RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 RPRD1AQ96P16 312 aaPredicted RBP11.83□□□□□ -0.52
PTPRK-221ENST00000532331 CGRRF1Q99675 332 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 MRPL17Q9NRX2 175 aaKnown RBP11.83□□□□□ -0.52
PTPRK-221ENST00000532331 RRP15Q9Y3B9 282 aaKnown RBP11.83□□□□□ -0.52
PTPRK-221ENST00000532331 A0A0G2JND7 137 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 YDJCA8MPS7 323 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 MRPS6P82932 125 aaKnown RBP11.83□□□□□ -0.52
PTPRK-221ENST00000532331 POLD3Q15054 466 aaPredicted RBP11.83□□□□□ -0.52
PTPRK-221ENST00000532331 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.83□□□□□ -0.52
PTPRK-221ENST00000532331 ZNF677Q86XU0 584 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 HERC6Q8IVU3 1022 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 PPHLN1Q8NEY8 458 aaKnown RBP11.83□□□□□ -0.52
PTPRK-221ENST00000532331 COPS5Q92905 334 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 CDY2AQ9Y6F7 541 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 FMN2Q9NZ56 1722 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 TMEM247A6NEH6 219 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 AP3B1O00203 1094 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 RALBP11234 206 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 PREPLQ4J6C6 727 aaPredicted RBP11.83□□□□□ -0.52
PTPRK-221ENST00000532331 RASSF3Q86WH2 238 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 DDI1Q8WTU0 396 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 SNX19Q92543 992 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 CDK5RAP1Q96SZ6 601 aaKnown RBP11.83□□□□□ -0.52
PTPRK-221ENST00000532331 ELAC2Q9BQ52 826 aaKnown RBP11.83□□□□□ -0.52
PTPRK-221ENST00000532331 A0A1B0GTH6 734 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 UCHL3P15374 230 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 MEI1Q5TIA1 1274 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 ARMC6Q6NXE6 501 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 ZBED8Q8IZ13 594 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 FOPNLQ96NB1 174 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 KIF2CQ99661 725 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 ATXN3LQ9H3M9 355 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 KRT82Q9NSB4 513 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 THEGQ9P2T0 379 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 UVRAGQ9P2Y5 699 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 PPARGC1AQ9UBK2 798 aaKnown RBP11.83□□□□□ -0.52
PTPRK-221ENST00000532331 TMCC1O94876 653 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 FARP2O94887 1054 aaPredicted RBP11.82□□□□□ -0.52
PTPRK-221ENST00000532331 EIF3EP60228 445 aaKnown RBP11.82□□□□□ -0.52
PTPRK-221ENST00000532331 PHEXP78562 749 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 LAMB3Q13751 1172 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 WDR49Q8IV35 697 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 WDCPQ9H6R7 721 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.82□□□□□ -0.52
PTPRK-221ENST00000532331 GTSE1Q9NYZ3 720 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.82□□□□□ -0.52
PTPRK-221ENST00000532331 TSR3Q9UJK0 312 aaKnown RBP11.82□□□□□ -0.52
PTPRK-221ENST00000532331 ANGPTL2Q9UKU9 493 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 ITGA11Q9UKX5 1188 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 SLC30A1Q9Y6M5 507 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 ATRNO75882 1429 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 CXCL8P10145 99 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 STARD3Q14849 445 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 IZUMO3Q5VZ72 239 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 RASGRP2Q7LDG7 609 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 RCOR2Q8IZ40 523 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 C1orf54Q8WWF1 131 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 ANKS1AQ92625 1134 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 PDGFDQ9GZP0 370 aaPredicted RBP11.82□□□□□ -0.52
PTPRK-221ENST00000532331 IL25Q9H293 177 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 SLC28A3Q9HAS3 691 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 CHST12Q9NRB3 414 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 DDIT4Q9NX09 232 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 HDAC6Q9UBN7 1215 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 SPECC1L-ADORA2AF8WAN1 911 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 VDRP11473 427 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 SLC18A3Q16572 532 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 MDH1BQ5I0G3 518 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 TMCO4Q5TGY1 634 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 USP49Q70CQ1 688 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 CARNMT1Q8N4J0 409 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 RNF217Q8TC41 542 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 PPP1R2P1Q96PQ5 205 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 DDX43Q9NXZ2 648 aaKnown RBP11.82□□□□□ -0.52
PTPRK-221ENST00000532331 GUCY2CP25092 1073 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 SOX10P56693 466 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 CREMQ03060 361 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 ANGPTL8Q6UXH0 198 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 TRAPPC11Q7Z392 1133 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 SLC5A5Q92911 643 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 RNPC3Q96LT9 517 aaKnown RBP11.82□□□□□ -0.52
PTPRK-221ENST00000532331 CINPQ9BW66 212 aaPredicted RBP11.82□□□□□ -0.52
PTPRK-221ENST00000532331 HIPK3Q9H422 1215 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 TLR8Q9NR97 1041 aaKnown RBP11.82□□□□□ -0.52
PTPRK-221ENST00000532331 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.82□□□□□ -0.52
PTPRK-221ENST00000532331 ZNF197O14709 1029 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 ATP9BO43861 1147 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 EFCAB14O75071 495 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 ASS1P00966 412 aaKnown RBP11.82□□□□□ -0.52
PTPRK-221ENST00000532331 STMN1P16949 149 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 POU5F1BQ06416 359 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 RASIP1Q5U651 963 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 CBWD2Q8IUF1 395 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 C7orf61Q8IZ16 206 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 CENPKQ9BS16 269 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 UXTQ9UBK9 157 aaPredicted RBP11.82□□□□□ -0.52
PTPRK-221ENST00000532331 PLA2G4CQ9UP65 541 aa11.82□□□□□ -0.52
PTPRK-221ENST00000532331 ITIH6Q6UXX5 1313 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 SSU72P8A0A1W2PR75 194 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 MAP4P27816 1152 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms