RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 AVENQ9NQS1 362 aaPredicted RBP17.71■□□□□ 0.43
DDX41-213ENST00000512027 CA14Q9ULX7 337 aa17.71■□□□□ 0.43
DDX41-213ENST00000512027 R3HCC1Q9Y3T6 440 aaKnown RBP17.71■□□□□ 0.43
DDX41-213ENST00000512027 ZFP37Q9Y6Q3 630 aaPredicted RBP17.71■□□□□ 0.43
DDX41-213ENST00000512027 OBSL1O75147 1896 aa17.71■□□□□ 0.43
DDX41-213ENST00000512027 A0A1W2PRU2 124 aa17.7■□□□□ 0.42
DDX41-213ENST00000512027 SRFP11831 508 aa17.7■□□□□ 0.42
DDX41-213ENST00000512027 GPR15P49685 360 aa17.7■□□□□ 0.42
DDX41-213ENST00000512027 MYL6P60660 151 aa17.7■□□□□ 0.42
DDX41-213ENST00000512027 TSPY1Q01534 308 aa17.7■□□□□ 0.42
DDX41-213ENST00000512027 KCNB1Q14721 858 aa17.7■□□□□ 0.42
DDX41-213ENST00000512027 TEAD2Q15562 447 aa17.7■□□□□ 0.42
DDX41-213ENST00000512027 STXBP5Q5T5C0 1151 aa17.7■□□□□ 0.42
DDX41-213ENST00000512027 CYP4A22Q5TCH4 519 aa17.7■□□□□ 0.42
DDX41-213ENST00000512027 TDRD10Q5VZ19 366 aaKnown RBP17.7■□□□□ 0.42
DDX41-213ENST00000512027 CEP135Q66GS9 1140 aa17.7■□□□□ 0.42
DDX41-213ENST00000512027 DCP1BQ8IZD4 617 aaKnown RBP17.7■□□□□ 0.42
DDX41-213ENST00000512027 TOP6BLQ8N6T0 577 aa17.7■□□□□ 0.42
DDX41-213ENST00000512027 FLCNQ8NFG4 579 aa17.7■□□□□ 0.42
DDX41-213ENST00000512027 SHKBP1Q8TBC3 707 aa17.7■□□□□ 0.42
DDX41-213ENST00000512027 PARD3BQ8TEW8 1205 aa17.7■□□□□ 0.42
DDX41-213ENST00000512027 GIPC2Q8TF65 315 aa17.7■□□□□ 0.42
DDX41-213ENST00000512027 NXPE3Q969Y0 559 aa17.7■□□□□ 0.42
DDX41-213ENST00000512027 GTF3C4Q9UKN8 822 aa17.7■□□□□ 0.42
DDX41-213ENST00000512027 PTPRDP23468 1912 aa17.69■□□□□ 0.42
DDX41-213ENST00000512027 KRBA1A5PL33 1030 aa17.69■□□□□ 0.42
DDX41-213ENST00000512027 ATP2C2O75185 946 aa17.69■□□□□ 0.42
DDX41-213ENST00000512027 GADD45BO75293 160 aaPredicted RBP17.69■□□□□ 0.42
DDX41-213ENST00000512027 FCARP24071 287 aa17.69■□□□□ 0.42
DDX41-213ENST00000512027 LMO2P25791 158 aa17.69■□□□□ 0.42
DDX41-213ENST00000512027 EPHA5P54756 1037 aa17.69■□□□□ 0.42
DDX41-213ENST00000512027 PSMC1P62191 440 aaKnown RBP17.69■□□□□ 0.42
DDX41-213ENST00000512027 GPC5P78333 572 aa17.69■□□□□ 0.42
DDX41-213ENST00000512027 MYL7Q01449 175 aa17.69■□□□□ 0.42
DDX41-213ENST00000512027 FAM160A1Q05DH4 1040 aa17.69■□□□□ 0.42
DDX41-213ENST00000512027 PLD1Q13393 1074 aa17.69■□□□□ 0.42
DDX41-213ENST00000512027 INTS6LQ5JSJ4 861 aaKnown RBP17.69■□□□□ 0.42
DDX41-213ENST00000512027 FAM78AQ5JUQ0 283 aa17.69■□□□□ 0.42
DDX41-213ENST00000512027 SDHAF4Q5VUM1 108 aa17.69■□□□□ 0.42
DDX41-213ENST00000512027 CWF19L1Q69YN2 538 aaKnown RBP17.69■□□□□ 0.42
DDX41-213ENST00000512027 TANGO2Q6ICL3 276 aa17.69■□□□□ 0.42
DDX41-213ENST00000512027 MTSS1LQ765P7 747 aa17.69■□□□□ 0.42
DDX41-213ENST00000512027 GPIHBP1Q8IV16 184 aa17.69■□□□□ 0.42
DDX41-213ENST00000512027 SLC9A9Q8IVB4 645 aa17.69■□□□□ 0.42
DDX41-213ENST00000512027 TMEM86AQ8N2M4 240 aa17.69■□□□□ 0.42
DDX41-213ENST00000512027 FAM200AQ8TCP9 573 aa17.69■□□□□ 0.42
DDX41-213ENST00000512027 MMS19Q96T76 1030 aa17.69■□□□□ 0.42
DDX41-213ENST00000512027 PKMYT1Q99640 499 aa17.69■□□□□ 0.42
DDX41-213ENST00000512027 MRPL45Q9BRJ2 306 aaKnown RBP17.69■□□□□ 0.42
DDX41-213ENST00000512027 MFSD1Q9H3U5 465 aa17.69■□□□□ 0.42
DDX41-213ENST00000512027 NME7Q9Y5B8 376 aa17.69■□□□□ 0.42
DDX41-213ENST00000512027 NCANO14594 1321 aa17.69■□□□□ 0.42
DDX41-213ENST00000512027 DENND4CQ5VZ89 1909 aa17.68■□□□□ 0.42
DDX41-213ENST00000512027 ZNF197O14709 1029 aa17.68■□□□□ 0.42
DDX41-213ENST00000512027 GABRDO14764 452 aa17.68■□□□□ 0.42
DDX41-213ENST00000512027 CALUO43852 315 aaPredicted RBP17.68■□□□□ 0.42
DDX41-213ENST00000512027 PRPF40AO75400 957 aaKnown RBP17.68■□□□□ 0.42
DDX41-213ENST00000512027 HAPLN1P10915 354 aaPredicted RBP17.68■□□□□ 0.42
DDX41-213ENST00000512027 NPR3P17342 541 aa17.68■□□□□ 0.42
DDX41-213ENST00000512027 AVPR2P30518 371 aa17.68■□□□□ 0.42
DDX41-213ENST00000512027 BIRC3Q13489 604 aa17.68■□□□□ 0.42
DDX41-213ENST00000512027 LIMS2Q7Z4I7 341 aa17.68■□□□□ 0.42
DDX41-213ENST00000512027 DNAJB7Q7Z6W7 309 aaPredicted RBP17.68■□□□□ 0.42
DDX41-213ENST00000512027 GUF1Q8N442 669 aaKnown RBP17.68■□□□□ 0.42
DDX41-213ENST00000512027 TMEM105Q8N8V8 129 aa17.68■□□□□ 0.42
DDX41-213ENST00000512027 PRSS33Q8NF86 280 aa17.68■□□□□ 0.42
DDX41-213ENST00000512027 SPPL2BQ8TCT7 592 aa17.68■□□□□ 0.42
DDX41-213ENST00000512027 NUP210Q8TEM1 1887 aaPredicted RBP17.68■□□□□ 0.42
DDX41-213ENST00000512027 PSMG2Q969U7 264 aa17.68■□□□□ 0.42
DDX41-213ENST00000512027 ACBD6Q9BR61 282 aa17.68■□□□□ 0.42
DDX41-213ENST00000512027 GDE1Q9NZC3 331 aa17.68■□□□□ 0.42
DDX41-213ENST00000512027 TRAF3IP3Q9Y228 551 aa17.68■□□□□ 0.42
DDX41-213ENST00000512027 PCDHB5Q9Y5E4 795 aa17.68■□□□□ 0.42
DDX41-213ENST00000512027 TICRRQ7Z2Z1 1910 aa17.67■□□□□ 0.42
DDX41-213ENST00000512027 MYBPHLA2RUH7 354 aa17.67■□□□□ 0.42
DDX41-213ENST00000512027 PHACTR2O75167 634 aa17.67■□□□□ 0.42
DDX41-213ENST00000512027 CLSTN1O94985 981 aa17.67■□□□□ 0.42
DDX41-213ENST00000512027 VNN1O95497 513 aa17.67■□□□□ 0.42
DDX41-213ENST00000512027 PDGFRBP09619 1106 aa17.67■□□□□ 0.42
DDX41-213ENST00000512027 NR2F2P24468 414 aa17.67■□□□□ 0.42
DDX41-213ENST00000512027 CYP2F1P24903 491 aa17.67■□□□□ 0.42
DDX41-213ENST00000512027 GABRR2P28476 465 aa17.67■□□□□ 0.42
DDX41-213ENST00000512027 TUFMP49411 452 aaKnown RBP17.67■□□□□ 0.42
DDX41-213ENST00000512027 CYP4F8P98187 520 aa17.67■□□□□ 0.42
DDX41-213ENST00000512027 TRPC3Q13507 836 aa17.67■□□□□ 0.42
DDX41-213ENST00000512027 GRM2Q14416 872 aa17.67■□□□□ 0.42
DDX41-213ENST00000512027 WDR72Q3MJ13 1102 aa17.67■□□□□ 0.42
DDX41-213ENST00000512027 C1orf220Q5T0J3 134 aa17.67■□□□□ 0.42
DDX41-213ENST00000512027 GAREM2Q75VX8 874 aa17.67■□□□□ 0.42
DDX41-213ENST00000512027 EEF2KMTQ96G04 330 aa17.67■□□□□ 0.42
DDX41-213ENST00000512027 SYT15Q9BQS2 421 aa17.67■□□□□ 0.42
DDX41-213ENST00000512027 XYLT2Q9H1B5 865 aa17.67■□□□□ 0.42
DDX41-213ENST00000512027 SLITRK6Q9H5Y7 841 aa17.67■□□□□ 0.42
DDX41-213ENST00000512027 CRTAC1Q9NQ79 661 aa17.67■□□□□ 0.42
DDX41-213ENST00000512027 HSFX1Q9UBD0 423 aa17.67■□□□□ 0.42
DDX41-213ENST00000512027 NXF1Q9UBU9 619 aaKnown RBP17.67■□□□□ 0.42
DDX41-213ENST00000512027 COL4A2P08572 1712 aa17.67■□□□□ 0.42
DDX41-213ENST00000512027 PI15O43692 258 aa17.66■□□□□ 0.42
DDX41-213ENST00000512027 AKAP3O75969 853 aa17.66■□□□□ 0.42
DDX41-213ENST00000512027 C4BPAP04003 597 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms