RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 HSFX1Q9UBD0 423 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 ITGA11Q9UKX5 1188 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 SIT1Q9Y3P8 196 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 TCHHQ07283 1943 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 A0A1B0GVL5 298 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 KANSL1LA0AUZ9 987 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 PROB1E7EW31 1015 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 KIAA0391O15091 583 aaKnown RBP11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 KRT19P08727 400 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 SLFN14P0C7P3 912 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 PFKFB1P16118 471 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 CMA1P23946 247 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 ACAT1P24752 427 aaKnown RBP11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 NBL1P41271 181 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 GPR15P49685 360 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 STK4Q13043 487 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 FZD5Q13467 585 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 ANGPT1Q15389 498 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 BMT2Q1RMZ1 405 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 SOWAHAQ2M3V2 549 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 MGAT5BQ3V5L5 792 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 STXBP4Q6ZWJ1 553 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 FRMD5Q7Z6J6 570 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 TMEM150AQ86TG1 271 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 RDH13Q8NBN7 331 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 STKLD1Q8NE28 680 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 PJA1Q8NG27 643 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 PLEKHO2Q8TD55 490 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 GIPC2Q8TF65 315 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 ZNF516Q92618 1163 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 IRF2BPLQ9H1B7 796 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 HEBP1Q9NRV9 189 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 GDAP2Q9NXN4 497 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 ABI2Q9NYB9 513 aaPredicted RBP11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 HPSEQ9Y251 543 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 ASB3Q9Y575 518 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 SNX9Q9Y5X1 595 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 FAM186AA6NE01 2351 aa11.23□□□□□ -0.61
PRPF40B-204ENST00000527253 HEPACAM2A8MVW5 462 aa11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 ARNTLO00327 626 aa11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 GABRDO14764 452 aa11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 UBE4BO95155 1302 aa11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 CST3P01034 146 aaPredicted RBP11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 TMEM191BP0C7N4 346 aa11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 HMGA1P17096 107 aaKnown RBP11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 RFX1P22670 979 aa11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 GABRR2P28476 465 aa11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 TUFMP49411 452 aaKnown RBP11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 CYP2J2P51589 502 aa11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 PFKPQ01813 784 aa11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 PRKCQQ04759 706 aa11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 SNRNP35Q16560 246 aaKnown RBP11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 SDHAF4Q5VUM1 108 aa11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 TPRG1Q6ZUI0 275 aa11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 ARID3BQ8IVW6 561 aaPredicted RBP11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 DCP1BQ8IZD4 617 aaKnown RBP11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 MAML2Q8IZL2 1156 aaPredicted RBP11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 ZNF687Q8N1G0 1237 aa11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 TOP6BLQ8N6T0 577 aa11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 KIAA0895Q8NCT3 520 aa11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 SPPL2BQ8TCT7 592 aa11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 C2orf15Q8WU43 125 aaKnown RBP11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 KBTBD7Q8WVZ9 684 aa11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 HPDLQ96IR7 371 aa11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 SHDQ96IW2 340 aa11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 ACBD6Q9BR61 282 aa11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 PI4K2AQ9BTU6 479 aa11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 TRMT61BQ9BVS5 477 aaKnown RBP11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 ATXN3LQ9H3M9 355 aa11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 LTB4R2Q9NPC1 389 aa11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 DDX43Q9NXZ2 648 aaKnown RBP11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 NME7Q9Y5B8 376 aa11.22□□□□□ -0.61
PRPF40B-204ENST00000527253 COL4A2P08572 1712 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 FAM237AA0A1B0GTK4 181 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 MYBPHLA2RUH7 354 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 FAM170BA6NMN3 283 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 HUS1O60921 280 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 ATP2C2O75185 946 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 PSMC3P17980 439 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 CYP2F1P24903 491 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 LMO2P25791 158 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 TARSP26639 723 aaKnown RBP11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 GDI1P31150 447 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 CYP4F8P98187 520 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 CYP24A1Q07973 514 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 SMARCB1Q12824 385 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 UBXN2BQ14CS0 331 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 PSMD6Q15008 389 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 SURF1Q15526 300 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 KNOP1Q1ED39 458 aaKnown RBP11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 DUOXA2Q1HG44 320 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 KMT5BQ4FZB7 885 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 INTS6LQ5JSJ4 861 aaKnown RBP11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 GPR158Q5T848 1215 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 ASCL5Q7RTU5 278 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 TRAPPC11Q7Z392 1133 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 ITIH5Q86UX2 942 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 WDR49Q8IV35 697 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 MFSD6LQ8IWD5 586 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 C12orf56Q8IXR9 622 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms