RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 SEPT5Q99719 369 aaPredicted RBP11.17□□□□□ -0.62
CDCA3-208ENST00000540683 EXOC1Q9NV70 894 aa11.17□□□□□ -0.62
CDCA3-208ENST00000540683 HSPBP1Q9NZL4 362 aa11.17□□□□□ -0.62
CDCA3-208ENST00000540683 PCDHA7Q9UN72 937 aa11.17□□□□□ -0.62
CDCA3-208ENST00000540683 CACNA1HO95180 2353 aa11.17□□□□□ -0.62
CDCA3-208ENST00000540683 ANK1P16157 1881 aa11.17□□□□□ -0.62
CDCA3-208ENST00000540683 A0A087X0B3 334 aa11.16□□□□□ -0.62
CDCA3-208ENST00000540683 KRBA1A5PL33 1030 aa11.16□□□□□ -0.62
CDCA3-208ENST00000540683 H0Y858 1186 aa11.16□□□□□ -0.62
CDCA3-208ENST00000540683 P4HA1P13674 534 aa11.16□□□□□ -0.62
CDCA3-208ENST00000540683 NPR3P17342 541 aa11.16□□□□□ -0.62
CDCA3-208ENST00000540683 CEBPBP17676 345 aa11.16□□□□□ -0.62
CDCA3-208ENST00000540683 TNNI1P19237 187 aa11.16□□□□□ -0.62
CDCA3-208ENST00000540683 IGFBP6P24592 240 aaPredicted RBP11.16□□□□□ -0.62
CDCA3-208ENST00000540683 RPS9P46781 194 aaKnown RBP11.16□□□□□ -0.62
CDCA3-208ENST00000540683 GUCY2FP51841 1108 aa11.16□□□□□ -0.62
CDCA3-208ENST00000540683 KCNA1Q09470 495 aa11.16□□□□□ -0.62
CDCA3-208ENST00000540683 BFSP1Q12934 665 aa11.16□□□□□ -0.62
CDCA3-208ENST00000540683 PDAP1Q13442 181 aaKnown RBP11.16□□□□□ -0.62
CDCA3-208ENST00000540683 TRPC3Q13507 836 aa11.16□□□□□ -0.62
CDCA3-208ENST00000540683 ANGPT1Q15389 498 aa11.16□□□□□ -0.62
CDCA3-208ENST00000540683 KNOP1Q1ED39 458 aaKnown RBP11.16□□□□□ -0.62
CDCA3-208ENST00000540683 BMT2Q1RMZ1 405 aa11.16□□□□□ -0.62
CDCA3-208ENST00000540683 SLC5A9Q2M3M2 681 aa11.16□□□□□ -0.62
CDCA3-208ENST00000540683 DNAJB7Q7Z6W7 309 aaPredicted RBP11.16□□□□□ -0.62
CDCA3-208ENST00000540683 MFSD6LQ8IWD5 586 aa11.16□□□□□ -0.62
CDCA3-208ENST00000540683 EFCAB13Q8IY85 973 aa11.16□□□□□ -0.62
CDCA3-208ENST00000540683 ZSCAN18Q8TBC5 510 aaPredicted RBP11.16□□□□□ -0.62
CDCA3-208ENST00000540683 NKD2Q969F2 451 aaPredicted RBP11.16□□□□□ -0.62
CDCA3-208ENST00000540683 SAAL1Q96ER3 474 aa11.16□□□□□ -0.62
CDCA3-208ENST00000540683 KXD1Q9BQD3 176 aa11.16□□□□□ -0.62
CDCA3-208ENST00000540683 ATXN3LQ9H3M9 355 aa11.16□□□□□ -0.62
CDCA3-208ENST00000540683 SMOC2Q9H3U7 446 aa11.16□□□□□ -0.62
CDCA3-208ENST00000540683 PCIF1Q9H4Z3 704 aa11.16□□□□□ -0.62
CDCA3-208ENST00000540683 C8orf33Q9H7E9 229 aaPredicted RBP11.16□□□□□ -0.62
CDCA3-208ENST00000540683 KIF9Q9HAQ2 790 aa11.16□□□□□ -0.62
CDCA3-208ENST00000540683 INTS13Q9NVM9 706 aa11.16□□□□□ -0.62
CDCA3-208ENST00000540683 CEP72Q9P209 647 aa11.16□□□□□ -0.62
CDCA3-208ENST00000540683 HOOK1Q9UJC3 728 aaKnown RBP11.16□□□□□ -0.62
CDCA3-208ENST00000540683 FBXO4Q9UKT5 387 aa11.16□□□□□ -0.62
CDCA3-208ENST00000540683 TISP43B9A030 160 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 SPTLC1O15269 473 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 CHADO15335 359 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 LAMTOR5O43504 91 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 EXOC3O60645 756 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 ATICP31939 592 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 AVPR1AP37288 418 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 CASP5P51878 434 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 NRLP54845 237 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 TNNC1P63316 161 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 DNM1Q05193 864 aaKnown RBP11.15□□□□□ -0.62
CDCA3-208ENST00000540683 SNW1Q13573 536 aaKnown RBP11.15□□□□□ -0.62
CDCA3-208ENST00000540683 LRRC32Q14392 662 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 UBXN2BQ14CS0 331 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 ZNF528Q3MIS6 628 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 CFAP221Q4G0U5 840 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 ARHGAP29Q52LW3 1261 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 FAM78AQ5JUQ0 283 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 FOXD4L5Q5VV16 416 aaPredicted RBP11.15□□□□□ -0.62
CDCA3-208ENST00000540683 WSCD1Q658N2 575 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 EPM2AIP1Q7L775 607 aaPredicted RBP11.15□□□□□ -0.62
CDCA3-208ENST00000540683 SPATA2LQ8IUW3 424 aaPredicted RBP11.15□□□□□ -0.62
CDCA3-208ENST00000540683 C1orf210Q8IVY1 113 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 ADGRF2Q8IZF7 708 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 C1orf127Q8N9H9 656 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 ATAD1Q8NBU5 361 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 CCDC26Q8TAB7 109 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 TMEM174Q8WUU8 243 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 FOXD4L4Q8WXT5 416 aaPredicted RBP11.15□□□□□ -0.62
CDCA3-208ENST00000540683 MRPS31Q92665 395 aaKnown RBP11.15□□□□□ -0.62
CDCA3-208ENST00000540683 SYAP1Q96A49 352 aaPredicted RBP11.15□□□□□ -0.62
CDCA3-208ENST00000540683 HPDLQ96IR7 371 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 CBWD1Q9BRT8 395 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 DDX23Q9BUQ8 820 aaKnown RBP11.15□□□□□ -0.62
CDCA3-208ENST00000540683 FAM126AQ9BYI3 521 aaPredicted RBP11.15□□□□□ -0.62
CDCA3-208ENST00000540683 MTMR12Q9C0I1 747 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 TASP1Q9H6P5 420 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 PDE11AQ9HCR9 933 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 AGPAT3Q9NRZ7 376 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 DDX43Q9NXZ2 648 aaKnown RBP11.15□□□□□ -0.62
CDCA3-208ENST00000540683 ABI2Q9NYB9 513 aaPredicted RBP11.15□□□□□ -0.62
CDCA3-208ENST00000540683 CDH9Q9ULB4 789 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 SNX9Q9Y5X1 595 aa11.15□□□□□ -0.62
CDCA3-208ENST00000540683 ATP8B3O60423 1300 aa11.14□□□□□ -0.63
CDCA3-208ENST00000540683 MIA3Q5JRA6 1907 aa11.14□□□□□ -0.63
CDCA3-208ENST00000540683 A0A1W2PRU2 124 aa11.14□□□□□ -0.63
CDCA3-208ENST00000540683 GOLGA8IPA6NC78 632 aa11.14□□□□□ -0.63
CDCA3-208ENST00000540683 GOLGA6L4A6NEF3 574 aa11.14□□□□□ -0.63
CDCA3-208ENST00000540683 GOLGA8JA6NMD2 632 aa11.14□□□□□ -0.63
CDCA3-208ENST00000540683 FAM170BA6NMN3 283 aa11.14□□□□□ -0.63
CDCA3-208ENST00000540683 PPEF2O14830 753 aa11.14□□□□□ -0.63
CDCA3-208ENST00000540683 GFRA3O60609 400 aa11.14□□□□□ -0.63
CDCA3-208ENST00000540683 PHACTR2O75167 634 aa11.14□□□□□ -0.63
CDCA3-208ENST00000540683 OR4Q2P0C623 313 aa11.14□□□□□ -0.63
CDCA3-208ENST00000540683 HAPLN1P10915 354 aaPredicted RBP11.14□□□□□ -0.63
CDCA3-208ENST00000540683 PFKLP17858 780 aa11.14□□□□□ -0.63
CDCA3-208ENST00000540683 RPL13P26373 211 aaKnown RBP11.14□□□□□ -0.63
CDCA3-208ENST00000540683 ANXA13P27216 316 aa11.14□□□□□ -0.63
CDCA3-208ENST00000540683 GABRR2P28476 465 aa11.14□□□□□ -0.63
CDCA3-208ENST00000540683 MAGEA11P43364 429 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms