RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 NLRC5Q86WI3 1866 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 TRIOBPQ9H2D6 2365 aa12.33□□□□□ -0.44
LSM2-214ENST00000493387 KIAA1671Q9BY89 1806 aa12.32□□□□□ -0.44
LSM2-214ENST00000493387 GOLGA6L6A8MZA4 724 aa12.32□□□□□ -0.44
LSM2-214ENST00000493387 TBC1D4O60343 1298 aa12.32□□□□□ -0.44
LSM2-214ENST00000493387 PAEPP09466 180 aa12.32□□□□□ -0.44
LSM2-214ENST00000493387 KRT5P13647 590 aa12.32□□□□□ -0.44
LSM2-214ENST00000493387 CD58P19256 250 aa12.32□□□□□ -0.44
LSM2-214ENST00000493387 ACO1P21399 889 aaKnown RBP12.32□□□□□ -0.44
LSM2-214ENST00000493387 NDST1P52848 882 aa12.32□□□□□ -0.44
LSM2-214ENST00000493387 ZBED6P86452 979 aa12.32□□□□□ -0.44
LSM2-214ENST00000493387 APBA1Q02410 837 aa12.32□□□□□ -0.44
LSM2-214ENST00000493387 PTPN14Q15678 1187 aa12.32□□□□□ -0.44
LSM2-214ENST00000493387 SLC8B1Q6J4K2 584 aa12.32□□□□□ -0.44
LSM2-214ENST00000493387 TMEM270Q6UE05 265 aa12.32□□□□□ -0.44
LSM2-214ENST00000493387 SPRED2Q7Z698 418 aa12.32□□□□□ -0.44
LSM2-214ENST00000493387 OSTM1Q86WC4 334 aa12.32□□□□□ -0.44
LSM2-214ENST00000493387 CRYBG2Q8N1P7 616 aa12.32□□□□□ -0.44
LSM2-214ENST00000493387 KAT5Q92993 513 aa12.32□□□□□ -0.44
LSM2-214ENST00000493387 MRPL38Q96DV4 380 aaKnown RBP12.32□□□□□ -0.44
LSM2-214ENST00000493387 TMEM176AQ96HP8 235 aa12.32□□□□□ -0.44
LSM2-214ENST00000493387 ARID3AQ99856 593 aa12.32□□□□□ -0.44
LSM2-214ENST00000493387 SYT15Q9BQS2 421 aa12.32□□□□□ -0.44
LSM2-214ENST00000493387 ZCWPW1Q9H0M4 648 aa12.32□□□□□ -0.44
LSM2-214ENST00000493387 NLRC4Q9NPP4 1024 aa12.32□□□□□ -0.44
LSM2-214ENST00000493387 MAFFQ9ULX9 164 aa12.32□□□□□ -0.44
LSM2-214ENST00000493387 CAPN11Q9UMQ6 739 aa12.32□□□□□ -0.44
LSM2-214ENST00000493387 LUC7L2Q9Y383 392 aaKnown RBP12.32□□□□□ -0.44
LSM2-214ENST00000493387 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.31□□□□□ -0.44
LSM2-214ENST00000493387 C2orf71A6NGG8 1288 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 F8VZ95 297 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 FOXN3O00409 490 aaPredicted RBP12.31□□□□□ -0.44
LSM2-214ENST00000493387 C2CD2LO14523 706 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 EPHB6O15197 1021 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 ADH1AP07327 375 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 PDGFRBP09619 1106 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 PTPN1P18031 435 aaKnown RBP12.31□□□□□ -0.44
LSM2-214ENST00000493387 DNAJB1P25685 340 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 CA8P35219 290 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 SOX5P35711 763 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 USP8P40818 1118 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 NDUFV1P49821 464 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 JAM2P57087 298 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 ERVFC1P60507 584 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 PTK2Q05397 1052 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 RAB33AQ14088 237 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 NFE2Q16621 373 aaPredicted RBP12.31□□□□□ -0.44
LSM2-214ENST00000493387 TSR1Q2NL82 804 aaKnown RBP12.31□□□□□ -0.44
LSM2-214ENST00000493387 INTS6LQ5JSJ4 861 aaKnown RBP12.31□□□□□ -0.44
LSM2-214ENST00000493387 HABP4Q5JVS0 413 aaKnown RBP12.31□□□□□ -0.44
LSM2-214ENST00000493387 PLPP4Q5VZY2 271 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 TPGS2Q68CL5 300 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 PRSS55Q6UWB4 352 aaPredicted RBP12.31□□□□□ -0.44
LSM2-214ENST00000493387 TMC6Q7Z403 805 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 DRC7Q8IY82 874 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 FAM71AQ8IYT1 594 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 RBBP8NLQ8NC74 664 aaPredicted RBP12.31□□□□□ -0.44
LSM2-214ENST00000493387 B3GALNT2Q8NCR0 500 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 WHAMMQ8TF30 809 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 GDPD5Q8WTR4 605 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 C2orf15Q8WU43 125 aaKnown RBP12.31□□□□□ -0.44
LSM2-214ENST00000493387 B3GALT6Q96L58 329 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 HEXIM2Q96MH2 286 aaKnown RBP12.31□□□□□ -0.44
LSM2-214ENST00000493387 RTP3Q9BQQ7 232 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 TTYH3Q9C0H2 523 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 ATP8B3O60423 1300 aa12.31□□□□□ -0.44
LSM2-214ENST00000493387 MYO9BQ13459 2157 aa12.3□□□□□ -0.44
LSM2-214ENST00000493387 EPOPA6NHQ4 379 aa12.3□□□□□ -0.44
LSM2-214ENST00000493387 SOX1O00570 391 aaPredicted RBP12.3□□□□□ -0.44
LSM2-214ENST00000493387 VDRP11473 427 aa12.3□□□□□ -0.44
LSM2-214ENST00000493387 FERP16591 822 aa12.3□□□□□ -0.44
LSM2-214ENST00000493387 LMO2P25791 158 aa12.3□□□□□ -0.44
LSM2-214ENST00000493387 ZNF132P52740 706 aa12.3□□□□□ -0.44
LSM2-214ENST00000493387 RAD23BP54727 409 aa12.3□□□□□ -0.44
LSM2-214ENST00000493387 GPR17Q13304 367 aa12.3□□□□□ -0.44
LSM2-214ENST00000493387 CAMK1Q14012 370 aa12.3□□□□□ -0.44
LSM2-214ENST00000493387 STILQ15468 1287 aa12.3□□□□□ -0.44
LSM2-214ENST00000493387 PTPN21Q16825 1174 aa12.3□□□□□ -0.44
LSM2-214ENST00000493387 FAM171BQ6P995 826 aa12.3□□□□□ -0.44
LSM2-214ENST00000493387 C4orf50Q6ZRC1 276 aa12.3□□□□□ -0.44
LSM2-214ENST00000493387 ACOT1Q86TX2 421 aa12.3□□□□□ -0.44
LSM2-214ENST00000493387 OR10T2Q8NGX3 314 aa12.3□□□□□ -0.44
LSM2-214ENST00000493387 MYCBPAPQ8TBZ2 947 aa12.3□□□□□ -0.44
LSM2-214ENST00000493387 BAP1Q92560 729 aa12.3□□□□□ -0.44
LSM2-214ENST00000493387 SYN2Q92777 582 aaPredicted RBP12.3□□□□□ -0.44
LSM2-214ENST00000493387 KLHL5Q96PQ7 755 aa12.3□□□□□ -0.44
LSM2-214ENST00000493387 CDCA3Q99618 268 aaPredicted RBP12.3□□□□□ -0.44
LSM2-214ENST00000493387 CLSTN3Q9BQT9 956 aa12.3□□□□□ -0.44
LSM2-214ENST00000493387 ELOVL4Q9GZR5 314 aa12.3□□□□□ -0.44
LSM2-214ENST00000493387 TTYH1Q9H313 450 aaPredicted RBP12.3□□□□□ -0.44
LSM2-214ENST00000493387 IMPACTQ9P2X3 320 aa12.3□□□□□ -0.44
LSM2-214ENST00000493387 DPP7Q9UHL4 492 aa12.3□□□□□ -0.44
LSM2-214ENST00000493387 CDY1Q9Y6F8 540 aa12.3□□□□□ -0.44
LSM2-214ENST00000493387 TEX28O15482 410 aa12.29□□□□□ -0.44
LSM2-214ENST00000493387 MED7O43513 233 aa12.29□□□□□ -0.44
LSM2-214ENST00000493387 GYPCP04921 128 aa12.29□□□□□ -0.44
LSM2-214ENST00000493387 CNPP09543 421 aaKnown RBP12.29□□□□□ -0.44
LSM2-214ENST00000493387 CPB1P15086 417 aa12.29□□□□□ -0.44
LSM2-214ENST00000493387 POU3F3P20264 500 aaPredicted RBP12.29□□□□□ -0.44
LSM2-214ENST00000493387 ACAT1P24752 427 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms