RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 RNF44Q7L0R7 432 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 ZNF354CQ86Y25 554 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 TXLNBQ8N3L3 684 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 SDR16C5Q8N3Y7 309 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 PDPRQ8NCN5 879 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 STYXQ8WUJ0 223 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 TRAPPC12Q8WVT3 735 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 DDX17Q92841 729 aaKnown RBP4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 GCC1Q96CN9 775 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 SORBS1Q9BX66 1292 aaKnown RBP4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 TLR10Q9BXR5 811 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 DHX36Q9H2U1 1008 aaKnown RBP4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 SLAMF7Q9NQ25 335 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 PDP2Q9P2J9 529 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 HESX1Q9UBX0 185 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 MID2Q9UJV3 735 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 OAZ3Q9UMX2 235 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 ATP11BQ9Y2G3 1177 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 SH3BP1Q9Y3L3 701 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 CDHR4A6H8M9 788 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 OR2W5A6NFC9 320 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 TISP43B9A030 160 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 B9A039 149 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 EYA2O00167 538 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 THAP12O43422 761 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 SKAP2O75563 359 aaPredicted RBP4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 WDHD1O75717 1129 aaPredicted RBP4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 FAM155BO75949 473 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 GNAI3P08754 354 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 FCER1AP12319 257 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 MYL4P12829 197 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 CR2P20023 1033 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 GCSHP23434 173 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 VIPR2P41587 438 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 KCNJ5P48544 419 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 CCT5P48643 541 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 PPM1FP49593 454 aaPredicted RBP4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 COPAP53621 1224 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 WNT3P56703 355 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 GNAI1P63096 354 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 CREMQ03060 361 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 RAB32Q13637 225 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 ALFQ53S48 1182 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 TMTC4Q5T4D3 741 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 ATXN7L2Q5T6C5 722 aaPredicted RBP4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 FAM102AQ5T9C2 384 aaPredicted RBP4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 FAM160B1Q5W0V3 765 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 SPTY2D1Q68D10 685 aaPredicted RBP4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 PLAG1Q6DJT9 500 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 CLEC4GQ6UXB4 293 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 GGNQ86UU5 652 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 SIMC1Q8NDZ2 872 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 MDGA1Q8NFP4 955 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 POC1BQ8TC44 478 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 FAM71BQ8TC56 605 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 OTUD7AQ8TE49 926 aaPredicted RBP4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 IPO4Q8TEX9 1081 aaKnown RBP4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 ZNF483Q8TF39 744 aaPredicted RBP4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 CCT6BQ92526 530 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 SCLT1Q96NL6 688 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 SSBP3Q9BWW4 388 aaPredicted RBP4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 PLA2G12BQ9BX93 195 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 EIF2AQ9BY44 585 aaKnown RBP4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 NELFAQ9H3P2 528 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 CTTNBP2NLQ9P2B4 639 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 NCDNQ9UBB6 729 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 DNMT3BQ9UBC3 853 aaKnown RBP4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 ANAPC4Q9UJX5 808 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 DTNAQ9Y4J8 743 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 PAXBP1Q9Y5B6 917 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 DUSP10Q9Y6W6 482 aa4.12□□□□□ -1.75
HMGN1P28-201ENST00000521340 A0A1W2PRX2 142 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 PRRT4C9JH25 899 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 CHEK2O96017 543 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 CKMT1AP12532 417 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 EGR1P18146 543 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 RABGGTBP53611 331 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 ARL4CP56559 192 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 RAC3P60763 192 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 RAP2BP61225 183 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 PPP2CBP62714 309 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 PPP2CAP67775 309 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 FOXL1Q12952 345 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 ATP2B3Q16720 1220 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 ARHGAP15Q53QZ3 475 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 FKBP15Q5T1M5 1219 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 ZFYVE27Q5T4F4 411 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 NAIF1Q69YI7 327 aaPredicted RBP4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 PRRT2Q7Z6L0 340 aaPredicted RBP4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 FAM83AQ86UY5 434 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 ZNF280BQ86YH2 543 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 HERC6Q8IVU3 1022 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 SP8Q8IXZ3 490 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 CFAP52Q8N1V2 620 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 CLASRPQ8N2M8 674 aaKnown RBP4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 ATG16L2Q8NAA4 619 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 PCSK9Q8NBP7 692 aaKnown RBP4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 RNF169Q8NCN4 708 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 SLC17A8Q8NDX2 589 aa4.11□□□□□ -1.75
HMGN1P28-201ENST00000521340 NUP133Q8WUM0 1156 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms