RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 ASS1P00966 412 aaKnown RBP9.19□□□□□ -0.94
UBE3B-208ENST00000538070 PDGFRBP09619 1106 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 GHRHRQ02643 423 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 PDIA2Q13087 525 aaKnown RBP9.19□□□□□ -0.94
UBE3B-208ENST00000538070 TFDP1Q14186 410 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 TTLL4Q14679 1199 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 PRAMEF19Q5SWL8 479 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 CELF3Q5SZQ8 465 aaKnown RBP9.19□□□□□ -0.94
UBE3B-208ENST00000538070 MAP1SQ66K74 1059 aaPredicted RBP9.19□□□□□ -0.94
UBE3B-208ENST00000538070 CYP4X1Q8N118 509 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.19□□□□□ -0.94
UBE3B-208ENST00000538070 FAM81BQ96LP2 452 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 CDT1Q9H211 546 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 KIF9Q9HAQ2 790 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 KLK14Q9P0G3 267 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 KCNG1Q9UIX4 513 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 KAT6AQ92794 2004 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 RASA4BC9J798 803 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 RASA4O43374 803 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 TRAPPC3O43617 180 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 CYP1A1P04798 512 aaPredicted RBP9.19□□□□□ -0.94
UBE3B-208ENST00000538070 MYBL1P10243 752 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 SLC1A1P43005 524 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 MMRN1Q13201 1228 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 MXD4Q14582 209 aaPredicted RBP9.19□□□□□ -0.94
UBE3B-208ENST00000538070 SEPT7Q16181 437 aaKnown RBP9.19□□□□□ -0.94
UBE3B-208ENST00000538070 SPRED3Q2MJR0 410 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 MPZL3Q6UWV2 235 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 C15orf39Q6ZRI6 1047 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 TAOK1Q7L7X3 1001 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 PNMA8AQ86V59 439 aaPredicted RBP9.19□□□□□ -0.94
UBE3B-208ENST00000538070 ERO1BQ86YB8 467 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 ANKRD13AQ8IZ07 590 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.19□□□□□ -0.94
UBE3B-208ENST00000538070 TCP11Q8WWU5 503 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 KIF12Q96FN5 646 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 CCDC77Q9BR77 488 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 MAK16Q9BXY0 300 aaKnown RBP9.19□□□□□ -0.94
UBE3B-208ENST00000538070 LRRC19Q9H756 370 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 ADARB2Q9NS39 739 aaKnown RBP9.19□□□□□ -0.94
UBE3B-208ENST00000538070 NINJ2Q9NZG7 142 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 NEU2Q9Y3R4 380 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 TJP3O95049 919 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 ITIH2P19823 946 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 OSBPP22059 807 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 RTP1P59025 263 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 C15orf59Q2T9L4 293 aaPredicted RBP9.18□□□□□ -0.94
UBE3B-208ENST00000538070 PTPN20Q4JDL3 420 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 NPNTQ6UXI9 565 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 EXOC3L1Q86VI1 746 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 KIAA0319LQ8IZA0 1049 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 MAIP1Q8WWC4 291 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 LENG1Q96BZ8 264 aaPredicted RBP9.18□□□□□ -0.94
UBE3B-208ENST00000538070 FAM167AQ96KS9 214 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 RUNDC3BQ96NL0 473 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 TRAIPQ9BWF2 469 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 TRIM6Q9C030 488 aaPredicted RBP9.18□□□□□ -0.94
UBE3B-208ENST00000538070 NKIRAS1Q9NYS0 192 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 SNX9Q9Y5X1 595 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 H7C0C1 242 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 CALB1P05937 261 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 PECAM1P16284 738 aaPredicted RBP9.18□□□□□ -0.94
UBE3B-208ENST00000538070 MAGEA4P43358 317 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 ATP5OP48047 213 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 HADHBP55084 474 aaKnown RBP9.18□□□□□ -0.94
UBE3B-208ENST00000538070 BSPRYQ5W0U4 402 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 SPOCD1Q6ZMY3 1216 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 ARMCX2Q7L311 632 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 CEP57Q86XR8 500 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 ZNF677Q86XU0 584 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 WDR49Q8IV35 697 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 FAM71DQ8N9W8 422 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 ACTL9Q8TC94 416 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 KAT2BQ92831 832 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 CPXM1Q96SM3 734 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 ADPGKQ9BRR6 497 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 NIFKQ9BYG3 293 aaKnown RBP9.18□□□□□ -0.94
UBE3B-208ENST00000538070 C12orf65Q9H3J6 166 aaKnown RBP9.18□□□□□ -0.94
UBE3B-208ENST00000538070 SMARCAD1Q9H4L7 1026 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 AAASQ9NRG9 546 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 SETD4Q9NVD3 440 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.18□□□□□ -0.94
UBE3B-208ENST00000538070 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.18□□□□□ -0.94
UBE3B-208ENST00000538070 A6NNZ2 444 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 HCRTO43612 131 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 RNF8O76064 485 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 MMP8P22894 467 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 OTUD4Q01804 1114 aaKnown RBP9.18□□□□□ -0.94
UBE3B-208ENST00000538070 TUBB8Q3ZCM7 444 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 CCDC197Q8NCU1 140 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 AVENQ9NQS1 362 aaPredicted RBP9.18□□□□□ -0.94
UBE3B-208ENST00000538070 HOMER3Q9NSC5 361 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 HAUS2Q9NVX0 235 aa9.18□□□□□ -0.94
UBE3B-208ENST00000538070 MAGED2Q9UNF1 606 aaPredicted RBP9.18□□□□□ -0.94
UBE3B-208ENST00000538070 MRPL42Q9Y6G3 142 aaKnown RBP9.18□□□□□ -0.94
UBE3B-208ENST00000538070 MTA2O94776 668 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 TTC4O95801 387 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 DPY19L2Q6NUT2 758 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 TRIM72Q6ZMU5 477 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 ACOT1Q86TX2 421 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms