RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 ABCA3Q99758 1704 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 ANKRD62A6NC57 917 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 FCHO1O14526 889 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 SULT1C4O75897 302 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 ESRRBO95718 433 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 FUCA1P04066 466 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 CDH3P22223 829 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 ENTPD1P49961 510 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 KCNH2Q12809 1159 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 ECM1Q16610 540 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 TMEM132AQ24JP5 1023 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 TMEM119Q4V9L6 283 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 ZNF280DQ6N043 979 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 RASGRP4Q8TDF6 673 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 CALML4Q96GE6 196 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 LRGUKQ96M69 825 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 TDRD1Q9BXT4 1180 aaKnown RBP8.54□□□□□ -1.04
CSDE1-214ENST00000530886 SLC2A11Q9BYW1 496 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 SLC24A2Q9UI40 661 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 CCDC160A6NGH7 325 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 H3BSA7 217 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 TNFRSF10AO00220 468 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 KLF11O14901 512 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 NMT2O60551 498 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 CAPN15O75808 1086 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 UQCRFS1P1P0C7P4 283 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 PABPC1P11940 636 aaKnown RBP8.53□□□□□ -1.04
CSDE1-214ENST00000530886 PEX2P28328 305 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 TKTP29401 623 aaKnown RBP8.53□□□□□ -1.04
CSDE1-214ENST00000530886 HMOX2P30519 316 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 HSPA13P48723 471 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 TMED2Q15363 201 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 EPHA7Q15375 998 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 KCNK18Q7Z418 384 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 ADAT2Q7Z6V5 191 aaKnown RBP8.53□□□□□ -1.04
CSDE1-214ENST00000530886 DZIP1Q86YF9 867 aaKnown RBP8.53□□□□□ -1.04
CSDE1-214ENST00000530886 CFAP57Q96MR6 1250 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 COG5Q9UP83 839 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 SORCS3Q9UPU3 1222 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 ALG6Q9Y672 507 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 MYH11P35749 1972 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 RGPD3A6NKT7 1758 aaPredicted RBP8.53□□□□□ -1.04
CSDE1-214ENST00000530886 RGPD4Q7Z3J3 1758 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 SLX4Q8IY92 1834 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 GREB1LQ9C091 1923 aaPredicted RBP8.53□□□□□ -1.04
CSDE1-214ENST00000530886 TRAF5O00463 557 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 PMLP29590 882 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 HOXD13P35453 343 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 CPOXP36551 454 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 NOP14P78316 857 aaKnown RBP8.53□□□□□ -1.04
CSDE1-214ENST00000530886 NCOA4Q13772 614 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 ARSHQ5FYA8 562 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 IFIT1BQ5T764 474 aaKnown RBP8.53□□□□□ -1.04
CSDE1-214ENST00000530886 PGM2L1Q6PCE3 622 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 ZNF34Q8IZ26 560 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 IFNL2Q8IZJ0 200 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 TTC39CQ8N584 583 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 CATSPER1Q8NEC5 780 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 LARP4BQ92615 738 aaKnown RBP8.53□□□□□ -1.04
CSDE1-214ENST00000530886 PRR11Q96HE9 360 aaPredicted RBP8.53□□□□□ -1.04
CSDE1-214ENST00000530886 CDK5RAP3Q96JB5 506 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 PSD2Q9BQI7 771 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 VPS45Q9NRW7 570 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 KCNK4Q9NYG8 393 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 C6orf203Q9P0P8 240 aaPredicted RBP8.53□□□□□ -1.04
CSDE1-214ENST00000530886 TBK1Q9UHD2 729 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 HDAC9Q9UKV0 1011 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 EXOC7Q9UPT5 735 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 ROBO3Q96MS0 1386 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 TRIM64BA6NI03 449 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 FSCN2O14926 492 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 DHRS4L1P0CG22 281 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 ITGA8P53708 1063 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 KRT17Q04695 432 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 CCNIQ14094 377 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 C16orf72Q14CZ0 275 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 PRKD1Q15139 912 aaPredicted RBP8.53□□□□□ -1.04
CSDE1-214ENST00000530886 SF3B3Q15393 1217 aaKnown RBP8.53□□□□□ -1.04
CSDE1-214ENST00000530886 PHKG1Q16816 387 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 LPCAT4Q643R3 524 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 LVRNQ6Q4G3 990 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 TICAM1Q8IUC6 712 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 CENPSQ8N2Z9 138 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 GRK7Q8WTQ7 553 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 ALKBH8Q96BT7 664 aaKnown RBP8.53□□□□□ -1.04
CSDE1-214ENST00000530886 ZNF341Q9BYN7 854 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 KLHL3Q9UH77 587 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 MAD2L2Q9UI95 211 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 SUGT1Q9Y2Z0 365 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 ZNF804BA4D1E1 1349 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 PSME4Q14997 1843 aa8.53□□□□□ -1.04
CSDE1-214ENST00000530886 CCDC194A0A1B0GVG4 234 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 RSPH10B2B2RC85 870 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 RSPH10BP0C881 870 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 THRAP10827 490 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 CA4P22748 312 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 CA8P35219 290 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 STT3AP46977 705 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 TRIM71Q2Q1W2 868 aaKnown RBP8.52□□□□□ -1.05
CSDE1-214ENST00000530886 TPTE2Q6XPS3 522 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms