RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 FRMD5Q7Z6J6 570 aa12.75□□□□□ -0.37
SRSF4-204ENST00000489898 C12orf56Q8IXR9 622 aa12.75□□□□□ -0.37
SRSF4-204ENST00000489898 GPD1LQ8N335 351 aa12.75□□□□□ -0.37
SRSF4-204ENST00000489898 NELL1Q92832 810 aa12.75□□□□□ -0.37
SRSF4-204ENST00000489898 CLDN23Q96B33 292 aa12.75□□□□□ -0.37
SRSF4-204ENST00000489898 PYM1Q9BRP8 204 aaKnown RBP12.75□□□□□ -0.37
SRSF4-204ENST00000489898 BLZF1Q9H2G9 400 aa12.75□□□□□ -0.37
SRSF4-204ENST00000489898 HEBP1Q9NRV9 189 aa12.75□□□□□ -0.37
SRSF4-204ENST00000489898 INTS13Q9NVM9 706 aa12.75□□□□□ -0.37
SRSF4-204ENST00000489898 HSPBP1Q9NZL4 362 aa12.75□□□□□ -0.37
SRSF4-204ENST00000489898 FBXL21Q9UKT6 434 aa12.75□□□□□ -0.37
SRSF4-204ENST00000489898 CYB561D2O14569 222 aa12.74□□□□□ -0.37
SRSF4-204ENST00000489898 POLR2DO15514 142 aaKnown RBP12.74□□□□□ -0.37
SRSF4-204ENST00000489898 HAPLN1P10915 354 aaPredicted RBP12.74□□□□□ -0.37
SRSF4-204ENST00000489898 PAX3P23760 479 aa12.74□□□□□ -0.37
SRSF4-204ENST00000489898 PRKCQQ04759 706 aa12.74□□□□□ -0.37
SRSF4-204ENST00000489898 GAS6Q14393 721 aa12.74□□□□□ -0.37
SRSF4-204ENST00000489898 POSTNQ15063 836 aa12.74□□□□□ -0.37
SRSF4-204ENST00000489898 SOWAHAQ2M3V2 549 aa12.74□□□□□ -0.37
SRSF4-204ENST00000489898 HSCBQ8IWL3 235 aa12.74□□□□□ -0.37
SRSF4-204ENST00000489898 CCDC65Q8IXS2 484 aa12.74□□□□□ -0.37
SRSF4-204ENST00000489898 ZSCAN18Q8TBC5 510 aaPredicted RBP12.74□□□□□ -0.37
SRSF4-204ENST00000489898 KCNG4Q8TDN1 519 aa12.74□□□□□ -0.37
SRSF4-204ENST00000489898 TMEM174Q8WUU8 243 aa12.74□□□□□ -0.37
SRSF4-204ENST00000489898 ZNF516Q92618 1163 aa12.74□□□□□ -0.37
SRSF4-204ENST00000489898 DNASE1L2Q92874 299 aa12.74□□□□□ -0.37
SRSF4-204ENST00000489898 SMARCD2Q92925 531 aa12.74□□□□□ -0.37
SRSF4-204ENST00000489898 ZNF560Q96MR9 790 aa12.74□□□□□ -0.37
SRSF4-204ENST00000489898 ZNF396Q96N95 335 aaPredicted RBP12.74□□□□□ -0.37
SRSF4-204ENST00000489898 XYLT2Q9H1B5 865 aa12.74□□□□□ -0.37
SRSF4-204ENST00000489898 MFSD1Q9H3U5 465 aa12.74□□□□□ -0.37
SRSF4-204ENST00000489898 GOLPH3LQ9H4A5 285 aa12.74□□□□□ -0.37
SRSF4-204ENST00000489898 MAGEF1Q9HAY2 307 aa12.74□□□□□ -0.37
SRSF4-204ENST00000489898 TRPV5Q9NQA5 729 aa12.74□□□□□ -0.37
SRSF4-204ENST00000489898 ASAH2Q9NR71 780 aa12.74□□□□□ -0.37
SRSF4-204ENST00000489898 ITGA11Q9UKX5 1188 aa12.74□□□□□ -0.37
SRSF4-204ENST00000489898 PCDHB13Q9Y5F0 798 aa12.74□□□□□ -0.37
SRSF4-204ENST00000489898 KANSL1LA0AUZ9 987 aa12.73□□□□□ -0.37
SRSF4-204ENST00000489898 PRR29P0C7W0 189 aa12.73□□□□□ -0.37
SRSF4-204ENST00000489898 MYL4P12829 197 aa12.73□□□□□ -0.37
SRSF4-204ENST00000489898 PFKFB1P16118 471 aa12.73□□□□□ -0.37
SRSF4-204ENST00000489898 ACAT1P24752 427 aaKnown RBP12.73□□□□□ -0.37
SRSF4-204ENST00000489898 ASIC1P78348 528 aa12.73□□□□□ -0.37
SRSF4-204ENST00000489898 CYP4F8P98187 520 aa12.73□□□□□ -0.37
SRSF4-204ENST00000489898 TFAMQ00059 246 aaKnown RBP12.73□□□□□ -0.37
SRSF4-204ENST00000489898 SV2CQ496J9 727 aa12.73□□□□□ -0.37
SRSF4-204ENST00000489898 SLC44A4Q53GD3 710 aa12.73□□□□□ -0.37
SRSF4-204ENST00000489898 INTS6LQ5JSJ4 861 aaKnown RBP12.73□□□□□ -0.37
SRSF4-204ENST00000489898 C1orf220Q5T0J3 134 aa12.73□□□□□ -0.37
SRSF4-204ENST00000489898 ARMCX5Q6P1M9 558 aa12.73□□□□□ -0.37
SRSF4-204ENST00000489898 TXNDC11Q6PKC3 985 aa12.73□□□□□ -0.37
SRSF4-204ENST00000489898 DNAJB7Q7Z6W7 309 aaPredicted RBP12.73□□□□□ -0.37
SRSF4-204ENST00000489898 LEMD2Q8NC56 503 aa12.73□□□□□ -0.37
SRSF4-204ENST00000489898 KCTD10Q9H3F6 313 aa12.73□□□□□ -0.37
SRSF4-204ENST00000489898 CRTAC1Q9NQ79 661 aa12.73□□□□□ -0.37
SRSF4-204ENST00000489898 PRMT8Q9NR22 394 aaPredicted RBP12.73□□□□□ -0.37
SRSF4-204ENST00000489898 SERTAD1Q9UHV2 236 aa12.73□□□□□ -0.37
SRSF4-204ENST00000489898 AGAP1Q9UPQ3 857 aa12.73□□□□□ -0.37
SRSF4-204ENST00000489898 EXOC7Q9UPT5 735 aa12.73□□□□□ -0.37
SRSF4-204ENST00000489898 MUC22E2RYF6 1773 aaPredicted RBP12.72□□□□□ -0.37
SRSF4-204ENST00000489898 GFRA3O60609 400 aa12.72□□□□□ -0.37
SRSF4-204ENST00000489898 F11P03951 625 aa12.72□□□□□ -0.37
SRSF4-204ENST00000489898 WEE1P30291 646 aa12.72□□□□□ -0.37
SRSF4-204ENST00000489898 HOXC13P31276 330 aa12.72□□□□□ -0.37
SRSF4-204ENST00000489898 ELF1P32519 619 aa12.72□□□□□ -0.37
SRSF4-204ENST00000489898 CACNA2D1P54289 1103 aa12.72□□□□□ -0.37
SRSF4-204ENST00000489898 CLDN10P78369 228 aa12.72□□□□□ -0.37
SRSF4-204ENST00000489898 CYP24A1Q07973 514 aa12.72□□□□□ -0.37
SRSF4-204ENST00000489898 STK4Q13043 487 aa12.72□□□□□ -0.37
SRSF4-204ENST00000489898 PSMD6Q15008 389 aa12.72□□□□□ -0.37
SRSF4-204ENST00000489898 SNRNP35Q16560 246 aaKnown RBP12.72□□□□□ -0.37
SRSF4-204ENST00000489898 FAM171BQ6P995 826 aa12.72□□□□□ -0.37
SRSF4-204ENST00000489898 TPRG1Q6ZUI0 275 aa12.72□□□□□ -0.37
SRSF4-204ENST00000489898 USP37Q86T82 979 aa12.72□□□□□ -0.37
SRSF4-204ENST00000489898 IQUBQ8NA54 791 aa12.72□□□□□ -0.37
SRSF4-204ENST00000489898 SPRYD3Q8NCJ5 442 aa12.72□□□□□ -0.37
SRSF4-204ENST00000489898 ATOH1Q92858 354 aaPredicted RBP12.72□□□□□ -0.37
SRSF4-204ENST00000489898 OSBPL6Q9BZF3 934 aa12.72□□□□□ -0.37
SRSF4-204ENST00000489898 TMEM206Q9H813 350 aa12.72□□□□□ -0.37
SRSF4-204ENST00000489898 DMAC2Q9NW81 257 aa12.72□□□□□ -0.37
SRSF4-204ENST00000489898 C2orf42Q9NWW7 574 aa12.72□□□□□ -0.37
SRSF4-204ENST00000489898 DSEQ9UL01 958 aa12.72□□□□□ -0.37
SRSF4-204ENST00000489898 CCL26Q9Y258 94 aa12.72□□□□□ -0.37
SRSF4-204ENST00000489898 ASPMQ8IZT6 3477 aa12.72□□□□□ -0.37
SRSF4-204ENST00000489898 NYNRINQ9P2P1 1898 aaKnown RBP12.72□□□□□ -0.37
SRSF4-204ENST00000489898 RALGAPA1Q6GYQ0 2036 aa12.71□□□□□ -0.37
SRSF4-204ENST00000489898 MYBPHLA2RUH7 354 aa12.71□□□□□ -0.37
SRSF4-204ENST00000489898 OTOL1A6NHN0 477 aaPredicted RBP12.71□□□□□ -0.37
SRSF4-204ENST00000489898 HEPACAM2A8MVW5 462 aa12.71□□□□□ -0.37
SRSF4-204ENST00000489898 ZNF197O14709 1029 aa12.71□□□□□ -0.37
SRSF4-204ENST00000489898 KIAA0391O15091 583 aaKnown RBP12.71□□□□□ -0.37
SRSF4-204ENST00000489898 ATP2C2O75185 946 aa12.71□□□□□ -0.37
SRSF4-204ENST00000489898 NOL4O94818 638 aa12.71□□□□□ -0.37
SRSF4-204ENST00000489898 LDHAP00338 332 aaKnown RBP12.71□□□□□ -0.37
SRSF4-204ENST00000489898 CST3P01034 146 aaPredicted RBP12.71□□□□□ -0.37
SRSF4-204ENST00000489898 CHRM1P11229 460 aaPredicted RBP12.71□□□□□ -0.37
SRSF4-204ENST00000489898 GABRR2P28476 465 aa12.71□□□□□ -0.37
SRSF4-204ENST00000489898 PNPLA4P41247 253 aa12.71□□□□□ -0.37
SRSF4-204ENST00000489898 CASP4P49662 377 aa12.71□□□□□ -0.37
SRSF4-204ENST00000489898 PLD1Q13393 1074 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms