RNA–Protein interactions for RNA: ENST00000529477.5

PTP4A2-212, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-212ENST00000529477 CDH7Q9ULB5 785 aa20.48■□□□□ 0.87
PTP4A2-212ENST00000529477 L1RE1Q9UN81 338 aa20.48■□□□□ 0.87
PTP4A2-212ENST00000529477 YIPF1Q9Y548 306 aa20.48■□□□□ 0.87
PTP4A2-212ENST00000529477 N4BP1O75113 896 aaKnown RBP20.47■□□□□ 0.87
PTP4A2-212ENST00000529477 PDGFBP01127 241 aaPredicted RBP20.47■□□□□ 0.87
PTP4A2-212ENST00000529477 KRT13P13646 458 aa20.47■□□□□ 0.87
PTP4A2-212ENST00000529477 PCSK1P29120 753 aa20.47■□□□□ 0.87
PTP4A2-212ENST00000529477 TUFMP49411 452 aaKnown RBP20.47■□□□□ 0.87
PTP4A2-212ENST00000529477 STIM1Q13586 685 aa20.47■□□□□ 0.87
PTP4A2-212ENST00000529477 NFE2Q16621 373 aaPredicted RBP20.47■□□□□ 0.87
PTP4A2-212ENST00000529477 NFIL3Q16649 462 aa20.47■□□□□ 0.87
PTP4A2-212ENST00000529477 CENPPQ6IPU0 288 aa20.47■□□□□ 0.87
PTP4A2-212ENST00000529477 PDZD4Q76G19 769 aaPredicted RBP20.47■□□□□ 0.87
PTP4A2-212ENST00000529477 ATAD1Q8NBU5 361 aa20.47■□□□□ 0.87
PTP4A2-212ENST00000529477 LEMD2Q8NC56 503 aa20.47■□□□□ 0.87
PTP4A2-212ENST00000529477 SPPL2BQ8TCT7 592 aa20.47■□□□□ 0.87
PTP4A2-212ENST00000529477 SYAP1Q96A49 352 aaPredicted RBP20.47■□□□□ 0.87
PTP4A2-212ENST00000529477 TMEM209Q96SK2 561 aa20.47■□□□□ 0.87
PTP4A2-212ENST00000529477 TSG101Q99816 390 aa20.47■□□□□ 0.87
PTP4A2-212ENST00000529477 KCNK12Q9HB15 430 aa20.47■□□□□ 0.87
PTP4A2-212ENST00000529477 ASAH2Q9NR71 780 aa20.47■□□□□ 0.87
PTP4A2-212ENST00000529477 DDX43Q9NXZ2 648 aaKnown RBP20.47■□□□□ 0.87
PTP4A2-212ENST00000529477 PCDHA5Q9Y5H7 936 aa20.47■□□□□ 0.87
PTP4A2-212ENST00000529477 H0Y858 1186 aa20.46■□□□□ 0.87
PTP4A2-212ENST00000529477 MAPK13O15264 365 aa20.46■□□□□ 0.87
PTP4A2-212ENST00000529477 GALR2O43603 387 aaPredicted RBP20.46■□□□□ 0.87
PTP4A2-212ENST00000529477 ATICP31939 592 aa20.46■□□□□ 0.87
PTP4A2-212ENST00000529477 CASP4P49662 377 aa20.46■□□□□ 0.87
PTP4A2-212ENST00000529477 UBE2HP62256 183 aa20.46■□□□□ 0.87
PTP4A2-212ENST00000529477 TNNC1P63316 161 aa20.46■□□□□ 0.87
PTP4A2-212ENST00000529477 ADAM9Q13443 819 aa20.46■□□□□ 0.87
PTP4A2-212ENST00000529477 TDGQ13569 410 aa20.46■□□□□ 0.87
PTP4A2-212ENST00000529477 VEPH1Q14D04 833 aa20.46■□□□□ 0.87
PTP4A2-212ENST00000529477 SMYD4Q8IYR2 804 aaPredicted RBP20.46■□□□□ 0.87
PTP4A2-212ENST00000529477 TMC2Q8TDI7 906 aa20.46■□□□□ 0.87
PTP4A2-212ENST00000529477 FGF13Q92913 245 aa20.46■□□□□ 0.87
PTP4A2-212ENST00000529477 ACBD6Q9BR61 282 aa20.46■□□□□ 0.87
PTP4A2-212ENST00000529477 AVENQ9NQS1 362 aaPredicted RBP20.46■□□□□ 0.87
PTP4A2-212ENST00000529477 SLC27A5Q9Y2P5 690 aa20.46■□□□□ 0.87
PTP4A2-212ENST00000529477 LRRIQ3A6PVS8 624 aaPredicted RBP20.45■□□□□ 0.86
PTP4A2-212ENST00000529477 GADD45BO75293 160 aaPredicted RBP20.45■□□□□ 0.86
PTP4A2-212ENST00000529477 PSMC2P35998 433 aaKnown RBP20.45■□□□□ 0.86
PTP4A2-212ENST00000529477 EDRF1Q3B7T1 1238 aa20.45■□□□□ 0.86
PTP4A2-212ENST00000529477 MGAT5BQ3V5L5 792 aa20.45■□□□□ 0.86
PTP4A2-212ENST00000529477 INTS8Q75QN2 995 aaKnown RBP20.45■□□□□ 0.86
PTP4A2-212ENST00000529477 MTSS1LQ765P7 747 aa20.45■□□□□ 0.86
PTP4A2-212ENST00000529477 ITIH5Q86UX2 942 aa20.45■□□□□ 0.86
PTP4A2-212ENST00000529477 ITFG1Q8TB96 612 aa20.45■□□□□ 0.86
PTP4A2-212ENST00000529477 SEPT5Q99719 369 aaPredicted RBP20.45■□□□□ 0.86
PTP4A2-212ENST00000529477 RTP3Q9BQQ7 232 aa20.45■□□□□ 0.86
PTP4A2-212ENST00000529477 ABI2Q9NYB9 513 aaPredicted RBP20.45■□□□□ 0.86
PTP4A2-212ENST00000529477 ASB3Q9Y575 518 aa20.45■□□□□ 0.86
PTP4A2-212ENST00000529477 PCDHB5Q9Y5E4 795 aa20.45■□□□□ 0.86
PTP4A2-212ENST00000529477 ZNF292O60281 2723 aa20.45■□□□□ 0.86
PTP4A2-212ENST00000529477 IKBKBO14920 756 aa20.44■□□□□ 0.86
PTP4A2-212ENST00000529477 CETN3O15182 167 aa20.44■□□□□ 0.86
PTP4A2-212ENST00000529477 CST3P01034 146 aaPredicted RBP20.44■□□□□ 0.86
PTP4A2-212ENST00000529477 PPP1R2P41236 205 aa20.44■□□□□ 0.86
PTP4A2-212ENST00000529477 NBL1P41271 181 aa20.44■□□□□ 0.86
PTP4A2-212ENST00000529477 PRCPP42785 496 aa20.44■□□□□ 0.86
PTP4A2-212ENST00000529477 VAMP7P51809 220 aa20.44■□□□□ 0.86
PTP4A2-212ENST00000529477 CLDN10P78369 228 aa20.44■□□□□ 0.86
PTP4A2-212ENST00000529477 TAF12Q16514 161 aa20.44■□□□□ 0.86
PTP4A2-212ENST00000529477 SOWAHAQ2M3V2 549 aa20.44■□□□□ 0.86
PTP4A2-212ENST00000529477 WDR72Q3MJ13 1102 aa20.44■□□□□ 0.86
PTP4A2-212ENST00000529477 COBLL1Q53SF7 1204 aa20.44■□□□□ 0.86
PTP4A2-212ENST00000529477 ASCL5Q7RTU5 278 aa20.44■□□□□ 0.86
PTP4A2-212ENST00000529477 FAM186BQ8IYM0 893 aa20.44■□□□□ 0.86
PTP4A2-212ENST00000529477 SPATA20Q8TB22 786 aa20.44■□□□□ 0.86
PTP4A2-212ENST00000529477 FAM200AQ8TCP9 573 aa20.44■□□□□ 0.86
PTP4A2-212ENST00000529477 ING5Q8WYH8 240 aa20.44■□□□□ 0.86
PTP4A2-212ENST00000529477 ZNF516Q92618 1163 aa20.44■□□□□ 0.86
PTP4A2-212ENST00000529477 ERCC4Q92889 916 aaPredicted RBP20.44■□□□□ 0.86
PTP4A2-212ENST00000529477 GDE1Q9NZC3 331 aa20.44■□□□□ 0.86
PTP4A2-212ENST00000529477 CEP72Q9P209 647 aa20.44■□□□□ 0.86
PTP4A2-212ENST00000529477 NOTCH4Q99466 2003 aa20.44■□□□□ 0.86
PTP4A2-212ENST00000529477 PRR23AA6NEV1 266 aa20.43■□□□□ 0.86
PTP4A2-212ENST00000529477 PSMA7O14818 248 aa20.43■□□□□ 0.86
PTP4A2-212ENST00000529477 VNN2O95498 520 aa20.43■□□□□ 0.86
PTP4A2-212ENST00000529477 STAU1O95793 577 aaKnown RBP20.43■□□□□ 0.86
PTP4A2-212ENST00000529477 MYL4P12829 197 aa20.43■□□□□ 0.86
PTP4A2-212ENST00000529477 MYL6P60660 151 aa20.43■□□□□ 0.86
PTP4A2-212ENST00000529477 ZNF699Q32M78 642 aa20.43■□□□□ 0.86
PTP4A2-212ENST00000529477 INTS6LQ5JSJ4 861 aaKnown RBP20.43■□□□□ 0.86
PTP4A2-212ENST00000529477 SCARA3Q6AZY7 606 aa20.43■□□□□ 0.86
PTP4A2-212ENST00000529477 NPAS3Q8IXF0 933 aa20.43■□□□□ 0.86
PTP4A2-212ENST00000529477 GZF1Q9H116 711 aaPredicted RBP20.43■□□□□ 0.86
PTP4A2-212ENST00000529477 CRISPLD1Q9H336 500 aa20.43■□□□□ 0.86
PTP4A2-212ENST00000529477 SNX25Q9H3E2 840 aa20.43■□□□□ 0.86
PTP4A2-212ENST00000529477 NXF1Q9UBU9 619 aaKnown RBP20.43■□□□□ 0.86
PTP4A2-212ENST00000529477 GABRDO14764 452 aa20.42■□□□□ 0.86
PTP4A2-212ENST00000529477 AKAP3O75969 853 aa20.42■□□□□ 0.86
PTP4A2-212ENST00000529477 MICAL2O94851 1124 aa20.42■□□□□ 0.86
PTP4A2-212ENST00000529477 FGF19O95750 216 aa20.42■□□□□ 0.86
PTP4A2-212ENST00000529477 FAM163BP0C2L3 166 aa20.42■□□□□ 0.86
PTP4A2-212ENST00000529477 EPB41P11171 864 aaKnown RBP20.42■□□□□ 0.86
PTP4A2-212ENST00000529477 P4HA1P13674 534 aa20.42■□□□□ 0.86
PTP4A2-212ENST00000529477 ACAT1P24752 427 aaKnown RBP20.42■□□□□ 0.86
PTP4A2-212ENST00000529477 NCOA4Q13772 614 aa20.42■□□□□ 0.86
PTP4A2-212ENST00000529477 MAPRE1Q15691 268 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms