RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	PCDHAC1	Q9H158	963 aa		5.81	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	FBXO34	Q9NWN3	711 aa		5.81	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	ZSCAN32	Q9NX65	697 aa		5.81	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	FAM30A	Q9NZY2	134 aa		5.81	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	IFT80	Q9P2H3	777 aa	Predicted RBP	5.81	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	SRP68	Q9UHB9	627 aa	Known RBP	5.81	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	UBE2QL1	A1L167	161 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	CDHR4	A6H8M9	788 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	CCP110	O43303	1012 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	HOXA3	O43365	443 aa	Predicted RBP	5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	KIF20A	O95235	890 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	CYP2C9	P11712	490 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	CKMT1A	P12532	417 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	NPPB	P16860	134 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	TPH1	P17752	444 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	VIPR2	P41587	438 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	CPT1A	P50416	773 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	IRX6	P78412	446 aa	Predicted RBP	5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	MPP1	Q00013	466 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	DLX2	Q07687	328 aa	Predicted RBP	5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	UBXN2B	Q14CS0	331 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	INSC	Q1MX18	579 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	ANKS6	Q68DC2	871 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	FAAH2	Q6GMR7	532 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	KIAA0408	Q6ZU52	694 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	LRRTM4	Q86VH4	590 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	C2CD5	Q86YS7	1000 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	CCDC117	Q8IWD4	279 aa	Predicted RBP	5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	ESX1	Q8N693	406 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	FITM2	Q8N6M3	262 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	TXNDC5	Q8NBS9	432 aa	Known RBP	5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	SPPL3	Q8TCT6	385 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	ASB12	Q8WXK4	309 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	PWWP2A	Q96N64	755 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	MOGAT1	Q96PD6	335 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	TCF25	Q9BQ70	676 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	IMPG2	Q9BZV3	1241 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	DHX36	Q9H2U1	1008 aa	Known RBP	5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	RIC8A	Q9NPQ8	531 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	WASH6P	Q9NQA3	447 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	SMC4	Q9NTJ3	1288 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	GGA3	Q9NZ52	723 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	SLC13A4	Q9UKG4	626 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	TBC1D30	Q9Y2I9	924 aa		5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	LAS1L	Q9Y4W2	734 aa	Known RBP	5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	OAS3	Q9Y6K5	1087 aa	Known RBP	5.8	□□□□□ -1.48
CALCOCO2-222	ENST00000514006		A0A0B4J269	797 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	HMX3	A6NHT5	357 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	C9orf118	A6NHY6	69 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	TBKBP1	A7MCY6	615 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006		H7C4K7	107 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	FCHO1	O14526	889 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	SNX2	O60749	519 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	XBP1	P17861	261 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	PAPOLA	P51003	745 aa	Known RBP	5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	RIN1	Q13671	783 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	MLANA	Q16655	118 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	BMT2	Q1RMZ1	405 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	RNF151	Q2KHN1	245 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	ZMYM1	Q5SVZ6	1142 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	TMTC4	Q5T4D3	741 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	RAP1GAP2	Q684P5	730 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	PLAG1	Q6DJT9	500 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	C1orf122	Q6ZSJ8	110 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	XYLT1	Q86Y38	959 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	TMTC1	Q8IUR5	882 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	CCDC28A	Q8IWP9	274 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	FBXO15	Q8NCQ5	510 aa	Predicted RBP	5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	ZFP28	Q8NHY6	868 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	TBC1D15	Q8TC07	691 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	KCNN1	Q92952	543 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	KLHL32	Q96NJ5	620 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	NELL2	Q99435	816 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	INO80B	Q9C086	356 aa	Predicted RBP	5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	MLXIP	Q9HAP2	919 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	XPNPEP3	Q9NQH7	507 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	RASSF1	Q9NS23	344 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	HESX1	Q9UBX0	185 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	CAPN11	Q9UMQ6	739 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	HDAC5	Q9UQL6	1122 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	TMEM98	Q9Y2Y6	226 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	MTO1	Q9Y2Z2	717 aa	Known RBP	5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	HS3ST4	Q9Y661	456 aa		5.79	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	KRTAP9-6	A0A140TA67	174 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006		A0A1W2PRX2	142 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	PMS2P1	A4D2B8	440 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	ADAM23	O75077	832 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	FAM155B	O75949	473 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	STC2	O76061	302 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	USP1	O94782	785 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	ACTL6B	O94805	426 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	GLP2R	O95838	553 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	CKB	P12277	381 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	JUNB	P17275	347 aa	Predicted RBP	5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	FDXR	P22570	491 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	CST5	P28325	142 aa	Predicted RBP	5.78	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms