RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 A0A1W2PQJ5 194 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 CASTOR2A6NHX0 329 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 H0YCG3 227 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 PTGESO14684 152 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 MAPK13O15264 365 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 CCL16O15467 120 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 TGFB1I1O43294 461 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 CCP110O43303 1012 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 TBC1D4O60343 1298 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 ECI2O75521 394 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 PRPF6O94906 941 aaKnown RBP11.58□□□□□ -0.56
CPNE4-206ENST00000505957 NR2F2P24468 414 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 NMT1P30419 496 aaKnown RBP11.58□□□□□ -0.56
CPNE4-206ENST00000505957 ATXN1P54253 815 aaKnown RBP11.58□□□□□ -0.56
CPNE4-206ENST00000505957 MCCD1P59942 119 aaPredicted RBP11.58□□□□□ -0.56
CPNE4-206ENST00000505957 LMNB2Q03252 620 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 ADAM9Q13443 819 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 NAB2Q15742 525 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 PABPC1LQ4VXU2 614 aaKnown RBP11.58□□□□□ -0.56
CPNE4-206ENST00000505957 CDCA2Q69YH5 1023 aaPredicted RBP11.58□□□□□ -0.56
CPNE4-206ENST00000505957 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.58□□□□□ -0.56
CPNE4-206ENST00000505957 ZNF852Q6ZMS4 543 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 MAMSTRQ6ZN01 415 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 HS2ST1Q7LGA3 356 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 CDR2LQ86X02 465 aaPredicted RBP11.58□□□□□ -0.56
CPNE4-206ENST00000505957 CEP57Q86XR8 500 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 NPAS3Q8IXF0 933 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 SLC7A14Q8TBB6 771 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 CNTNAP3BQ96NU0 1288 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 CNTNAP3Q9BZ76 1288 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 POLR3FQ9H1D9 316 aaPredicted RBP11.58□□□□□ -0.56
CPNE4-206ENST00000505957 NDST4Q9H3R1 872 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 FZD8Q9H461 694 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 AVENQ9NQS1 362 aaPredicted RBP11.58□□□□□ -0.56
CPNE4-206ENST00000505957 PRMT8Q9NR22 394 aaPredicted RBP11.58□□□□□ -0.56
CPNE4-206ENST00000505957 DNMT3BQ9UBC3 853 aaKnown RBP11.58□□□□□ -0.56
CPNE4-206ENST00000505957 CACNG4Q9UBN1 327 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 POLIQ9UNA4 740 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 MRPS17Q9Y2R5 130 aaKnown RBP11.58□□□□□ -0.56
CPNE4-206ENST00000505957 EPG5Q9HCE0 2579 aa11.58□□□□□ -0.56
CPNE4-206ENST00000505957 TDRD15B5MCY1 1934 aaKnown RBP11.57□□□□□ -0.56
CPNE4-206ENST00000505957 TMEM189-UBE2V1I3L0A0 370 aa11.57□□□□□ -0.56
CPNE4-206ENST00000505957 K7ENM7 598 aa11.57□□□□□ -0.56
CPNE4-206ENST00000505957 ADAM12O43184 909 aa11.57□□□□□ -0.56
CPNE4-206ENST00000505957 NR3C1P04150 777 aa11.57□□□□□ -0.56
CPNE4-206ENST00000505957 FGFR3P22607 806 aa11.57□□□□□ -0.56
CPNE4-206ENST00000505957 TARSP26639 723 aaKnown RBP11.57□□□□□ -0.56
CPNE4-206ENST00000505957 OR1D2P34982 312 aa11.57□□□□□ -0.56
CPNE4-206ENST00000505957 FZD5Q13467 585 aa11.57□□□□□ -0.56
CPNE4-206ENST00000505957 CCDC40Q4G0X9 1142 aa11.57□□□□□ -0.56
CPNE4-206ENST00000505957 TPRG1Q6ZUI0 275 aa11.57□□□□□ -0.56
CPNE4-206ENST00000505957 HASPINQ8TF76 798 aa11.57□□□□□ -0.56
CPNE4-206ENST00000505957 ACCSQ96QU6 501 aa11.57□□□□□ -0.56
CPNE4-206ENST00000505957 KXD1Q9BQD3 176 aa11.57□□□□□ -0.56
CPNE4-206ENST00000505957 RTKNQ9BST9 563 aa11.57□□□□□ -0.56
CPNE4-206ENST00000505957 MTRRQ9UBK8 725 aa11.57□□□□□ -0.56
CPNE4-206ENST00000505957 CAPN11Q9UMQ6 739 aa11.57□□□□□ -0.56
CPNE4-206ENST00000505957 SMG5Q9UPR3 1016 aaKnown RBP11.57□□□□□ -0.56
CPNE4-206ENST00000505957 SIK3Q9Y2K2 1263 aa11.57□□□□□ -0.56
CPNE4-206ENST00000505957 BACE2Q9Y5Z0 518 aa11.57□□□□□ -0.56
CPNE4-206ENST00000505957 LRRIQ4A6NIV6 560 aa11.56□□□□□ -0.56
CPNE4-206ENST00000505957 SFI1A8K8P3 1242 aa11.56□□□□□ -0.56
CPNE4-206ENST00000505957 RECQL4O94761 1208 aa11.56□□□□□ -0.56
CPNE4-206ENST00000505957 EPB41P11171 864 aaKnown RBP11.56□□□□□ -0.56
CPNE4-206ENST00000505957 CD72P21854 359 aa11.56□□□□□ -0.56
CPNE4-206ENST00000505957 TGM1P22735 817 aa11.56□□□□□ -0.56
CPNE4-206ENST00000505957 SMTNP53814 917 aa11.56□□□□□ -0.56
CPNE4-206ENST00000505957 ENPEPQ07075 957 aa11.56□□□□□ -0.56
CPNE4-206ENST00000505957 ADCY1Q08828 1119 aa11.56□□□□□ -0.56
CPNE4-206ENST00000505957 DMP1Q13316 513 aaPredicted RBP11.56□□□□□ -0.56
CPNE4-206ENST00000505957 CEP135Q66GS9 1140 aa11.56□□□□□ -0.56
CPNE4-206ENST00000505957 MAP4K3Q8IVH8 894 aa11.56□□□□□ -0.56
CPNE4-206ENST00000505957 ZBTB8OSQ8IWT0 167 aa11.56□□□□□ -0.56
CPNE4-206ENST00000505957 TMEM161BQ8NDZ6 487 aa11.56□□□□□ -0.56
CPNE4-206ENST00000505957 DNASE1L2Q92874 299 aa11.56□□□□□ -0.56
CPNE4-206ENST00000505957 ELSPBP1Q96BH3 223 aa11.56□□□□□ -0.56
CPNE4-206ENST00000505957 DNAJC7Q99615 494 aa11.56□□□□□ -0.56
CPNE4-206ENST00000505957 BAG1Q99933 345 aaPredicted RBP11.56□□□□□ -0.56
CPNE4-206ENST00000505957 IER2Q9BTL4 223 aa11.56□□□□□ -0.56
CPNE4-206ENST00000505957 C2orf40Q9H1Z8 148 aa11.56□□□□□ -0.56
CPNE4-206ENST00000505957 PDZD7Q9H5P4 517 aa11.56□□□□□ -0.56
CPNE4-206ENST00000505957 AGPAT3Q9NRZ7 376 aa11.56□□□□□ -0.56
CPNE4-206ENST00000505957 HCFC1R1Q9NWW0 138 aa11.56□□□□□ -0.56
CPNE4-206ENST00000505957 SNTG2Q9NY99 539 aa11.56□□□□□ -0.56
CPNE4-206ENST00000505957 ARMCX3Q9UH62 379 aaPredicted RBP11.56□□□□□ -0.56
CPNE4-206ENST00000505957 CDV3Q9UKY7 258 aaKnown RBP11.56□□□□□ -0.56
CPNE4-206ENST00000505957 EXOC7Q9UPT5 735 aa11.56□□□□□ -0.56
CPNE4-206ENST00000505957 MRPS23Q9Y3D9 190 aaKnown RBP11.56□□□□□ -0.56
CPNE4-206ENST00000505957 DAAM1Q9Y4D1 1078 aa11.56□□□□□ -0.56
CPNE4-206ENST00000505957 MYH11P35749 1972 aa11.56□□□□□ -0.56
CPNE4-206ENST00000505957 ARHGEF37A1IGU5 675 aa11.55□□□□□ -0.56
CPNE4-206ENST00000505957 GTPBP10A4D1E9 387 aaKnown RBP11.55□□□□□ -0.56
CPNE4-206ENST00000505957 SHISA7A6NL88 538 aa11.55□□□□□ -0.56
CPNE4-206ENST00000505957 ACKR2O00590 384 aa11.55□□□□□ -0.56
CPNE4-206ENST00000505957 MAN2B1O00754 1011 aa11.55□□□□□ -0.56
CPNE4-206ENST00000505957 MICAL2O94851 1124 aa11.55□□□□□ -0.56
CPNE4-206ENST00000505957 TUBB4AP04350 444 aa11.55□□□□□ -0.56
CPNE4-206ENST00000505957 RHOP08100 348 aa11.55□□□□□ -0.56
CPNE4-206ENST00000505957 CASP14P31944 242 aa11.55□□□□□ -0.56
CPNE4-206ENST00000505957 PSMC2P35998 433 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms