RNA–Protein interactions for RNA: ENST00000508108.2

CBX3P3-201, Transcript of chromobox 3 pseudogene 3, humanhuman

BASIC

Gene CBX3P3, Length 532 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P3-201ENST00000508108 FKBP10Q96AY3 582 aa4.9□□□□□ -1.63
CBX3P3-201ENST00000508108 CHMP4CQ96CF2 233 aa4.9□□□□□ -1.63
CBX3P3-201ENST00000508108 OSBPL9Q96SU4 736 aa4.9□□□□□ -1.63
CBX3P3-201ENST00000508108 GTPBP4Q9BZE4 634 aaKnown RBP4.9□□□□□ -1.63
CBX3P3-201ENST00000508108 AMBRA1Q9C0C7 1298 aa4.9□□□□□ -1.63
CBX3P3-201ENST00000508108 KMT5AQ9NQR1 393 aa4.9□□□□□ -1.63
CBX3P3-201ENST00000508108 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.9□□□□□ -1.63
CBX3P3-201ENST00000508108 PNPOQ9NVS9 261 aa4.9□□□□□ -1.63
CBX3P3-201ENST00000508108 ZDHHC8Q9ULC8 765 aa4.9□□□□□ -1.63
CBX3P3-201ENST00000508108 RAD54BQ9Y620 910 aa4.9□□□□□ -1.63
CBX3P3-201ENST00000508108 WNT6Q9Y6F9 365 aa4.9□□□□□ -1.63
CBX3P3-201ENST00000508108 MANSC4A6NHS7 340 aaPredicted RBP4.89□□□□□ -1.63
CBX3P3-201ENST00000508108 H3BUI4 141 aa4.89□□□□□ -1.63
CBX3P3-201ENST00000508108 SOAT2O75908 522 aa4.89□□□□□ -1.63
CBX3P3-201ENST00000508108 EXOSC9Q06265 439 aaKnown RBP4.89□□□□□ -1.63
CBX3P3-201ENST00000508108 VPS53Q5VIR6 699 aa4.89□□□□□ -1.63
CBX3P3-201ENST00000508108 FAM136AQ96C01 138 aa4.89□□□□□ -1.63
CBX3P3-201ENST00000508108 ALG8Q9BVK2 526 aa4.89□□□□□ -1.63
CBX3P3-201ENST00000508108 EHD3Q9NZN3 535 aa4.89□□□□□ -1.63
CBX3P3-201ENST00000508108 DKK3Q9UBP4 350 aa4.89□□□□□ -1.63
CBX3P3-201ENST00000508108 ADAM21Q9UKJ8 722 aa4.89□□□□□ -1.63
CBX3P3-201ENST00000508108 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.89□□□□□ -1.63
CBX3P3-201ENST00000508108 GCOM1H8Y6P7 765 aaPredicted RBP4.88□□□□□ -1.63
CBX3P3-201ENST00000508108 PDHA1P08559 390 aa4.88□□□□□ -1.63
CBX3P3-201ENST00000508108 ZFXP17010 805 aaPredicted RBP4.88□□□□□ -1.63
CBX3P3-201ENST00000508108 IBSPP21815 317 aaPredicted RBP4.88□□□□□ -1.63
CBX3P3-201ENST00000508108 ITPKBP27987 946 aa4.88□□□□□ -1.63
CBX3P3-201ENST00000508108 ABCG1P45844 678 aa4.88□□□□□ -1.63
CBX3P3-201ENST00000508108 GCLCP48506 637 aaPredicted RBP4.88□□□□□ -1.63
CBX3P3-201ENST00000508108 TOB1P50616 345 aaPredicted RBP4.88□□□□□ -1.63
CBX3P3-201ENST00000508108 CCT8P50990 548 aa4.88□□□□□ -1.63
CBX3P3-201ENST00000508108 SRSF4Q08170 494 aaKnown RBP4.88□□□□□ -1.63
CBX3P3-201ENST00000508108 FOXF2Q12947 444 aa4.88□□□□□ -1.63
CBX3P3-201ENST00000508108 BOP1Q14137 746 aaKnown RBP4.88□□□□□ -1.63
CBX3P3-201ENST00000508108 TBCCQ15814 346 aa4.88□□□□□ -1.63
CBX3P3-201ENST00000508108 PPP1R32Q7Z5V6 425 aa4.88□□□□□ -1.63
CBX3P3-201ENST00000508108 BRIX1Q8TDN6 353 aaKnown RBP4.88□□□□□ -1.63
CBX3P3-201ENST00000508108 DDX17Q92841 729 aaKnown RBP4.88□□□□□ -1.63
CBX3P3-201ENST00000508108 RFKQ969G6 155 aa4.88□□□□□ -1.63
CBX3P3-201ENST00000508108 TTYH3Q9C0H2 523 aa4.88□□□□□ -1.63
CBX3P3-201ENST00000508108 AASDHPPTQ9NRN7 309 aa4.88□□□□□ -1.63
CBX3P3-201ENST00000508108 IP6K2Q9UHH9 426 aa4.88□□□□□ -1.63
CBX3P3-201ENST00000508108 TTBK1Q5TCY1 1321 aaPredicted RBP4.88□□□□□ -1.63
CBX3P3-201ENST00000508108 PPM1DO15297 605 aa4.87□□□□□ -1.63
CBX3P3-201ENST00000508108 NEK2P51955 445 aa4.87□□□□□ -1.63
CBX3P3-201ENST00000508108 SOX10P56693 466 aa4.87□□□□□ -1.63
CBX3P3-201ENST00000508108 PLS1Q14651 629 aa4.87□□□□□ -1.63
CBX3P3-201ENST00000508108 FAM160B1Q5W0V3 765 aa4.87□□□□□ -1.63
CBX3P3-201ENST00000508108 TMEM108Q6UXF1 575 aa4.87□□□□□ -1.63
CBX3P3-201ENST00000508108 SRRM1Q8IYB3 904 aaKnown RBP4.87□□□□□ -1.63
CBX3P3-201ENST00000508108 KLHDC4Q8TBB5 520 aa4.87□□□□□ -1.63
CBX3P3-201ENST00000508108 DDB2Q92466 427 aa4.87□□□□□ -1.63
CBX3P3-201ENST00000508108 MVB12AQ96EY5 273 aa4.87□□□□□ -1.63
CBX3P3-201ENST00000508108 SLC35A4Q96G79 324 aa4.87□□□□□ -1.63
CBX3P3-201ENST00000508108 GPATCH3Q96I76 525 aa4.87□□□□□ -1.63
CBX3P3-201ENST00000508108 FAM167AQ96KS9 214 aa4.87□□□□□ -1.63
CBX3P3-201ENST00000508108 SLC46A1Q96NT5 459 aa4.87□□□□□ -1.63
CBX3P3-201ENST00000508108 SERHLQ9NQF3 203 aa4.87□□□□□ -1.63
CBX3P3-201ENST00000508108 PADI4Q9UM07 663 aa4.87□□□□□ -1.63
CBX3P3-201ENST00000508108 HNRNPCP07910 306 aaKnown RBP eCLIP4.86□□□□□ -1.63
CBX3P3-201ENST00000508108 CT47B1P0C2W7 299 aaPredicted RBP4.86□□□□□ -1.63
CBX3P3-201ENST00000508108 PF4V1P10720 104 aa4.86□□□□□ -1.63
CBX3P3-201ENST00000508108 PIM1P11309 404 aaPredicted RBP4.86□□□□□ -1.63
CBX3P3-201ENST00000508108 NDUFB7P17568 137 aa4.86□□□□□ -1.63
CBX3P3-201ENST00000508108 HDCP19113 662 aa4.86□□□□□ -1.63
CBX3P3-201ENST00000508108 DRD4P21917 467 aa4.86□□□□□ -1.63
CBX3P3-201ENST00000508108 KCNJ5P48544 419 aa4.86□□□□□ -1.63
CBX3P3-201ENST00000508108 SOX8P57073 446 aa4.86□□□□□ -1.63
CBX3P3-201ENST00000508108 TCF15Q12870 199 aa4.86□□□□□ -1.63
CBX3P3-201ENST00000508108 BMPR2Q13873 1038 aa4.86□□□□□ -1.63
CBX3P3-201ENST00000508108 TMEM119Q4V9L6 283 aa4.86□□□□□ -1.63
CBX3P3-201ENST00000508108 PLAC9Q5JTB6 97 aa4.86□□□□□ -1.63
CBX3P3-201ENST00000508108 FCRLBQ6BAA4 426 aa4.86□□□□□ -1.63
CBX3P3-201ENST00000508108 LAYNQ6UX15 382 aa4.86□□□□□ -1.63
CBX3P3-201ENST00000508108 PTF1AQ7RTS3 328 aa4.86□□□□□ -1.63
CBX3P3-201ENST00000508108 GRAMD1CQ8IYS0 662 aa4.86□□□□□ -1.63
CBX3P3-201ENST00000508108 HASPINQ8TF76 798 aa4.86□□□□□ -1.63
CBX3P3-201ENST00000508108 ATRIPQ8WXE1 791 aa4.86□□□□□ -1.63
CBX3P3-201ENST00000508108 HOOK2Q96ED9 719 aa4.86□□□□□ -1.63
CBX3P3-201ENST00000508108 MAP3K14Q99558 947 aa4.86□□□□□ -1.63
CBX3P3-201ENST00000508108 ARHGEF3Q9NR81 526 aa4.86□□□□□ -1.63
CBX3P3-201ENST00000508108 HESX1Q9UBX0 185 aa4.86□□□□□ -1.63
CBX3P3-201ENST00000508108 PCDHA6Q9UN73 950 aa4.86□□□□□ -1.63
CBX3P3-201ENST00000508108 NXPH3O95157 252 aa4.85□□□□□ -1.63
CBX3P3-201ENST00000508108 UNC5CO95185 931 aa4.85□□□□□ -1.63
CBX3P3-201ENST00000508108 VCAM1P19320 739 aa4.85□□□□□ -1.63
CBX3P3-201ENST00000508108 AKAP5P24588 427 aa4.85□□□□□ -1.63
CBX3P3-201ENST00000508108 CLCN2P51788 898 aa4.85□□□□□ -1.63
CBX3P3-201ENST00000508108 ZNF134P52741 427 aa4.85□□□□□ -1.63
CBX3P3-201ENST00000508108 NKX6-1P78426 367 aaPredicted RBP4.85□□□□□ -1.63
CBX3P3-201ENST00000508108 KHDC1LQ5JSQ8 128 aa4.85□□□□□ -1.63
CBX3P3-201ENST00000508108 ZNF551Q7Z340 670 aaPredicted RBP4.85□□□□□ -1.63
CBX3P3-201ENST00000508108 FAM109AQ8N4B1 249 aa4.85□□□□□ -1.63
CBX3P3-201ENST00000508108 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.85□□□□□ -1.63
CBX3P3-201ENST00000508108 CELF5Q8N6W0 485 aaKnown RBP4.85□□□□□ -1.63
CBX3P3-201ENST00000508108 DPF1Q92782 380 aa4.85□□□□□ -1.63
CBX3P3-201ENST00000508108 POLR3GLQ9BT43 218 aa4.85□□□□□ -1.63
CBX3P3-201ENST00000508108 SLC29A3Q9BZD2 475 aa4.85□□□□□ -1.63
CBX3P3-201ENST00000508108 ARMT1Q9H993 441 aa4.85□□□□□ -1.63
CBX3P3-201ENST00000508108 SARS2Q9NP81 518 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms