RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 RTL10Q7L3V2 364 aa10.75□□□□□ -0.69
CAPN1-210ENST00000527699 HAUS6Q7Z4H7 955 aa10.75□□□□□ -0.69
CAPN1-210ENST00000527699 LONP2Q86WA8 852 aa10.75□□□□□ -0.69
CAPN1-210ENST00000527699 GPBP1Q86WP2 473 aa10.75□□□□□ -0.69
CAPN1-210ENST00000527699 TMC8Q8IU68 726 aa10.75□□□□□ -0.69
CAPN1-210ENST00000527699 ARID3BQ8IVW6 561 aaPredicted RBP10.75□□□□□ -0.69
CAPN1-210ENST00000527699 MFSD6LQ8IWD5 586 aa10.75□□□□□ -0.69
CAPN1-210ENST00000527699 MYCT1Q8N699 235 aa10.75□□□□□ -0.69
CAPN1-210ENST00000527699 SYT2Q8N9I0 419 aaPredicted RBP10.75□□□□□ -0.69
CAPN1-210ENST00000527699 LRRC15Q8TF66 581 aa10.75□□□□□ -0.69
CAPN1-210ENST00000527699 TCEAL3Q969E4 200 aa10.75□□□□□ -0.69
CAPN1-210ENST00000527699 ZSCAN31Q96LW9 406 aaPredicted RBP10.75□□□□□ -0.69
CAPN1-210ENST00000527699 LRRC3Q9BY71 257 aa10.75□□□□□ -0.69
CAPN1-210ENST00000527699 BACH2Q9BYV9 841 aa10.75□□□□□ -0.69
CAPN1-210ENST00000527699 TTC26A0AVF1 554 aa10.74□□□□□ -0.69
CAPN1-210ENST00000527699 MTMR11A4FU01 709 aa10.74□□□□□ -0.69
CAPN1-210ENST00000527699 ANKRD63C9JTQ0 380 aa10.74□□□□□ -0.69
CAPN1-210ENST00000527699 M0QZQ0 153 aa10.74□□□□□ -0.69
CAPN1-210ENST00000527699 C1QL1O75973 258 aa10.74□□□□□ -0.69
CAPN1-210ENST00000527699 KRT18P05783 430 aaKnown RBP10.74□□□□□ -0.69
CAPN1-210ENST00000527699 NFICP08651 508 aa10.74□□□□□ -0.69
CAPN1-210ENST00000527699 CLTAP09496 248 aa10.74□□□□□ -0.69
CAPN1-210ENST00000527699 NMT1P30419 496 aaKnown RBP10.74□□□□□ -0.69
CAPN1-210ENST00000527699 MPLP40238 635 aa10.74□□□□□ -0.69
CAPN1-210ENST00000527699 GPR15P49685 360 aa10.74□□□□□ -0.69
CAPN1-210ENST00000527699 ACOT2P49753 483 aa10.74□□□□□ -0.69
CAPN1-210ENST00000527699 SCAPQ12770 1279 aa10.74□□□□□ -0.69
CAPN1-210ENST00000527699 PLD1Q13393 1074 aa10.74□□□□□ -0.69
CAPN1-210ENST00000527699 MCM6Q14566 821 aa10.74□□□□□ -0.69
CAPN1-210ENST00000527699 MGAT5BQ3V5L5 792 aa10.74□□□□□ -0.69
CAPN1-210ENST00000527699 GAREM2Q75VX8 874 aa10.74□□□□□ -0.69
CAPN1-210ENST00000527699 DNAJB7Q7Z6W7 309 aaPredicted RBP10.74□□□□□ -0.69
CAPN1-210ENST00000527699 DEFB124Q8NES8 71 aa10.74□□□□□ -0.69
CAPN1-210ENST00000527699 DEPDC1BQ8WUY9 529 aa10.74□□□□□ -0.69
CAPN1-210ENST00000527699 FAM84AQ96KN4 292 aa10.74□□□□□ -0.69
CAPN1-210ENST00000527699 SENP8Q96LD8 212 aa10.74□□□□□ -0.69
CAPN1-210ENST00000527699 UBL7Q96S82 380 aaPredicted RBP10.74□□□□□ -0.69
CAPN1-210ENST00000527699 KIF2CQ99661 725 aa10.74□□□□□ -0.69
CAPN1-210ENST00000527699 RPF1Q9H9Y2 349 aaKnown RBP10.74□□□□□ -0.69
CAPN1-210ENST00000527699 UBQLN1Q9UMX0 589 aaKnown RBP10.74□□□□□ -0.69
CAPN1-210ENST00000527699 STK24Q9Y6E0 443 aa10.74□□□□□ -0.69
CAPN1-210ENST00000527699 FREM2Q5SZK8 3169 aa10.74□□□□□ -0.69
CAPN1-210ENST00000527699 COL4A2P08572 1712 aa10.73□□□□□ -0.69
CAPN1-210ENST00000527699 SPECC1L-ADORA2AF8WAN1 911 aa10.73□□□□□ -0.69
CAPN1-210ENST00000527699 ARNTLO00327 626 aa10.73□□□□□ -0.69
CAPN1-210ENST00000527699 MICAL2O94851 1124 aa10.73□□□□□ -0.69
CAPN1-210ENST00000527699 FAM13AO94988 1023 aa10.73□□□□□ -0.69
CAPN1-210ENST00000527699 OAZ2O95190 189 aa10.73□□□□□ -0.69
CAPN1-210ENST00000527699 EPN2O95208 641 aa10.73□□□□□ -0.69
CAPN1-210ENST00000527699 PRAMEF12O95522 483 aa10.73□□□□□ -0.69
CAPN1-210ENST00000527699 LRPAP1P30533 357 aa10.73□□□□□ -0.69
CAPN1-210ENST00000527699 PRPHP41219 470 aa10.73□□□□□ -0.69
CAPN1-210ENST00000527699 NCKAP1LP55160 1127 aa10.73□□□□□ -0.69
CAPN1-210ENST00000527699 GRIN1Q05586 938 aa10.73□□□□□ -0.69
CAPN1-210ENST00000527699 ZBTB6Q15916 424 aa10.73□□□□□ -0.69
CAPN1-210ENST00000527699 UAP1L1Q3KQV9 507 aa10.73□□□□□ -0.69
CAPN1-210ENST00000527699 ZC2HC1CQ53FD0 456 aaPredicted RBP10.73□□□□□ -0.69
CAPN1-210ENST00000527699 SDHAF4Q5VUM1 108 aa10.73□□□□□ -0.69
CAPN1-210ENST00000527699 TRIM68Q6AZZ1 485 aa10.73□□□□□ -0.69
CAPN1-210ENST00000527699 CENPPQ6IPU0 288 aa10.73□□□□□ -0.69
CAPN1-210ENST00000527699 ARMCX5Q6P1M9 558 aa10.73□□□□□ -0.69
CAPN1-210ENST00000527699 PKN3Q6P5Z2 889 aa10.73□□□□□ -0.69
CAPN1-210ENST00000527699 OR10T2Q8NGX3 314 aa10.73□□□□□ -0.69
CAPN1-210ENST00000527699 RASSF8Q8NHQ8 419 aa10.73□□□□□ -0.69
CAPN1-210ENST00000527699 NOC3LQ8WTT2 800 aaKnown RBP10.73□□□□□ -0.69
CAPN1-210ENST00000527699 SPIRE2Q8WWL2 714 aa10.73□□□□□ -0.69
CAPN1-210ENST00000527699 REEP2Q9BRK0 252 aa10.73□□□□□ -0.69
CAPN1-210ENST00000527699 PYM1Q9BRP8 204 aaKnown RBP10.73□□□□□ -0.69
CAPN1-210ENST00000527699 MSTO1Q9BUK6 570 aa10.73□□□□□ -0.69
CAPN1-210ENST00000527699 CLMPQ9H6B4 373 aa10.73□□□□□ -0.69
CAPN1-210ENST00000527699 DAXXQ9UER7 740 aaPredicted RBP10.73□□□□□ -0.69
CAPN1-210ENST00000527699 TBX20Q9UMR3 447 aa10.73□□□□□ -0.69
CAPN1-210ENST00000527699 F5P12259 2224 aa10.72□□□□□ -0.69
CAPN1-210ENST00000527699 OR6C75A6NL08 312 aa10.72□□□□□ -0.69
CAPN1-210ENST00000527699 H3BQV1 296 aa10.72□□□□□ -0.69
CAPN1-210ENST00000527699 HNRNPDLO14979 420 aaKnown RBP10.72□□□□□ -0.69
CAPN1-210ENST00000527699 OGTO15294 1046 aa10.72□□□□□ -0.69
CAPN1-210ENST00000527699 CHADO15335 359 aa10.72□□□□□ -0.69
CAPN1-210ENST00000527699 EXTL3O43909 919 aa10.72□□□□□ -0.69
CAPN1-210ENST00000527699 GJB2P29033 226 aa10.72□□□□□ -0.69
CAPN1-210ENST00000527699 RDXP35241 583 aaKnown RBP10.72□□□□□ -0.69
CAPN1-210ENST00000527699 EPHA5P54756 1037 aa10.72□□□□□ -0.69
CAPN1-210ENST00000527699 LILRA4P59901 499 aa10.72□□□□□ -0.69
CAPN1-210ENST00000527699 ATP2C1P98194 919 aaPredicted RBP10.72□□□□□ -0.69
CAPN1-210ENST00000527699 GPR17Q13304 367 aa10.72□□□□□ -0.69
CAPN1-210ENST00000527699 KARSQ15046 597 aaKnown RBP10.72□□□□□ -0.69
CAPN1-210ENST00000527699 TAF12Q16514 161 aa10.72□□□□□ -0.69
CAPN1-210ENST00000527699 TMEM119Q4V9L6 283 aa10.72□□□□□ -0.69
CAPN1-210ENST00000527699 ARHGAP15Q53QZ3 475 aa10.72□□□□□ -0.69
CAPN1-210ENST00000527699 C9orf57Q5W0N0 161 aa10.72□□□□□ -0.69
CAPN1-210ENST00000527699 NAIF1Q69YI7 327 aaPredicted RBP10.72□□□□□ -0.69
CAPN1-210ENST00000527699 SCARA3Q6AZY7 606 aa10.72□□□□□ -0.69
CAPN1-210ENST00000527699 SLC39A4Q6P5W5 647 aa10.72□□□□□ -0.69
CAPN1-210ENST00000527699 ZPBP2Q6X784 338 aa10.72□□□□□ -0.69
CAPN1-210ENST00000527699 TMEFF1Q8IYR6 380 aa10.72□□□□□ -0.69
CAPN1-210ENST00000527699 BEST2Q8NFU1 509 aa10.72□□□□□ -0.69
CAPN1-210ENST00000527699 LOXL4Q96JB6 756 aa10.72□□□□□ -0.69
CAPN1-210ENST00000527699 NTPCRQ9BSD7 190 aaKnown RBP10.72□□□□□ -0.69
CAPN1-210ENST00000527699 IER2Q9BTL4 223 aa10.72□□□□□ -0.69
CAPN1-210ENST00000527699 TIPINQ9BVW5 301 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms