RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 SORCS3Q9UPU3 1222 aa16.72■□□□□ 0.27
SCLT1-208ENST00000506368 DRG1Q9Y295 367 aaKnown RBP16.72■□□□□ 0.27
SCLT1-208ENST00000506368 C6orf229H3BNL8 230 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 RIMBP2O15034 1052 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 ATMINO43313 823 aaPredicted RBP16.71■□□□□ 0.27
SCLT1-208ENST00000506368 CYP3A4P08684 503 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 DLDP09622 509 aaKnown RBP16.71■□□□□ 0.27
SCLT1-208ENST00000506368 FAM200BP0CF97 657 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 ZCCHC18P0CG32 403 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 VAV1P15498 845 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 RBM5P52756 815 aaKnown RBP eCLIP16.71■□□□□ 0.27
SCLT1-208ENST00000506368 GABPAQ06546 454 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 ZC2HC1CQ53FD0 456 aaPredicted RBP16.71■□□□□ 0.27
SCLT1-208ENST00000506368 SYDE2Q5VT97 1194 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 SPATA24Q86W54 205 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 ZNF677Q86XU0 584 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 BTBD6Q96KE9 485 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 HSD17B14Q9BPX1 270 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 MAK16Q9BXY0 300 aaKnown RBP16.71■□□□□ 0.27
SCLT1-208ENST00000506368 USP17L15C9J2P7 530 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 USP17L13C9JLJ4 530 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 USP17L11C9JVI0 530 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 USP17L18D6R9N7 530 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 USP17L22D6RA61 530 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 USP17L17D6RBQ6 530 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 USP17L19D6RCP7 530 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 USP17L20D6RJB6 530 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 STRNO43815 780 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 CYP1A1P04798 512 aaPredicted RBP16.71■□□□□ 0.27
SCLT1-208ENST00000506368 DHRS4L1P0CG22 281 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 VPS41P49754 854 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 USP17L24Q0WX57 530 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 PRKD1Q15139 912 aaPredicted RBP16.71■□□□□ 0.27
SCLT1-208ENST00000506368 EAPPQ56P03 285 aaPredicted RBP16.71■□□□□ 0.27
SCLT1-208ENST00000506368 HSP90AA5PQ58FG0 334 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 USP17L6PQ6QN14 398 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 ENOSF1Q7L5Y1 443 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 LRRC43Q8N309 656 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 BANPQ8N9N5 519 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 DGCR14Q96DF8 476 aaKnown RBP16.71■□□□□ 0.27
SCLT1-208ENST00000506368 KCNK13Q9HB14 408 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 PCDHA1Q9Y5I3 950 aa16.71■□□□□ 0.27
SCLT1-208ENST00000506368 USP17L10C9JJH3 530 aa16.7■□□□□ 0.26
SCLT1-208ENST00000506368 FCHO1O14526 889 aa16.7■□□□□ 0.26
SCLT1-208ENST00000506368 PROSCO94903 275 aa16.7■□□□□ 0.26
SCLT1-208ENST00000506368 RALAP11233 206 aa16.7■□□□□ 0.26
SCLT1-208ENST00000506368 ADRA1DP25100 572 aa16.7■□□□□ 0.26
SCLT1-208ENST00000506368 MXI1P50539 228 aa16.7■□□□□ 0.26
SCLT1-208ENST00000506368 NEK3P51956 506 aa16.7■□□□□ 0.26
SCLT1-208ENST00000506368 COG2Q14746 738 aa16.7■□□□□ 0.26
SCLT1-208ENST00000506368 SAMD1Q6SPF0 538 aaPredicted RBP16.7■□□□□ 0.26
SCLT1-208ENST00000506368 PDSS2Q86YH6 399 aa16.7■□□□□ 0.26
SCLT1-208ENST00000506368 OGFOD1Q8N543 542 aa16.7■□□□□ 0.26
SCLT1-208ENST00000506368 ATP11CQ8NB49 1132 aa16.7■□□□□ 0.26
SCLT1-208ENST00000506368 OR6Y1Q8NGX8 325 aa16.7■□□□□ 0.26
SCLT1-208ENST00000506368 JADE3Q92613 823 aa16.7■□□□□ 0.26
SCLT1-208ENST00000506368 PWWP2AQ96N64 755 aa16.7■□□□□ 0.26
SCLT1-208ENST00000506368 CATSPER2Q96P56 530 aa16.7■□□□□ 0.26
SCLT1-208ENST00000506368 NACC1Q96RE7 527 aa16.7■□□□□ 0.26
SCLT1-208ENST00000506368 ZCWPW1Q9H0M4 648 aa16.7■□□□□ 0.26
SCLT1-208ENST00000506368 TIMMDC1Q9NPL8 285 aa16.7■□□□□ 0.26
SCLT1-208ENST00000506368 WASF2Q9Y6W5 498 aa16.7■□□□□ 0.26
SCLT1-208ENST00000506368 ZHX2Q9Y6X8 837 aa16.7■□□□□ 0.26
SCLT1-208ENST00000506368 COL4A5P29400 1685 aa16.7■□□□□ 0.26
SCLT1-208ENST00000506368 GAKO14976 1311 aa16.7■□□□□ 0.26
SCLT1-208ENST00000506368 SBF1O95248 1867 aa16.7■□□□□ 0.26
SCLT1-208ENST00000506368 SPECC1L-ADORA2AF8WAN1 911 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 MEIS2O14770 477 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 RAD21O60216 631 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 FGFR1P11362 822 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 UQCRBP14927 111 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 CPA3P15088 417 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 SULT2A1Q06520 285 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 ODR4Q5SWX8 454 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 TCP10LQ8TDR4 215 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 BTBD9Q96Q07 612 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 TAGLN3Q9UI15 199 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 GGA1Q9UJY5 639 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 NUMBLQ9Y6R0 609 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 B2RBV5 119 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 MSH4O15457 936 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 CYP26A1O43174 497 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 ITGA2BP08514 1039 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 RHBDL3P58872 404 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 PPP2R5CQ13362 524 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 AOC3Q16853 763 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 QRICH1Q2TAL8 776 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 CERKLQ49MI3 558 aaPredicted RBP16.69■□□□□ 0.26
SCLT1-208ENST00000506368 RIPOR1Q6ZS17 1223 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 PRUNE1Q86TP1 453 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 SLC47A2Q86VL8 602 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 RTKN2Q8IZC4 609 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 WWP1Q9H0M0 922 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 ACSS3Q9H6R3 686 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 PREBQ9HCU5 417 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 PLK2Q9NYY3 685 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 PLA2G4CQ9UP65 541 aa16.69■□□□□ 0.26
SCLT1-208ENST00000506368 R3HDM2Q9Y2K5 976 aaKnown RBP16.69■□□□□ 0.26
SCLT1-208ENST00000506368 IQANK1A0A1B0GTG1 560 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 A0A1W2PPM1 405 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms