59□□□□□ -1.67
LEMD3-204ENST00000542032 WIPF3A6NGB9 483 aa4.58□□□□□ -1.68
LEMD3-204ENST00000542032 F5H697 171 aa4.58□□□□□ -1.68
LEMD3-204ENST00000542032 ALDH2P05091 517 aa4.58□□□□□ -1.68
LEMD3-204ENST00000542032 CHRM2P08172 466 aa4.58□□□□□ -1.68
LEMD3-204ENST00000542032 PDGFRBP09619 1106 aa4.58□□□□□ -1.68
LEMD3-204ENST00000542032 PCSK6P29122 969 aa4.58□□□□□ -1.68
LEMD3-204ENST00000542032 PHKA1P46020 1223 aa4.58□□□□□ -1.68
LEMD3-204ENST00000542032 ANAPC15P60006 121 aa4.58□□□□□ -1.68
LEMD3-204ENST00000542032 TTF1Q15361 905 aaPredicted RBP4.58□□□□□ -1.68
LEMD3-204ENST00000542032 ARHGEF25Q86VW2 580 aa4.58□□□□□ -1.68
LEMD3-204ENST00000542032 TNPO1Q92973 898 aaKnown RBP4.58□□□□□ -1.68
LEMD3-204ENST00000542032 C1GALT1C1Q96EU7 318 aa4.58□□□□□ -1.68
LEMD3-204ENST00000542032 ALG8Q9BVK2 526 aa4.58□□□□□ -1.68
LEMD3-204ENST00000542032 SPATA5L1Q9BVQ7 753 aa4.58□□□□□ -1.68
LEMD3-204ENST00000542032 METTL14Q9HCE5 456 aaKnown RBP4.58□□□□□ -1.68
LEMD3-204ENST00000542032 SLAMF7Q9NQ25 335 aa4.58□□□□□ -1.68
LEMD3-204ENST00000542032 IL17RBQ9NRM6 502 aa4.58□□□□□ -1.68
LEMD3-204ENST00000542032 ASB6Q9NWX5 421 aa4.58□□□□□ -1.68
LEMD3-204ENST00000542032 IP6K2Q9UHH9 426 aa4.58□□□□□ -1.68
LEMD3-204ENST00000542032 PNMA8BQ9ULN7 279 aaPredicted RBP4.58□□□□□ -1.68
LEMD3-204ENST00000542032 FRMD4BQ9Y2L6 1034 aa4.58□□□□□ -1.68
LEMD3-204ENST00000542032 PCDHA1Q9Y5I3 950 aa4.58□□□□□ -1.68
LEMD3-204ENST00000542032 NR2E3Q9Y5X4 410 aa4.58□□□□□ -1.68
LEMD3-204ENST00000542032 POLR2AP24928 1970 aaKnown RBP4.58□□□□□ -1.68
LEMD3-204ENST00000542032 E2F8A0AVK6 867 aa4.57□□□□□ -1.68
LEMD3-204ENST00000542032 LINC00473A8K010 186 aa4.57□□□□□ -1.68
LEMD3-204ENST00000542032 ORC4O43929 436 aa4.57□□□□□ -1.68
LEMD3-204ENST00000542032 MAP4K4O95819 1239 aaPredicted RBP4.57□□□□□ -1.68
LEMD3-204ENST00000542032 RHOP08100 348 aa4.57□□□□□ -1.68
LEMD3-204ENST00000542032 PIM1P11309 404 aaPredicted RBP4.57□□□□□ -1.68
LEMD3-204ENST00000542032 KRTAP5-9P26371 169 aa4.57□□□□□ -1.68
LEMD3-204ENST00000542032 FOXF2Q12947 444 aa4.57□□□□□ -1.68
LEMD3-204ENST00000542032 PIN1Q13526 163 aaPredicted RBP4.57□□□□□ -1.68
LEMD3-204ENST00000542032 PLEKHG6Q3KR16 790 aa4.57□□□□□ -1.68
LEMD3-204ENST00000542032 RBM20Q5T481 1227 aaKnown RBP4.57□□□□□ -1.68
LEMD3-204ENST00000542032 FAM160B1Q5W0V3 765 aa4.57□□□□□ -1.68
LEMD3-204ENST00000542032 B3GNT9Q6UX72 402 aa4.57□□□□□ -1.68
LEMD3-204ENST00000542032 PLBD2Q8NHP8 589 aa4.57□□□□□ -1.68
LEMD3-204ENST00000542032 BRIX1Q8TDN6 353 aaKnown RBP4.57□□□□□ -1.68
LEMD3-204ENST00000542032 DIS3LQ8TF46 1054 aaKnown RBP4.57□□□□□ -1.68
LEMD3-204ENST00000542032 ZNF384Q8TF68 577 aa4.57□□□□□ -1.68
LEMD3-204ENST00000542032 ANKS1AQ92625 1134 aa4.57□□□□□ -1.68
LEMD3-204ENST00000542032 SLC35A4Q96G79 324 aa4.57□□□□□ -1.68
LEMD3-204ENST00000542032 CDK5RAP3Q96JB5 506 aa4.57□□□□□ -1.68
LEMD3-204ENST00000542032 AIFM3Q96NN9 605 aa4.57□□□□□ -1.68
LEMD3-204ENST00000542032 MAP3K14Q99558 947 aa4.57□□□□□ -1.68
LEMD3-204ENST00000542032 RTFDC1Q9BY42 306 aaPredicted RBP4.57□□□□□ -1.68
LEMD3-204ENST00000542032 AASDHPPTQ9NRN7 309 aa4.57□□□□□ -1.68
LEMD3-204ENST00000542032 ADARB2Q9NS39 739 aaKnown RBP4.57□□□□□ -1.68
LEMD3-204ENST00000542032 HESX1Q9UBX0 185 aa4.57□□□□□ -1.68
LEMD3-204ENST00000542032 ADAM21Q9UKJ8 722 aa4.57□□□□□ -1.68
LEMD3-204ENST00000542032 STXBP5LQ9Y2K9 1186 aa4.57□□□□□ -1.68
LEMD3-204ENST00000542032 RAD54BQ9Y620 910 aa4.57□□□□□ -1.68
LEMD3-204ENST00000542032 A0A088AWK7 358 aa4.56□□□□□ -1.68
LEMD3-204ENST00000542032 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.56□□□□□ -1.68
LEMD3-204ENST00000542032 LOC102724159A0A0B4J2E5 919 aa4.56□□□□□ -1.68
LEMD3-204ENST00000542032 GCOM1H8Y6P7 765 aaPredicted RBP4.56□□□□□ -1.68
LEMD3-204ENST00000542032 M0QYG6 137 aa4.56□□□□□ -1.68
LEMD3-204ENST00000542032 DCLK1O15075 740 aa4.56□□□□□ -1.68
LEMD3-204ENST00000542032 AKAP10O43572 662 aa4.56□□□□□ -1.68
LEMD3-204ENST00000542032 VPS4BO75351 444 aa4.56□□□□□ -1.68
LEMD3-204ENST00000542032 GNAI2P04899 355 aa4.56□□□□□ -1.68
LEMD3-204ENST00000542032 HDCP19113 662 aa4.56□□□□□ -1.68
LEMD3-204ENST00000542032 ITGALP20701 1170 aa4.56□□□□□ -1.68
LEMD3-204ENST00000542032 GCLCP48506 637 aaPredicted RBP4.56□□□□□ -1.68
LEMD3-204ENST00000542032 ZNF134P52741 427 aa4.56□□□□□ -1.68
LEMD3-204ENST00000542032 SOX8P57073 446 aa4.56□□□□□ -1.68
LEMD3-204ENST00000542032 EXOSC9Q06265 439 aaKnown RBP4.56□□□□□ -1.68
LEMD3-204ENST00000542032 PWP2Q15269 919 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms