RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 SH2B1Q9NRF2 756 aaPredicted RBP5.62□□□□□ -1.51
ECHDC1-222ENST00000531967 SACM1LQ9NTJ5 587 aa5.62□□□□□ -1.51
ECHDC1-222ENST00000531967 ZBTB40Q9NUA8 1239 aa5.62□□□□□ -1.51
ECHDC1-222ENST00000531967 SUCLA2Q9P2R7 463 aaPredicted RBP5.62□□□□□ -1.51
ECHDC1-222ENST00000531967 DPP7Q9UHL4 492 aa5.62□□□□□ -1.51
ECHDC1-222ENST00000531967 SESN1Q9Y6P5 492 aa5.62□□□□□ -1.51
ECHDC1-222ENST00000531967 FAM47E-STBD1D6RA91 191 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 CSPG5O95196 566 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 EPN2O95208 641 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 TRIM16O95361 564 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 IFNB1P01574 187 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 PRKCBP05771 671 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 TSPY4P0CV99 314 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 TSPY10P0CW01 314 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 ITIH2P19823 946 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 AMPHP49418 695 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 AFF1P51825 1210 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 COG7P83436 770 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 NOGQ13253 232 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 SUPT20HL1Q3ZLR7 823 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 FAXCQ5TGI0 409 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 AFAP1Q8N556 730 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 PCSK9Q8NBP7 692 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 FBXO15Q8NCQ5 510 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 FIBINQ8TAL6 211 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 NOC3LQ8WTT2 800 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 SDCCAG3Q96C92 435 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 LRRC46Q96FV0 321 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 SUCLG2Q96I99 432 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 P2RX7Q99572 595 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 MTRQ99707 1265 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 MUC13Q9H3R2 512 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 DNAJC18Q9H819 358 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 EXOC1Q9NV70 894 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 NINJ2Q9NZG7 142 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 SELENONQ9NZV5 590 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 SEPT10Q9P0V9 454 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 PIN4Q9Y237 131 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 LYVE1Q9Y5Y7 322 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 SPAG9O60271 1321 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 PEG3Q9GZU2 1588 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 A4D1N5 150 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 CLCA1A8K7I4 914 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 A8MV72 311 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 RNF225M0QZC1 329 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 SMNDC1O75940 238 aaKnown RBP eCLIP5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 F9P00740 461 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 ARF4P18085 180 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 EN2P19622 333 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 KCNA5P22460 613 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 NOS3P29474 1203 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 JAM2P57087 298 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 RPS3AP61247 264 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 RING1Q06587 406 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 POU4F2Q12837 409 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 BMPR2Q13873 1038 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 ERMARDQ5T6L9 678 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 DRICH1Q6PGQ1 229 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 C15orf52Q6ZUT6 534 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 TMC6Q7Z403 805 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 OSTM1Q86WC4 334 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 SPATA2LQ8IUW3 424 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 TUSC5Q8IXB3 177 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 PEX5LQ8IYB4 626 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 CYB5D2Q8WUJ1 264 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 HDAC10Q969S8 669 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 LRRC59Q96AG4 307 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 TUBGCP3Q96CW5 907 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 PDLIM5Q96HC4 596 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 BRD8Q9H0E9 1235 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 CD93Q9NPY3 652 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 CPA4Q9UI42 421 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 HS3ST4Q9Y661 456 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 ZNF804BA4D1E1 1349 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 A0A1B0GTH6 734 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 A0A1W2PQ09 198 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 GOLGA8CPA6NN73 597 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 KCNK3O14649 394 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 PEX11AO75192 247 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 BCAS2O75934 225 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 FTCDO95954 541 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 ANXA1P04083 346 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 CPA2P48052 419 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 DEUP1Q05D60 604 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 CUL2Q13617 745 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 AMOTQ4VCS5 1084 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 FAM117BQ6P1L5 589 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 CYP20A1Q6UW02 462 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 RABEPKQ7Z6M1 372 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 AGGF1Q8N302 714 aaeCLIP5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 HDDC3Q8N4P3 179 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 USP38Q8NB14 1042 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 OR6Y1Q8NGX8 325 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 ZNF516Q92618 1163 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 FAM162AQ96A26 154 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 NACC2Q96BF6 587 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 PRAM1Q96QH2 718 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 TACO1Q9BSH4 297 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 APOL6Q9BWW8 343 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 PRDM12Q9H4Q4 367 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms