RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 MTMR11A4FU01 709 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 KRT37O76014 449 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 PRPF6O94906 941 aaKnown RBP11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 LETM1O95202 739 aaPredicted RBP11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 PAX3P23760 479 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 CASP1P29466 404 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 LILRA4P59901 499 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 PFKPQ01813 784 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 KCNA1Q09470 495 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 DUSP4Q13115 394 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 FZD5Q13467 585 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 CAMK4Q16566 473 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 KNOP1Q1ED39 458 aaKnown RBP11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 C9orf57Q5W0N0 161 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 SCARA3Q6AZY7 606 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 OVOS1Q6IE37 1185 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 GPIHBP1Q8IV16 184 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 EFCAB13Q8IY85 973 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 ZNF687Q8N1G0 1237 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 TRIML1Q8N9V2 468 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 ATAD1Q8NBU5 361 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 ZSWIM2Q8NEG5 633 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 SENP8Q96LD8 212 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 FGFBP2Q9BYJ0 223 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 NUP62CLQ9H1M0 184 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 KIAA1586Q9HCI6 787 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 ASAH2Q9NR71 780 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 SPATA6Q9NWH7 488 aaPredicted RBP11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 DLL3Q9NYJ7 618 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 KIAA1468Q9P260 1216 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 MAFFQ9ULX9 164 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 SLC27A5Q9Y2P5 690 aa11.89□□□□□ -0.51
TMEM39A-211ENST00000491685 ZNF638Q14966 1978 aaKnown RBP11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 UBE4BO95155 1302 aa11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 A0A1W2PRU2 124 aa11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 ANO9A1A5B4 782 aa11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 OR6C75A6NL08 312 aa11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 PIRO00625 290 aa11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 ZNF197O14709 1029 aa11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 CALUO43852 315 aaPredicted RBP11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 KLRC4O43908 158 aa11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 PPP1R37O75864 691 aa11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 MICAL2O94851 1124 aa11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 TYMPP19971 482 aa11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 RPL13P26373 211 aaKnown RBP11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 ADSSP30520 456 aa11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 POU5F1Q01860 360 aaKnown RBP11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 GPR17Q13304 367 aa11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 TMEM132DQ14C87 1099 aa11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 CYP4A22Q5TCH4 519 aa11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 ZNF658Q5TYW1 1059 aaPredicted RBP11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 IQCEQ6IPM2 695 aa11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 CENPPQ6IPU0 288 aa11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 TSSK4Q6SA08 328 aa11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 CRELD2Q6UXH1 353 aaPredicted RBP11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 ELMOD1Q8N336 334 aa11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 ZSCAN18Q8TBC5 510 aaPredicted RBP11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 POMGNT1Q8WZA1 660 aa11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 DNASE1L2Q92874 299 aa11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 SMARCD2Q92925 531 aa11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 ZNF512Q96ME7 567 aaPredicted RBP11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 MKNK1Q9BUB5 465 aa11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 STRA6Q9BX79 667 aa11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 BCO2Q9BYV7 579 aa11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 CLSTN2Q9H4D0 955 aa11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 ZFP14Q9HCL3 533 aa11.88□□□□□ -0.51
TMEM39A-211ENST00000491685 ZFHX4Q86UP3 3567 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 ARNTLO00327 626 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 PRR29P0C7W0 189 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 ODC1P11926 461 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 GARTP22102 1010 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 GDI1P31150 447 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 CASP5P51878 434 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 EHHADHQ08426 723 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 STK4Q13043 487 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 WDR44Q5JSH3 913 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 ARMCX5Q6P1M9 558 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 ZC3H14Q6PJT7 736 aaKnown RBP11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 SASS6Q6UVJ0 657 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 USP37Q86T82 979 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 CD302Q8IX05 232 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 DCLK2Q8N568 766 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 SUMF1Q8NBK3 374 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 SPATA20Q8TB22 786 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 CLDN23Q96B33 292 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 CNTNAP3BQ96NU0 1288 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 LRRC3BQ96PB8 259 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 TSG101Q99816 390 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 LPIN3Q9BQK8 851 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 TRMT61BQ9BVS5 477 aaKnown RBP11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 CNTNAP3Q9BZ76 1288 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 OSBPL6Q9BZF3 934 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 BRD9Q9H8M2 597 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 DACH1Q9UI36 760 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 AGO2Q9UKV8 859 aaKnown RBP11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 NDRG2Q9UN36 371 aaKnown RBP11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 STYXL1Q9Y6J8 313 aa11.87□□□□□ -0.51
TMEM39A-211ENST00000491685 KIAA1549LQ6ZVL6 1849 aa11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 GREB1Q4ZG55 1949 aa11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 F5P12259 2224 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms