RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 TMEM270Q6UE05 265 aa25.78■■□□□ 1.72
PVT1-212ENST00000521951 TCF25Q9BQ70 676 aa25.78■■□□□ 1.72
PVT1-212ENST00000521951 F8VZ95 297 aa25.77■■□□□ 1.72
PVT1-212ENST00000521951 KRT5P13647 590 aa25.77■■□□□ 1.72
PVT1-212ENST00000521951 USP8P40818 1118 aa25.77■■□□□ 1.72
PVT1-212ENST00000521951 TBX2Q13207 712 aaPredicted RBP25.77■■□□□ 1.72
PVT1-212ENST00000521951 ORC1Q13415 861 aa25.77■■□□□ 1.72
PVT1-212ENST00000521951 TRIM14Q14142 442 aa25.77■■□□□ 1.72
PVT1-212ENST00000521951 PTPN14Q15678 1187 aa25.77■■□□□ 1.72
PVT1-212ENST00000521951 RSPO2Q6UXX9 243 aaPredicted RBP25.77■■□□□ 1.72
PVT1-212ENST00000521951 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.77■■□□□ 1.72
PVT1-212ENST00000521951 PPFIBP1Q86W92 1011 aa25.77■■□□□ 1.72
PVT1-212ENST00000521951 OR10T2Q8NGX3 314 aa25.77■■□□□ 1.72
PVT1-212ENST00000521951 ACBD6Q9BR61 282 aa25.77■■□□□ 1.72
PVT1-212ENST00000521951 NT5C1AQ9BXI3 368 aa25.77■■□□□ 1.72
PVT1-212ENST00000521951 ENTPD7Q9NQZ7 604 aa25.77■■□□□ 1.72
PVT1-212ENST00000521951 MTRRQ9UBK8 725 aa25.77■■□□□ 1.72
PVT1-212ENST00000521951 SSX2IPQ9Y2D8 614 aa25.77■■□□□ 1.72
PVT1-212ENST00000521951 BACE2Q9Y5Z0 518 aa25.77■■□□□ 1.72
PVT1-212ENST00000521951 TMEM265A0A087WTH1 108 aa25.76■■□□□ 1.71
PVT1-212ENST00000521951 FSCN2O14926 492 aa25.76■■□□□ 1.71
PVT1-212ENST00000521951 CSPG5O95196 566 aa25.76■■□□□ 1.71
PVT1-212ENST00000521951 PCSK1P29120 753 aa25.76■■□□□ 1.71
PVT1-212ENST00000521951 CASP14P31944 242 aa25.76■■□□□ 1.71
PVT1-212ENST00000521951 FXR1P51114 621 aaKnown RBP eCLIP25.76■■□□□ 1.71
PVT1-212ENST00000521951 RAD23BP54727 409 aa25.76■■□□□ 1.71
PVT1-212ENST00000521951 SMYD5Q6GMV2 418 aa25.76■■□□□ 1.71
PVT1-212ENST00000521951 DRC7Q8IY82 874 aa25.76■■□□□ 1.71
PVT1-212ENST00000521951 FAM71AQ8IYT1 594 aa25.76■■□□□ 1.71
PVT1-212ENST00000521951 RBBP8NLQ8NC74 664 aaPredicted RBP25.76■■□□□ 1.71
PVT1-212ENST00000521951 TMEM209Q96SK2 561 aa25.76■■□□□ 1.71
PVT1-212ENST00000521951 LMAN2LQ9H0V9 348 aa25.76■■□□□ 1.71
PVT1-212ENST00000521951 TTYH1Q9H313 450 aaPredicted RBP25.76■■□□□ 1.71
PVT1-212ENST00000521951 DPEP3Q9H4B8 488 aa25.76■■□□□ 1.71
PVT1-212ENST00000521951 CDH9Q9ULB4 789 aa25.76■■□□□ 1.71
PVT1-212ENST00000521951 MYO7AQ13402 2215 aa25.76■■□□□ 1.71
PVT1-212ENST00000521951 OR6C75A6NL08 312 aa25.75■■□□□ 1.71
PVT1-212ENST00000521951 RPL17P18621 184 aaKnown RBP25.75■■□□□ 1.71
PVT1-212ENST00000521951 IRS1P35568 1242 aa25.75■■□□□ 1.71
PVT1-212ENST00000521951 ZNF132P52740 706 aa25.75■■□□□ 1.71
PVT1-212ENST00000521951 BMS1Q14692 1282 aaKnown RBP25.75■■□□□ 1.71
PVT1-212ENST00000521951 PLPP4Q5VZY2 271 aa25.75■■□□□ 1.71
PVT1-212ENST00000521951 ACOT1Q86TX2 421 aa25.75■■□□□ 1.71
PVT1-212ENST00000521951 CRYBG2Q8N1P7 616 aa25.75■■□□□ 1.71
PVT1-212ENST00000521951 SLC4A11Q8NBS3 891 aa25.75■■□□□ 1.71
PVT1-212ENST00000521951 MICAL1Q8TDZ2 1067 aa25.75■■□□□ 1.71
PVT1-212ENST00000521951 TMEM176AQ96HP8 235 aa25.75■■□□□ 1.71
PVT1-212ENST00000521951 LRCH3Q96II8 777 aa25.75■■□□□ 1.71
PVT1-212ENST00000521951 SYT15Q9BQS2 421 aa25.75■■□□□ 1.71
PVT1-212ENST00000521951 OXCT2Q9BYC2 517 aaPredicted RBP25.75■■□□□ 1.71
PVT1-212ENST00000521951 RXFP1Q9HBX9 757 aa25.75■■□□□ 1.71
PVT1-212ENST00000521951 NGRNQ9NPE2 291 aaKnown RBP25.75■■□□□ 1.71
PVT1-212ENST00000521951 MYO6Q9UM54 1294 aa25.75■■□□□ 1.71
PVT1-212ENST00000521951 LUC7L2Q9Y383 392 aaKnown RBP25.75■■□□□ 1.71
PVT1-212ENST00000521951 IRAK3Q9Y616 596 aa25.75■■□□□ 1.71
PVT1-212ENST00000521951 COL4A4P53420 1690 aaPredicted RBP25.74■■□□□ 1.71
PVT1-212ENST00000521951 LPXNO60711 386 aa25.74■■□□□ 1.71
PVT1-212ENST00000521951 ATP2C2O75185 946 aa25.74■■□□□ 1.71
PVT1-212ENST00000521951 CA8P35219 290 aa25.74■■□□□ 1.71
PVT1-212ENST00000521951 SOX5P35711 763 aa25.74■■□□□ 1.71
PVT1-212ENST00000521951 STAT1P42224 750 aa25.74■■□□□ 1.71
PVT1-212ENST00000521951 ZBED6P86452 979 aa25.74■■□□□ 1.71
PVT1-212ENST00000521951 SMC1AQ14683 1233 aaKnown RBP25.74■■□□□ 1.71
PVT1-212ENST00000521951 TNIP3Q96KP6 325 aa25.74■■□□□ 1.71
PVT1-212ENST00000521951 LPIN3Q9BQK8 851 aa25.74■■□□□ 1.71
PVT1-212ENST00000521951 CLSTN3Q9BQT9 956 aa25.74■■□□□ 1.71
PVT1-212ENST00000521951 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.74■■□□□ 1.71
PVT1-212ENST00000521951 PCDHGC5Q9Y5F6 944 aa25.74■■□□□ 1.71
PVT1-212ENST00000521951 LRRC53A6NM62 1247 aa25.73■■□□□ 1.71
PVT1-212ENST00000521951 CYP26A1O43174 497 aa25.73■■□□□ 1.71
PVT1-212ENST00000521951 ADAM12O43184 909 aa25.73■■□□□ 1.71
PVT1-212ENST00000521951 PTPN1P18031 435 aaKnown RBP25.73■■□□□ 1.71
PVT1-212ENST00000521951 CLCN1P35523 988 aa25.73■■□□□ 1.71
PVT1-212ENST00000521951 PSMC1P62191 440 aaKnown RBP25.73■■□□□ 1.71
PVT1-212ENST00000521951 INTS6LQ5JSJ4 861 aaKnown RBP25.73■■□□□ 1.71
PVT1-212ENST00000521951 PDE12Q6L8Q7 609 aaKnown RBP25.73■■□□□ 1.71
PVT1-212ENST00000521951 MRPL43Q8N983 215 aaKnown RBP25.73■■□□□ 1.71
PVT1-212ENST00000521951 ZNF397Q8NF99 534 aaPredicted RBP25.73■■□□□ 1.71
PVT1-212ENST00000521951 ZCWPW1Q9H0M4 648 aa25.73■■□□□ 1.71
PVT1-212ENST00000521951 CRTAC1Q9NQ79 661 aa25.73■■□□□ 1.71
PVT1-212ENST00000521951 FNIP2Q9P278 1114 aa25.73■■□□□ 1.71
PVT1-212ENST00000521951 CDY1Q9Y6F8 540 aa25.73■■□□□ 1.71
PVT1-212ENST00000521951 ATG2AQ2TAZ0 1938 aa25.73■■□□□ 1.71
PVT1-212ENST00000521951 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.73■■□□□ 1.71
PVT1-212ENST00000521951 C2orf71A6NGG8 1288 aa25.73■■□□□ 1.71
PVT1-212ENST00000521951 HIDE1A8MVS5 230 aa25.73■■□□□ 1.71
PVT1-212ENST00000521951 GFPT2O94808 682 aa25.73■■□□□ 1.71
PVT1-212ENST00000521951 TPM1P09493 284 aa25.73■■□□□ 1.71
PVT1-212ENST00000521951 OR4Q2P0C623 313 aa25.73■■□□□ 1.71
PVT1-212ENST00000521951 OR1D2P34982 312 aa25.73■■□□□ 1.71
PVT1-212ENST00000521951 TSPY1Q01534 308 aa25.73■■□□□ 1.71
PVT1-212ENST00000521951 SLC8B1Q6J4K2 584 aa25.73■■□□□ 1.71
PVT1-212ENST00000521951 LRRTM3Q86VH5 581 aa25.73■■□□□ 1.71
PVT1-212ENST00000521951 SPC24Q8NBT2 197 aa25.73■■□□□ 1.71
PVT1-212ENST00000521951 B3GALNT2Q8NCR0 500 aa25.73■■□□□ 1.71
PVT1-212ENST00000521951 HEXIM2Q96MH2 286 aaKnown RBP25.73■■□□□ 1.71
PVT1-212ENST00000521951 MYBPHLA2RUH7 354 aa25.72■■□□□ 1.71
PVT1-212ENST00000521951 CALCAP01258 141 aa25.72■■□□□ 1.71
PVT1-212ENST00000521951 PAEPP09466 180 aa25.72■■□□□ 1.71
PVT1-212ENST00000521951 CNPP09543 421 aaKnown RBP25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms