RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 ADAM2Q99965 735 aa17.38■□□□□ 0.37
HLA-A-208ENST00000496081 SELENOOQ9BVL4 669 aa17.38■□□□□ 0.37
HLA-A-208ENST00000496081 MRPL47Q9HD33 250 aaKnown RBP17.38■□□□□ 0.37
HLA-A-208ENST00000496081 PAK6Q9NQU5 681 aaPredicted RBP17.38■□□□□ 0.37
HLA-A-208ENST00000496081 MIOSQ9NXC5 875 aa17.38■□□□□ 0.37
HLA-A-208ENST00000496081 CYTH4Q9UIA0 394 aa17.38■□□□□ 0.37
HLA-A-208ENST00000496081 KIAA1257Q9ULG3 409 aa17.38■□□□□ 0.37
HLA-A-208ENST00000496081 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.38■□□□□ 0.37
HLA-A-208ENST00000496081 ARL5CA6NH57 179 aa17.38■□□□□ 0.37
HLA-A-208ENST00000496081 MIF4GDA9UHW6 222 aaKnown RBP17.38■□□□□ 0.37
HLA-A-208ENST00000496081 CEP104O60308 925 aa17.38■□□□□ 0.37
HLA-A-208ENST00000496081 MICAL2O94851 1124 aa17.38■□□□□ 0.37
HLA-A-208ENST00000496081 MYCP01106 439 aaPredicted RBP17.38■□□□□ 0.37
HLA-A-208ENST00000496081 RHOXF2BP0C7M4 288 aa17.38■□□□□ 0.37
HLA-A-208ENST00000496081 CDK7P50613 346 aa17.38■□□□□ 0.37
HLA-A-208ENST00000496081 RNASE9P60153 205 aaKnown RBP17.38■□□□□ 0.37
HLA-A-208ENST00000496081 MBTPS1Q14703 1052 aa17.38■□□□□ 0.37
HLA-A-208ENST00000496081 MTFR1Q15390 333 aa17.38■□□□□ 0.37
HLA-A-208ENST00000496081 SV2CQ496J9 727 aa17.38■□□□□ 0.37
HLA-A-208ENST00000496081 SGO2Q562F6 1265 aa17.38■□□□□ 0.37
HLA-A-208ENST00000496081 DCAF12L1Q5VU92 463 aa17.38■□□□□ 0.37
HLA-A-208ENST00000496081 ERICH1Q86X53 443 aa17.38■□□□□ 0.37
HLA-A-208ENST00000496081 ACTRT1Q8TDG2 376 aa17.38■□□□□ 0.37
HLA-A-208ENST00000496081 CD101Q93033 1021 aa17.38■□□□□ 0.37
HLA-A-208ENST00000496081 RHOXF2Q9BQY4 288 aa17.38■□□□□ 0.37
HLA-A-208ENST00000496081 SLC38A7Q9NVC3 462 aa17.38■□□□□ 0.37
HLA-A-208ENST00000496081 SCINQ9Y6U3 715 aa17.38■□□□□ 0.37
HLA-A-208ENST00000496081 TCRBV5S1A1TA0A578 114 aa17.37■□□□□ 0.37
HLA-A-208ENST00000496081 DNM1LO00429 736 aa17.37■□□□□ 0.37
HLA-A-208ENST00000496081 THP07101 528 aa17.37■□□□□ 0.37
HLA-A-208ENST00000496081 H2AFXP16104 143 aaPredicted RBP17.37■□□□□ 0.37
HLA-A-208ENST00000496081 LILRA4P59901 499 aa17.37■□□□□ 0.37
HLA-A-208ENST00000496081 FBXO38Q6PIJ6 1188 aa17.37■□□□□ 0.37
HLA-A-208ENST00000496081 LIMS2Q7Z4I7 341 aa17.37■□□□□ 0.37
HLA-A-208ENST00000496081 CTU1Q7Z7A3 348 aaKnown RBP17.37■□□□□ 0.37
HLA-A-208ENST00000496081 RASGEF1CQ8N431 466 aa17.37■□□□□ 0.37
HLA-A-208ENST00000496081 MMGT1Q8N4V1 131 aa17.37■□□□□ 0.37
HLA-A-208ENST00000496081 MSANTD4Q8NCY6 345 aa17.37■□□□□ 0.37
HLA-A-208ENST00000496081 UBE2Q2Q8WVN8 375 aa17.37■□□□□ 0.37
HLA-A-208ENST00000496081 KBTBD7Q8WVZ9 684 aa17.37■□□□□ 0.37
HLA-A-208ENST00000496081 ALG3Q92685 438 aa17.37■□□□□ 0.37
HLA-A-208ENST00000496081 KRT35Q92764 455 aa17.37■□□□□ 0.37
HLA-A-208ENST00000496081 PARD6BQ9BYG5 372 aa17.37■□□□□ 0.37
HLA-A-208ENST00000496081 TSPYL2Q9H2G4 693 aaPredicted RBP17.37■□□□□ 0.37
HLA-A-208ENST00000496081 PARVAQ9NVD7 372 aa17.37■□□□□ 0.37
HLA-A-208ENST00000496081 PTPN20Q4JDL3 420 aa17.36■□□□□ 0.37
HLA-A-208ENST00000496081 DPH6Q7L8W6 267 aa17.36■□□□□ 0.37
HLA-A-208ENST00000496081 ACOT1Q86TX2 421 aa17.36■□□□□ 0.37
HLA-A-208ENST00000496081 UNC93AQ86WB7 457 aa17.36■□□□□ 0.37
HLA-A-208ENST00000496081 C12orf29Q8N999 325 aa17.36■□□□□ 0.37
HLA-A-208ENST00000496081 RNF169Q8NCN4 708 aa17.36■□□□□ 0.37
HLA-A-208ENST00000496081 OR6B3Q8NGW1 331 aa17.36■□□□□ 0.37
HLA-A-208ENST00000496081 DEFB118Q96PH6 123 aa17.36■□□□□ 0.37
HLA-A-208ENST00000496081 WNT8AQ9H1J5 351 aa17.36■□□□□ 0.37
HLA-A-208ENST00000496081 CARD9Q9H257 536 aa17.36■□□□□ 0.37
HLA-A-208ENST00000496081 M0QYV0 167 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 MYO1FO00160 1098 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 SPOPO43791 374 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 GJB6O95452 261 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 FGFR1P11362 822 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 IGFBP6P24592 240 aaPredicted RBP17.35■□□□□ 0.37
HLA-A-208ENST00000496081 GPD2P43304 727 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 MARCKSL1P49006 195 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 PEX5P50542 639 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 SCNN1GP51170 649 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 LCLAT1Q6UWP7 414 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 APPL2Q8NEU8 664 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 FEZF2Q8TBJ5 459 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 RSAD1Q9HA92 442 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 RBM12Q9NTZ6 932 aaKnown RBP17.35■□□□□ 0.37
HLA-A-208ENST00000496081 CACNG4Q9UBN1 327 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 L1RE1Q9UN81 338 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 A8MXQ7 604 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 CTNNA2P26232 953 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 CYP4A22Q5TCH4 519 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 RTN4RL1Q86UN2 441 aaPredicted RBP17.35■□□□□ 0.37
HLA-A-208ENST00000496081 FAM126BQ8IXS8 530 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 UBL4BQ8N7F7 174 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 UBA3Q8TBC4 463 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 PGBD4Q96DM1 585 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 CPXM1Q96SM3 734 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 PNKPQ96T60 521 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.35■□□□□ 0.37
HLA-A-208ENST00000496081 SEZ6LQ9BYH1 1024 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 RNF216Q9NWF9 866 aaPredicted RBP17.35■□□□□ 0.37
HLA-A-208ENST00000496081 TJP2Q9UDY2 1190 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 TSPAN16Q9UKR8 245 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 PCDHA3Q9Y5H8 950 aa17.35■□□□□ 0.37
HLA-A-208ENST00000496081 CCDC66A2RUB6 948 aa17.34■□□□□ 0.37
HLA-A-208ENST00000496081 TMEM191CA6NGB0 347 aa17.34■□□□□ 0.37
HLA-A-208ENST00000496081 PGRMC1O00264 195 aaKnown RBP17.34■□□□□ 0.37
HLA-A-208ENST00000496081 HCRTO43612 131 aa17.34■□□□□ 0.37
HLA-A-208ENST00000496081 HUS1O60921 280 aa17.34■□□□□ 0.37
HLA-A-208ENST00000496081 PROSCO94903 275 aa17.34■□□□□ 0.37
HLA-A-208ENST00000496081 SKIP12755 728 aa17.34■□□□□ 0.37
HLA-A-208ENST00000496081 CCL5P13501 91 aa17.34■□□□□ 0.37
HLA-A-208ENST00000496081 IBSPP21815 317 aaPredicted RBP17.34■□□□□ 0.37
HLA-A-208ENST00000496081 CTNNA1P35221 906 aaKnown RBP17.34■□□□□ 0.37
HLA-A-208ENST00000496081 GNL1P36915 607 aaPredicted RBP17.34■□□□□ 0.37
HLA-A-208ENST00000496081 CLCNKBP51801 687 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms