RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 CETN2P41208 172 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 ZNF165P49910 485 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 ZNF135P52742 658 aaPredicted RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 MRPS5P82675 430 aaKnown RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 TYRO3Q06418 890 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 PNOCQ13519 176 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 IFI16Q16666 785 aaKnown RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 EXOC3L4Q17RC7 722 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 PAN2Q504Q3 1202 aaKnown RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 FAM171A1Q5VUB5 890 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 C9orf57Q5W0N0 161 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 KLHL10Q6JEL2 608 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 TMEM184AQ6ZMB5 413 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 TRAPPC11Q7Z392 1133 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 ZDHHC17Q8IUH5 632 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 VPS52Q8N1B4 723 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 PDCL2Q8N4E4 241 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 SMG8Q8ND04 991 aaKnown RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 MYRIPQ8NFW9 859 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 PARD3BQ8TEW8 1205 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 POF1BQ8WVV4 589 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 RIN2Q8WYP3 895 aaPredicted RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 BSNDQ8WZ55 320 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 SENP8Q96LD8 212 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 UIMC1Q96RL1 719 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 TCF25Q9BQ70 676 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 SRRTQ9BXP5 876 aaKnown RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 ZNF518BQ9C0D4 1074 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 OBP2AQ9NY56 170 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 LSM7Q9UK45 103 aaKnown RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 FBXL5Q9UKA1 691 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 PLAGL2Q9UPG8 496 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 PRG3Q9Y2Y8 225 aaPredicted RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 ARIH1Q9Y4X5 557 aaPredicted RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 MRPL42Q9Y6G3 142 aaKnown RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 FRMPD3Q5JV73 1810 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 A0A1W2PQC6 194 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 TRIM64CA6NLI5 447 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 SFI1A8K8P3 1242 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 KLRC4O43908 158 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 OAZ2O95190 189 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 VDRP11473 427 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 PTPN2P17706 415 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 FGFR3P22607 806 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 STAT1P42224 750 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 SLC11A1P49279 550 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 GPR17Q13304 367 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 PPP2R5DQ14738 602 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 DUSP6Q16828 381 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 DCAF17Q5H9S7 520 aaPredicted RBP3.8□□□□□ -1.8
PTPN22-211ENST00000538253 HHATQ5VTY9 493 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 TDRD10Q5VZ19 366 aaKnown RBP3.8□□□□□ -1.8
PTPN22-211ENST00000538253 EEF1DP3Q658K8 133 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 FAM117BQ6P1L5 589 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 YAF2Q8IY57 180 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 C10orf67Q8IYJ2 551 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 ADGRF2Q8IZF7 708 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 DEFB123Q8N688 67 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 MRPL43Q8N983 215 aaKnown RBP3.8□□□□□ -1.8
PTPN22-211ENST00000538253 PPP1R16BQ96T49 567 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 MMS19Q96T76 1030 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 MED10Q9BTT4 135 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 CENPOQ9BU64 300 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 ZBP1Q9H171 429 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 MUC3BQ9H195 1237 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 WDR6Q9NNW5 1121 aaKnown RBP3.8□□□□□ -1.8
PTPN22-211ENST00000538253 PLCB1Q9NQ66 1216 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 RAB20Q9NX57 234 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.8□□□□□ -1.8
PTPN22-211ENST00000538253 IGSF9Q9P2J2 1179 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 BARX2Q9UMQ3 279 aaPredicted RBP3.8□□□□□ -1.8
PTPN22-211ENST00000538253 USP20Q9Y2K6 914 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 ANO9A1A5B4 782 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 FSCN2O14926 492 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 TPPPO94811 219 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 POMCP01189 267 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 CXCL8P10145 99 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 SLC2A3P11169 496 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 MYCLP1P12525 358 aaPredicted RBP3.8□□□□□ -1.8
PTPN22-211ENST00000538253 WEE1P30291 646 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 GBP1P32455 592 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 GNL1P36915 607 aaPredicted RBP3.8□□□□□ -1.8
PTPN22-211ENST00000538253 CLDN10P78369 228 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 SNW1Q13573 536 aaKnown RBP3.8□□□□□ -1.8
PTPN22-211ENST00000538253 MBTPS1Q14703 1052 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 ENOX2Q16206 610 aaKnown RBP3.8□□□□□ -1.8
PTPN22-211ENST00000538253 ECM1Q16610 540 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 LONRF1Q17RB8 773 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 ZACNQ401N2 412 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 SGO2Q562F6 1265 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 TMEM63BQ5T3F8 832 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 RSPO2Q6UXX9 243 aaPredicted RBP3.8□□□□□ -1.8
PTPN22-211ENST00000538253 TOGARAM2Q6ZUX3 1019 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 KSR1Q8IVT5 923 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 SUGP1Q8IWZ8 645 aaKnown RBP3.8□□□□□ -1.8
PTPN22-211ENST00000538253 TCEAL8Q8IYN2 117 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 MYO1HQ8N1T3 1032 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 LSM14AQ8ND56 463 aaKnown RBP3.8□□□□□ -1.8
PTPN22-211ENST00000538253 EHBP1Q8NDI1 1231 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 SPPL3Q8TCT6 385 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms