RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 TMEM206Q9H813 350 aa13.43□□□□□ -0.26
TRAPPC9-206ENST00000519482 FBXO4Q9UKT5 387 aa13.43□□□□□ -0.26
TRAPPC9-206ENST00000519482 SLC27A5Q9Y2P5 690 aa13.43□□□□□ -0.26
TRAPPC9-206ENST00000519482 MTF2Q9Y483 593 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC9-206ENST00000519482 F5P12259 2224 aa13.43□□□□□ -0.26
TRAPPC9-206ENST00000519482 A0A087X0B3 334 aa13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 A0A1W2PRU2 124 aa13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 KPNA7A9QM74 516 aa13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 LAMTOR5O43504 91 aa13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 CUTAO60888 179 aa13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 LMNAP02545 664 aaKnown RBP13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 GJA1P17302 382 aa13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 CD72P21854 359 aa13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 TARSP26639 723 aaKnown RBP13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 GDI1P31150 447 aa13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 GRM2Q14416 872 aa13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 SLC39A12Q504Y0 691 aa13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 DNAJB7Q7Z6W7 309 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 BRSK2Q8IWQ3 736 aa13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 CCDC65Q8IXS2 484 aa13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 SYCP3Q8IZU3 236 aa13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 ADSSL1Q8N142 457 aa13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 FSIP1Q8NA03 581 aa13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 OR10T2Q8NGX3 314 aa13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 TRIM44Q96DX7 344 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 ZNF560Q96MR9 790 aa13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 TMEM209Q96SK2 561 aa13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 PYM1Q9BRP8 204 aaKnown RBP13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 FAM213AQ9BRX8 229 aa13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 PANK2Q9BZ23 570 aa13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 SLITRK6Q9H5Y7 841 aa13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 ZNF334Q9HCZ1 680 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 PANK4Q9NVE7 773 aa13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 SPATA6Q9NWH7 488 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 TBC1D7Q9P0N9 293 aa13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 R4GN57 208 aa13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 OBSL1O75147 1896 aa13.42□□□□□ -0.26
TRAPPC9-206ENST00000519482 ZNF638Q14966 1978 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-206ENST00000519482 FAM237AA0A1B0GTK4 181 aa13.41□□□□□ -0.26
TRAPPC9-206ENST00000519482 ZNF263O14978 683 aa13.41□□□□□ -0.26
TRAPPC9-206ENST00000519482 KIAA0391O15091 583 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-206ENST00000519482 VIPR2P41587 438 aa13.41□□□□□ -0.26
TRAPPC9-206ENST00000519482 CASP5P51878 434 aa13.41□□□□□ -0.26
TRAPPC9-206ENST00000519482 MLLT6P55198 1093 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC9-206ENST00000519482 VEPH1Q14D04 833 aa13.41□□□□□ -0.26
TRAPPC9-206ENST00000519482 STXBP4Q6ZWJ1 553 aa13.41□□□□□ -0.26
TRAPPC9-206ENST00000519482 DCP1BQ8IZD4 617 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-206ENST00000519482 MAML2Q8IZL2 1156 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC9-206ENST00000519482 PDILTQ8N807 584 aa13.41□□□□□ -0.26
TRAPPC9-206ENST00000519482 SPPL2BQ8TCT7 592 aa13.41□□□□□ -0.26
TRAPPC9-206ENST00000519482 CACTINQ8WUQ7 758 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-206ENST00000519482 CUEDC2Q9H467 287 aa13.41□□□□□ -0.26
TRAPPC9-206ENST00000519482 RBAKQ9NYW8 714 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC9-206ENST00000519482 EP300Q09472 2414 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC9-206ENST00000519482 SHISA7A6NL88 538 aa13.4□□□□□ -0.26
TRAPPC9-206ENST00000519482 HEPACAM2A8MVW5 462 aa13.4□□□□□ -0.26
TRAPPC9-206ENST00000519482 CHADO15335 359 aa13.4□□□□□ -0.26
TRAPPC9-206ENST00000519482 EXTL3O43909 919 aa13.4□□□□□ -0.26
TRAPPC9-206ENST00000519482 GABRR2P28476 465 aa13.4□□□□□ -0.26
TRAPPC9-206ENST00000519482 WEE1P30291 646 aa13.4□□□□□ -0.26
TRAPPC9-206ENST00000519482 TFAMQ00059 246 aaKnown RBP13.4□□□□□ -0.26
TRAPPC9-206ENST00000519482 FCHO2Q0JRZ9 810 aa13.4□□□□□ -0.26
TRAPPC9-206ENST00000519482 FZD5Q13467 585 aa13.4□□□□□ -0.26
TRAPPC9-206ENST00000519482 ARHGAP15Q53QZ3 475 aa13.4□□□□□ -0.26
TRAPPC9-206ENST00000519482 WSCD1Q658N2 575 aa13.4□□□□□ -0.26
TRAPPC9-206ENST00000519482 GAREM2Q75VX8 874 aa13.4□□□□□ -0.26
TRAPPC9-206ENST00000519482 YAF2Q8IY57 180 aa13.4□□□□□ -0.26
TRAPPC9-206ENST00000519482 FMR1NBQ8N0W7 255 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-206ENST00000519482 TTC9BQ8N6N2 239 aa13.4□□□□□ -0.26
TRAPPC9-206ENST00000519482 LRRC52Q8N7C0 313 aa13.4□□□□□ -0.26
TRAPPC9-206ENST00000519482 SAAL1Q96ER3 474 aa13.4□□□□□ -0.26
TRAPPC9-206ENST00000519482 MSANTD3Q96H12 275 aa13.4□□□□□ -0.26
TRAPPC9-206ENST00000519482 PDLIM2Q96JY6 352 aa13.4□□□□□ -0.26
TRAPPC9-206ENST00000519482 SEPT5Q99719 369 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-206ENST00000519482 IER2Q9BTL4 223 aa13.4□□□□□ -0.26
TRAPPC9-206ENST00000519482 ATXN3LQ9H3M9 355 aa13.4□□□□□ -0.26
TRAPPC9-206ENST00000519482 OBP2AQ9NY56 170 aa13.4□□□□□ -0.26
TRAPPC9-206ENST00000519482 ZMYM5Q9UJ78 669 aa13.4□□□□□ -0.26
TRAPPC9-206ENST00000519482 KIF26AQ9ULI4 1882 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-206ENST00000519482 ARNTLO00327 626 aa13.39□□□□□ -0.27
TRAPPC9-206ENST00000519482 SOAT2O75908 522 aa13.39□□□□□ -0.27
TRAPPC9-206ENST00000519482 PRPF6O94906 941 aaKnown RBP13.39□□□□□ -0.27
TRAPPC9-206ENST00000519482 ITGB3P05106 788 aa13.39□□□□□ -0.27
TRAPPC9-206ENST00000519482 HAPLN1P10915 354 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC9-206ENST00000519482 ATF6P18850 670 aa13.39□□□□□ -0.27
TRAPPC9-206ENST00000519482 CDC25CP30307 473 aa13.39□□□□□ -0.27
TRAPPC9-206ENST00000519482 POLR2BP30876 1174 aaKnown RBP13.39□□□□□ -0.27
TRAPPC9-206ENST00000519482 WNT7BP56706 349 aa13.39□□□□□ -0.27
TRAPPC9-206ENST00000519482 AMPD3Q01432 767 aa13.39□□□□□ -0.27
TRAPPC9-206ENST00000519482 TYRO3Q06418 890 aa13.39□□□□□ -0.27
TRAPPC9-206ENST00000519482 E2F4Q16254 413 aa13.39□□□□□ -0.27
TRAPPC9-206ENST00000519482 MGAT5BQ3V5L5 792 aa13.39□□□□□ -0.27
TRAPPC9-206ENST00000519482 C1orf228Q6PIY5 440 aa13.39□□□□□ -0.27
TRAPPC9-206ENST00000519482 MAMSTRQ6ZN01 415 aa13.39□□□□□ -0.27
TRAPPC9-206ENST00000519482 ARID3BQ8IVW6 561 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC9-206ENST00000519482 ZNF687Q8N1G0 1237 aa13.39□□□□□ -0.27
TRAPPC9-206ENST00000519482 GPD1LQ8N335 351 aa13.39□□□□□ -0.27
TRAPPC9-206ENST00000519482 C1orf127Q8N9H9 656 aa13.39□□□□□ -0.27
TRAPPC9-206ENST00000519482 ZSWIM2Q8NEG5 633 aa13.39□□□□□ -0.27
TRAPPC9-206ENST00000519482 SPATA18Q8TC71 538 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms