RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 GTF2F1P35269 517 aaKnown RBP eCLIP11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 LHX1P48742 406 aa11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 ZNF75DP51815 510 aa11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 MFAP3P55082 362 aa11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 ROR1Q01973 937 aa11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 INCA1Q0VD86 236 aa11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 DRAP1Q14919 205 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 PTPROQ16827 1216 aa11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 INTS6LQ5JSJ4 861 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 ACOT1Q86TX2 421 aa11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 RBM23Q86U06 439 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 LRRTM3Q86VH5 581 aa11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 THEM5Q8N1Q8 247 aa11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 MICALL1Q8N3F8 863 aa11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 MRPL43Q8N983 215 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 MYLIPQ8WY64 445 aa11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 MRPL38Q96DV4 380 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 GUCD1Q96NT3 240 aa11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 PGLYRP2Q96PD5 576 aa11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 NAA15Q9BXJ9 866 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 GPR88Q9GZN0 384 aa11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 RXFP1Q9HBX9 757 aa11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 NGRNQ9NPE2 291 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 PLCB1Q9NQ66 1216 aa11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 CRTAC1Q9NQ79 661 aa11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 TMLHEQ9NVH6 421 aa11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 BARX2Q9UMQ3 279 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 STXBP5LQ9Y2K9 1186 aa11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 BACE2Q9Y5Z0 518 aa11.49□□□□□ -0.57
CACNA1C-227ENST00000491104 PTPRDP23468 1912 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 FSD2A1L4K1 749 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 WDR27A2RRH5 827 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 MYBPHLA2RUH7 354 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 OR6C75A6NL08 312 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 TPM3P06753 285 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 KRT5P13647 590 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 TRIM21P19474 475 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 USP8P40818 1118 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 RAD23BP54727 409 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 RBM10P98175 930 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 BMS1Q14692 1282 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 SLC39A12Q504Y0 691 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 TCEAL5Q5H9L2 206 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 MDH1BQ5I0G3 518 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 PDXDC1Q6P996 788 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 TMEM270Q6UE05 265 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 RNF19BQ6ZMZ0 732 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 TMC6Q7Z403 805 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 PALB2Q86YC2 1186 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 VSTM4Q8IW00 320 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 SLC4A11Q8NBS3 891 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 RBBP8NLQ8NC74 664 aaPredicted RBP11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 SPATA18Q8TC71 538 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 SHC3Q92529 594 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 MYLPFQ96A32 169 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 ZCWPW1Q9H0M4 648 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 GRPEL1Q9HAV7 217 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 ACP6Q9NPH0 428 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 FAM49BQ9NUQ9 324 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 STK39Q9UEW8 545 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 GTF3C4Q9UKN8 822 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 SSX2IPQ9Y2D8 614 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 IRAK3Q9Y616 596 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 MTCH2Q9Y6C9 303 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 MTCL1Q9Y4B5 1905 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 MYH10P35580 1976 aa11.48□□□□□ -0.57
CACNA1C-227ENST00000491104 LAMA2P24043 3122 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 FOXN3O00409 490 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 CLASP2O75122 1294 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 VNN2O95498 520 aa11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 FAM163BP0C2L3 166 aa11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 SPATA31D3P0C874 917 aa11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 CCDC130P13994 396 aa11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 EPCAMP16422 314 aa11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 PTPN1P18031 435 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 KLRC2P26717 231 aa11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 PCSK1P29120 753 aa11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 SSTR3P32745 418 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 NRIP1P48552 1158 aa11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 NDUFV1P49821 464 aa11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 YWHAEP62258 255 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 TSPY1Q01534 308 aa11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 GOLGA8FQ08AF8 430 aa11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 GOLGA8DPQ0D2H9 430 aa11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 SLC8B1Q6J4K2 584 aa11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 PDE12Q6L8Q7 609 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 LLGL2Q6P1M3 1020 aa11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 SPATA31D4Q6ZUB0 917 aa11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 UNC93AQ86WB7 457 aa11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 DEFB123Q8N688 67 aa11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 B3GALNT2Q8NCR0 500 aa11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 CPLX3Q8WVH0 158 aa11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 FAXDC2Q96IV6 333 aa11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 GAS2L1Q99501 681 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 CDX2Q99626 313 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 PKMYT1Q99640 499 aa11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 ACBD6Q9BR61 282 aa11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 NT5C1AQ9BXI3 368 aa11.47□□□□□ -0.57
CACNA1C-227ENST00000491104 EMILIN2Q9BXX0 1053 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms