RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, human

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-222	ENST00000531551	CALCA	P01258	141 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	FAM163B	P0C2L3	166 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	PSMD5	Q16401	504 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	SFMBT2	Q5VUG0	894 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	UNC93A	Q86WB7	457 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	CNGA4	Q8IV77	575 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	GLYCTK	Q8IVS8	523 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	LNX1	Q8TBB1	728 aa	Predicted RBP	18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	TMEM176A	Q96HP8	235 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	HEXIM2	Q96MH2	286 aa	Known RBP	18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	TCF25	Q9BQ70	676 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	RTP3	Q9BQQ7	232 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	ACP6	Q9NPH0	428 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	MRPL17	Q9NRX2	175 aa	Known RBP	18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	IMPACT	Q9P2X3	320 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	GBF1	Q92538	1859 aa		18.81	■□□□□ 0.6
CTSB-222	ENST00000531551		H3BNC9	293 aa		18.81	■□□□□ 0.6
CTSB-222	ENST00000531551		H7C4K7	107 aa		18.81	■□□□□ 0.6
CTSB-222	ENST00000531551	ATP2C2	O75185	946 aa		18.81	■□□□□ 0.6
CTSB-222	ENST00000531551	OAZ2	O95190	189 aa		18.81	■□□□□ 0.6
CTSB-222	ENST00000531551	CD19	P15391	556 aa		18.81	■□□□□ 0.6
CTSB-222	ENST00000531551	RPL17	P18621	184 aa	Known RBP	18.81	■□□□□ 0.6
CTSB-222	ENST00000531551	DNAJB1	P25685	340 aa		18.81	■□□□□ 0.6
CTSB-222	ENST00000531551	PCSK1	P29120	753 aa		18.81	■□□□□ 0.6
CTSB-222	ENST00000531551	RAD23B	P54727	409 aa		18.81	■□□□□ 0.6
CTSB-222	ENST00000531551	DSG1	Q02413	1049 aa		18.81	■□□□□ 0.6
CTSB-222	ENST00000531551	ASIC2	Q16515	512 aa		18.81	■□□□□ 0.6
CTSB-222	ENST00000531551	TSR1	Q2NL82	804 aa	Known RBP	18.81	■□□□□ 0.6
CTSB-222	ENST00000531551	FAM71A	Q8IYT1	594 aa		18.81	■□□□□ 0.6
CTSB-222	ENST00000531551	OR10T2	Q8NGX3	314 aa		18.81	■□□□□ 0.6
CTSB-222	ENST00000531551	SPATA18	Q8TC71	538 aa		18.81	■□□□□ 0.6
CTSB-222	ENST00000531551	TNIP3	Q96KP6	325 aa		18.81	■□□□□ 0.6
CTSB-222	ENST00000531551	TMEM209	Q96SK2	561 aa		18.81	■□□□□ 0.6
CTSB-222	ENST00000531551	LPIN3	Q9BQK8	851 aa		18.81	■□□□□ 0.6
CTSB-222	ENST00000531551	SYT15	Q9BQS2	421 aa		18.81	■□□□□ 0.6
CTSB-222	ENST00000531551	DNAI2	Q9GZS0	605 aa		18.81	■□□□□ 0.6
CTSB-222	ENST00000531551	ZBP1	Q9H171	429 aa		18.81	■□□□□ 0.6
CTSB-222	ENST00000531551	KIAA1671	Q9BY89	1806 aa		18.81	■□□□□ 0.6
CTSB-222	ENST00000531551	CXCL14	O95715	111 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	OR4Q2	P0C623	313 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	ERVFC1	P60507	584 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	TSPY1	Q01534	308 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	MRPL58	Q14197	206 aa	Known RBP	18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	BMS1	Q14692	1282 aa	Known RBP	18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	KIAA0319	Q5VV43	1072 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	PLPP4	Q5VZY2	271 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	SLC4A11	Q8NBS3	891 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	OR8K1	Q8NGG5	319 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	GDPD5	Q8WTR4	605 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	ACBD6	Q9BR61	282 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	NUCKS1	Q9H1E3	243 aa	Known RBP	18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	FAM124B	Q9H5Z6	455 aa	Predicted RBP	18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	TLR9	Q9NR96	1032 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	MYO6	Q9UM54	1294 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	LZTS1	Q9Y250	596 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	CDH23	Q9H251	3354 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	RFXAP	O00287	272 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	CTSA	P10619	480 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	CLCN1	P35523	988 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	UBE3A	Q05086	875 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	PTK2	Q05397	1052 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	SLC47A2	Q86VL8	602 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	C12orf29	Q8N999	325 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	PIK3R5	Q8WYR1	880 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	ABHD10	Q9NUJ1	306 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	GTF3C4	Q9UKN8	822 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	CDH9	Q9ULB4	789 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	CNTN6	Q9UQ52	1028 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	CDY1	Q9Y6F8	540 aa		18.8	■□□□□ 0.6
CTSB-222	ENST00000531551	CHD9	Q3L8U1	2897 aa		18.79	■□□□□ 0.6
CTSB-222	ENST00000531551	CHD7	Q9P2D1	2997 aa		18.79	■□□□□ 0.6
CTSB-222	ENST00000531551	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	18.79	■□□□□ 0.6
CTSB-222	ENST00000531551	CPB1	P15086	417 aa		18.79	■□□□□ 0.6
CTSB-222	ENST00000531551	FER	P16591	822 aa		18.79	■□□□□ 0.6
CTSB-222	ENST00000531551	PTPN1	P18031	435 aa	Known RBP	18.79	■□□□□ 0.6
CTSB-222	ENST00000531551	GNA15	P30679	374 aa		18.79	■□□□□ 0.6
CTSB-222	ENST00000531551	CCDC142	Q17RM4	750 aa		18.79	■□□□□ 0.6
CTSB-222	ENST00000531551	MDH1B	Q5I0G3	518 aa		18.79	■□□□□ 0.6
CTSB-222	ENST00000531551	E4F1	Q66K89	784 aa	Predicted RBP	18.79	■□□□□ 0.6
CTSB-222	ENST00000531551	RSPO2	Q6UXX9	243 aa	Predicted RBP	18.79	■□□□□ 0.6
CTSB-222	ENST00000531551	CCDC186	Q7Z3E2	898 aa		18.79	■□□□□ 0.6
CTSB-222	ENST00000531551	TC2N	Q8N9U0	490 aa		18.79	■□□□□ 0.6
CTSB-222	ENST00000531551	B3GALNT2	Q8NCR0	500 aa		18.79	■□□□□ 0.6
CTSB-222	ENST00000531551	ZNF576	Q9H609	170 aa		18.79	■□□□□ 0.6
CTSB-222	ENST00000531551	FAM49B	Q9NUQ9	324 aa		18.79	■□□□□ 0.6
CTSB-222	ENST00000531551	ZNHIT6	Q9NWK9	470 aa	Known RBP	18.79	■□□□□ 0.6
CTSB-222	ENST00000531551	SSX2IP	Q9Y2D8	614 aa		18.79	■□□□□ 0.6
CTSB-222	ENST00000531551	PCDHGC5	Q9Y5F6	944 aa		18.79	■□□□□ 0.6
CTSB-222	ENST00000531551	MYBPHL	A2RUH7	354 aa		18.78	■□□□□ 0.6
CTSB-222	ENST00000531551	EPOP	A6NHQ4	379 aa		18.78	■□□□□ 0.6
CTSB-222	ENST00000531551	THAP12	O43422	761 aa		18.78	■□□□□ 0.6
CTSB-222	ENST00000531551	LPXN	O60711	386 aa		18.78	■□□□□ 0.6
CTSB-222	ENST00000531551	CCDC172	P0C7W6	258 aa		18.78	■□□□□ 0.6
CTSB-222	ENST00000531551	SKIL	P12757	684 aa		18.78	■□□□□ 0.6
CTSB-222	ENST00000531551	SSTR3	P32745	418 aa	Predicted RBP	18.78	■□□□□ 0.6
CTSB-222	ENST00000531551	PDE6C	P51160	858 aa		18.78	■□□□□ 0.6
CTSB-222	ENST00000531551	ZNF132	P52740	706 aa		18.78	■□□□□ 0.6
CTSB-222	ENST00000531551	ARID5B	Q14865	1188 aa		18.78	■□□□□ 0.6
CTSB-222	ENST00000531551	PTPN14	Q15678	1187 aa		18.78	■□□□□ 0.6
CTSB-222	ENST00000531551	SLC39A12	Q504Y0	691 aa		18.78	■□□□□ 0.6

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