RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	MYO10	Q9HD67	2058 aa		25.95	■■□□□ 1.74
CNOT7-204	ENST00000518885	NR3C1	P04150	777 aa		25.94	■■□□□ 1.74
CNOT7-204	ENST00000518885	AVPR2	P30518	371 aa		25.94	■■□□□ 1.74
CNOT7-204	ENST00000518885	ATIC	P31939	592 aa		25.94	■■□□□ 1.74
CNOT7-204	ENST00000518885	PLA2G5	P39877	138 aa		25.94	■■□□□ 1.74
CNOT7-204	ENST00000518885	TNNC1	P63316	161 aa		25.94	■■□□□ 1.74
CNOT7-204	ENST00000518885	ASTL	Q6HA08	431 aa	Predicted RBP	25.94	■■□□□ 1.74
CNOT7-204	ENST00000518885	FLCN	Q8NFG4	579 aa		25.94	■■□□□ 1.74
CNOT7-204	ENST00000518885	ELSPBP1	Q96BH3	223 aa		25.94	■■□□□ 1.74
CNOT7-204	ENST00000518885	SHD	Q96IW2	340 aa		25.94	■■□□□ 1.74
CNOT7-204	ENST00000518885	MMS19	Q96T76	1030 aa		25.94	■■□□□ 1.74
CNOT7-204	ENST00000518885	SLITRK6	Q9H5Y7	841 aa		25.94	■■□□□ 1.74
CNOT7-204	ENST00000518885	ABCB6	Q9NP58	842 aa		25.94	■■□□□ 1.74
CNOT7-204	ENST00000518885	DOCK8	Q8NF50	2099 aa		25.93	■■□□□ 1.74
CNOT7-204	ENST00000518885	STK25	O00506	426 aa		25.93	■■□□□ 1.74
CNOT7-204	ENST00000518885	SMC2	O95347	1197 aa		25.93	■■□□□ 1.74
CNOT7-204	ENST00000518885	FAM163B	P0C2L3	166 aa		25.93	■■□□□ 1.74
CNOT7-204	ENST00000518885	RPL13	P26373	211 aa	Known RBP	25.93	■■□□□ 1.74
CNOT7-204	ENST00000518885	MAPRE1	Q15691	268 aa	Known RBP	25.93	■■□□□ 1.74
CNOT7-204	ENST00000518885	ARHGAP15	Q53QZ3	475 aa		25.93	■■□□□ 1.74
CNOT7-204	ENST00000518885	INTS6L	Q5JSJ4	861 aa	Known RBP	25.93	■■□□□ 1.74
CNOT7-204	ENST00000518885	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	25.93	■■□□□ 1.74
CNOT7-204	ENST00000518885	HS6ST3	Q8IZP7	471 aa		25.93	■■□□□ 1.74
CNOT7-204	ENST00000518885	GUF1	Q8N442	669 aa	Known RBP	25.93	■■□□□ 1.74
CNOT7-204	ENST00000518885	SYAP1	Q96A49	352 aa	Predicted RBP	25.93	■■□□□ 1.74
CNOT7-204	ENST00000518885	E2F7	Q96AV8	911 aa		25.93	■■□□□ 1.74
CNOT7-204	ENST00000518885	CRISPLD1	Q9H336	500 aa		25.93	■■□□□ 1.74
CNOT7-204	ENST00000518885	ZFP14	Q9HCL3	533 aa		25.93	■■□□□ 1.74
CNOT7-204	ENST00000518885	DMAC2	Q9NW81	257 aa		25.93	■■□□□ 1.74
CNOT7-204	ENST00000518885	CIZ1	Q9ULV3	898 aa	Predicted RBP	25.93	■■□□□ 1.74
CNOT7-204	ENST00000518885	TRAF3IP3	Q9Y228	551 aa		25.93	■■□□□ 1.74
CNOT7-204	ENST00000518885	CLSTN1	O94985	981 aa		25.92	■■□□□ 1.74
CNOT7-204	ENST00000518885	STAU1	O95793	577 aa	Known RBP	25.92	■■□□□ 1.74
CNOT7-204	ENST00000518885	PRR29	P0C7W0	189 aa		25.92	■■□□□ 1.74
CNOT7-204	ENST00000518885	HAPLN1	P10915	354 aa	Predicted RBP	25.92	■■□□□ 1.74
CNOT7-204	ENST00000518885	RPL10A	P62906	217 aa	Known RBP	25.92	■■□□□ 1.74
CNOT7-204	ENST00000518885	FAM160A1	Q05DH4	1040 aa		25.92	■■□□□ 1.74
CNOT7-204	ENST00000518885	BIRC3	Q13489	604 aa		25.92	■■□□□ 1.74
CNOT7-204	ENST00000518885	SOWAHA	Q2M3V2	549 aa		25.92	■■□□□ 1.74
CNOT7-204	ENST00000518885	C4orf50	Q6ZRC1	276 aa		25.92	■■□□□ 1.74
CNOT7-204	ENST00000518885	FMR1NB	Q8N0W7	255 aa	Predicted RBP	25.92	■■□□□ 1.74
CNOT7-204	ENST00000518885	GPR152	Q8TDT2	470 aa		25.92	■■□□□ 1.74
CNOT7-204	ENST00000518885	SMARCD2	Q92925	531 aa		25.92	■■□□□ 1.74
CNOT7-204	ENST00000518885	TCEAL4	Q96EI5	215 aa		25.92	■■□□□ 1.74
CNOT7-204	ENST00000518885	KXD1	Q9BQD3	176 aa		25.92	■■□□□ 1.74
CNOT7-204	ENST00000518885	ZMYM5	Q9UJ78	669 aa		25.92	■■□□□ 1.74
CNOT7-204	ENST00000518885	GABRD	O14764	452 aa		25.91	■■□□□ 1.74
CNOT7-204	ENST00000518885	PDGFB	P01127	241 aa	Predicted RBP	25.91	■■□□□ 1.74
CNOT7-204	ENST00000518885	CDC25C	P30307	473 aa		25.91	■■□□□ 1.74
CNOT7-204	ENST00000518885	PTPN5	P54829	565 aa		25.91	■■□□□ 1.74
CNOT7-204	ENST00000518885	NFIL3	Q16649	462 aa		25.91	■■□□□ 1.74
CNOT7-204	ENST00000518885	SPATA2L	Q8IUW3	424 aa	Predicted RBP	25.91	■■□□□ 1.74
CNOT7-204	ENST00000518885	FUBP3	Q96I24	572 aa	Known RBP eCLIP	25.91	■■□□□ 1.74
CNOT7-204	ENST00000518885	DNAJC25	Q9H1X3	360 aa		25.91	■■□□□ 1.74
CNOT7-204	ENST00000518885	SNX25	Q9H3E2	840 aa		25.91	■■□□□ 1.74
CNOT7-204	ENST00000518885	ARHGEF3	Q9NR81	526 aa		25.91	■■□□□ 1.74
CNOT7-204	ENST00000518885	CDH9	Q9ULB4	789 aa		25.91	■■□□□ 1.74
CNOT7-204	ENST00000518885	MAPK13	O15264	365 aa		25.9	■■□□□ 1.74
CNOT7-204	ENST00000518885	CCR2	P41597	374 aa		25.9	■■□□□ 1.74
CNOT7-204	ENST00000518885	CEP135	Q66GS9	1140 aa		25.9	■■□□□ 1.74
CNOT7-204	ENST00000518885	LRRTM3	Q86VH5	581 aa		25.9	■■□□□ 1.74
CNOT7-204	ENST00000518885	TMC2	Q8TDI7	906 aa		25.9	■■□□□ 1.74
CNOT7-204	ENST00000518885	PARD3B	Q8TEW8	1205 aa		25.9	■■□□□ 1.74
CNOT7-204	ENST00000518885	FAM84A	Q96KN4	292 aa		25.9	■■□□□ 1.74
CNOT7-204	ENST00000518885	ASB16	Q96NS5	453 aa		25.9	■■□□□ 1.74
CNOT7-204	ENST00000518885	CA14	Q9ULX7	337 aa		25.9	■■□□□ 1.74
CNOT7-204	ENST00000518885		A0A1W2PRU2	124 aa		25.89	■■□□□ 1.74
CNOT7-204	ENST00000518885	P4HA1	P13674	534 aa		25.89	■■□□□ 1.74
CNOT7-204	ENST00000518885	WARS	P23381	471 aa	Known RBP	25.89	■■□□□ 1.74
CNOT7-204	ENST00000518885	VCP	P55072	806 aa	Known RBP	25.89	■■□□□ 1.74
CNOT7-204	ENST00000518885	CLDN10	P78369	228 aa		25.89	■■□□□ 1.74
CNOT7-204	ENST00000518885	WDR72	Q3MJ13	1102 aa		25.89	■■□□□ 1.74
CNOT7-204	ENST00000518885	FAM78A	Q5JUQ0	283 aa		25.89	■■□□□ 1.74
CNOT7-204	ENST00000518885	LIMS2	Q7Z4I7	341 aa		25.89	■■□□□ 1.74
CNOT7-204	ENST00000518885	TMC8	Q8IU68	726 aa		25.89	■■□□□ 1.74
CNOT7-204	ENST00000518885	TTC9B	Q8N6N2	239 aa		25.89	■■□□□ 1.74
CNOT7-204	ENST00000518885	TIGD1	Q96MW7	591 aa		25.89	■■□□□ 1.74
CNOT7-204	ENST00000518885	GSDMA	Q96QA5	445 aa		25.89	■■□□□ 1.74
CNOT7-204	ENST00000518885	ATXN3L	Q9H3M9	355 aa		25.89	■■□□□ 1.74
CNOT7-204	ENST00000518885	TRPV4	Q9HBA0	871 aa		25.89	■■□□□ 1.74
CNOT7-204	ENST00000518885	IKBKB	O14920	756 aa		25.88	■■□□□ 1.73
CNOT7-204	ENST00000518885	TACC1	O75410	805 aa		25.88	■■□□□ 1.73
CNOT7-204	ENST00000518885	SOAT2	O75908	522 aa		25.88	■■□□□ 1.73
CNOT7-204	ENST00000518885	CSH1	P0DML2	217 aa		25.88	■■□□□ 1.73
CNOT7-204	ENST00000518885	CSH2	P0DML3	217 aa		25.88	■■□□□ 1.73
CNOT7-204	ENST00000518885	KRT13	P13646	458 aa		25.88	■■□□□ 1.73
CNOT7-204	ENST00000518885	AOC1	P19801	751 aa		25.88	■■□□□ 1.73
CNOT7-204	ENST00000518885	NR2F2	P24468	414 aa		25.88	■■□□□ 1.73
CNOT7-204	ENST00000518885	ACAT1	P24752	427 aa	Known RBP	25.88	■■□□□ 1.73
CNOT7-204	ENST00000518885	GPC5	P78333	572 aa		25.88	■■□□□ 1.73
CNOT7-204	ENST00000518885	TEAD2	Q15562	447 aa		25.88	■■□□□ 1.73
CNOT7-204	ENST00000518885	CFAP221	Q4G0U5	840 aa		25.88	■■□□□ 1.73
CNOT7-204	ENST00000518885	PHLDB3	Q6NSJ2	640 aa		25.88	■■□□□ 1.73
CNOT7-204	ENST00000518885	INTS8	Q75QN2	995 aa	Known RBP	25.88	■■□□□ 1.73
CNOT7-204	ENST00000518885	SHKBP1	Q8TBC3	707 aa		25.88	■■□□□ 1.73
CNOT7-204	ENST00000518885	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	25.88	■■□□□ 1.73
CNOT7-204	ENST00000518885	DEPDC1B	Q8WUY9	529 aa		25.88	■■□□□ 1.73
CNOT7-204	ENST00000518885	SYT15	Q9BQS2	421 aa		25.88	■■□□□ 1.73
CNOT7-204	ENST00000518885	PI4K2A	Q9BTU6	479 aa		25.88	■■□□□ 1.73
CNOT7-204	ENST00000518885	RPP25	Q9BUL9	199 aa	Known RBP	25.88	■■□□□ 1.73

Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms