RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 PABPC4LP0CB38 370 aaKnown RBP6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 PLCG1P19174 1290 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 ENTPD1P49961 510 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 PLTPP55058 493 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 OCRLQ01968 901 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 DNAJC3Q13217 504 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 SERINC3Q13530 473 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 NCOA4Q13772 614 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 KIF22Q14807 665 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 SF3B4Q15427 424 aaKnown RBP eCLIP6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 FXNQ16595 210 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 CTC1Q2NKJ3 1217 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 ASTE1Q2TB18 679 aaPredicted RBP6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 MYLK3Q32MK0 819 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 PDXDC2PQ6P474 469 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 RRAGAQ7L523 313 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 MILR1Q7Z6M3 343 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 VSIG1Q86XK7 387 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 ERMNQ8TAM6 284 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 FNDC8Q8TC99 324 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 POP1Q99575 1024 aaKnown RBP6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 TUBGCP2Q9BSJ2 902 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 KLHL4Q9C0H6 718 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 DNAJC18Q9H819 358 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 ZDHHC18Q9NUE0 388 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 EXOC1Q9NV70 894 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 FAIMQ9NVQ4 179 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 BTBD7Q9P203 1132 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 DDX25Q9UHL0 483 aaKnown RBP6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 PPM1HQ9ULR3 514 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 IPPQ9Y573 584 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 PNMA6FA0A0J9YX94 578 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 CCDC160A6NGH7 325 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 ARHGAP33O14559 1287 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 PDE5AO76074 875 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 PSMG1O95456 288 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 TFAP2AP05549 437 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 PGRP06401 933 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 TNFAIP3P21580 790 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 STAT3P40763 770 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 BPIFB3P59826 476 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 CDC16Q13042 620 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 THOC5Q13769 683 aaKnown RBP6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 SPA17Q15506 151 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 NPY5RQ15761 445 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 GPATCH4Q5T3I0 446 aaKnown RBP6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 FAAH2Q6GMR7 532 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 NEPROQ6NW34 567 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 LVRNQ6Q4G3 990 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 UNC5DQ6UXZ4 953 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 TMEM179Q6ZVK1 233 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 CACNA2D4Q7Z3S7 1137 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 NLRX1Q86UT6 975 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 TMPRSS6Q8IU80 811 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 ARHGAP24Q8N264 748 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 METTL13Q8N6R0 699 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 GRIN3AQ8TCU5 1115 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 DQX1Q8TE96 717 aaKnown RBP6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 ARHGEF2Q92974 986 aaKnown RBP6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 TGS1Q96RS0 853 aaKnown RBP6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 HNRNPABQ99729 332 aaKnown RBP6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 ARL8BQ9NVJ2 186 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 PDP2Q9P2J9 529 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 KANSL3Q9P2N6 904 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 RWDD2AQ9UIY3 292 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 ZNRF3Q9ULT6 936 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 NOC2LQ9Y3T9 749 aaKnown RBP6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 COL5A3P25940 1745 aaPredicted RBP6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 WDR91A4D1P6 747 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 MOXD2PA6NHM9 499 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 RASA4BC9J798 803 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 H3BSA7 217 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 ZBTB5O15062 677 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 RGS16O15492 202 aaPredicted RBP6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 RASA4O43374 803 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 ADCY3O60266 1144 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 SKIP12755 728 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 ALAS1P13196 640 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 ATP6V1B1P15313 513 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 ZFXP17010 805 aaPredicted RBP6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 JAG1P78504 1218 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 SLC34A1Q06495 639 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 AP1B1Q10567 949 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 PARP6Q2NL67 630 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 GRAMD1BQ3KR37 738 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 NADK2Q4G0N4 442 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 DLK2Q6UY11 383 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 ANO5Q75V66 913 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 PPM1KQ8N3J5 372 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 DIS3LQ8TF46 1054 aaKnown RBP6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 RUBCNQ92622 972 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 TMIGD2Q96BF3 282 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 EGLN2Q96KS0 407 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 CATSPER2Q96P56 530 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 ERP44Q9BS26 406 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 POLR3CQ9BUI4 534 aaPredicted RBP6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 SPZ1Q9BXG8 430 aa6.08□□□□□ -1.44
SOX2-OT-218ENST00000498731 ZNF341Q9BYN7 854 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms