RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 SPATA18Q8TC71 538 aa14.35□□□□□ -0.11
CCL28-202ENST00000489442 SPPL2BQ8TCT7 592 aa14.35□□□□□ -0.11
CCL28-202ENST00000489442 PLEKHO2Q8TD55 490 aa14.35□□□□□ -0.11
CCL28-202ENST00000489442 ING5Q8WYH8 240 aa14.35□□□□□ -0.11
CCL28-202ENST00000489442 FGF13Q92913 245 aa14.35□□□□□ -0.11
CCL28-202ENST00000489442 SNX25Q9H3E2 840 aa14.35□□□□□ -0.11
CCL28-202ENST00000489442 ASAH2Q9NR71 780 aa14.35□□□□□ -0.11
CCL28-202ENST00000489442 HSFX1Q9UBD0 423 aa14.35□□□□□ -0.11
CCL28-202ENST00000489442 NXF1Q9UBU9 619 aaKnown RBP14.35□□□□□ -0.11
CCL28-202ENST00000489442 PCDHB5Q9Y5E4 795 aa14.35□□□□□ -0.11
CCL28-202ENST00000489442 PSMA7O14818 248 aa14.34□□□□□ -0.11
CCL28-202ENST00000489442 IKBKBO14920 756 aa14.34□□□□□ -0.11
CCL28-202ENST00000489442 AKAP3O75969 853 aa14.34□□□□□ -0.11
CCL28-202ENST00000489442 VNN2O95498 520 aa14.34□□□□□ -0.11
CCL28-202ENST00000489442 EPB41P11171 864 aaKnown RBP14.34□□□□□ -0.11
CCL28-202ENST00000489442 MYL4P12829 197 aa14.34□□□□□ -0.11
CCL28-202ENST00000489442 CLDN10P78369 228 aa14.34□□□□□ -0.11
CCL28-202ENST00000489442 SIGLEC14Q08ET2 396 aa14.34□□□□□ -0.11
CCL28-202ENST00000489442 TDGQ13569 410 aa14.34□□□□□ -0.11
CCL28-202ENST00000489442 NCOA4Q13772 614 aa14.34□□□□□ -0.11
CCL28-202ENST00000489442 VEPH1Q14D04 833 aa14.34□□□□□ -0.11
CCL28-202ENST00000489442 ZNF699Q32M78 642 aa14.34□□□□□ -0.11
CCL28-202ENST00000489442 COBLL1Q53SF7 1204 aa14.34□□□□□ -0.11
CCL28-202ENST00000489442 TDRD10Q5VZ19 366 aaKnown RBP14.34□□□□□ -0.11
CCL28-202ENST00000489442 TRIM67Q6ZTA4 783 aa14.34□□□□□ -0.11
CCL28-202ENST00000489442 ITIH5Q86UX2 942 aa14.34□□□□□ -0.11
CCL28-202ENST00000489442 LRRTM3Q86VH5 581 aa14.34□□□□□ -0.11
CCL28-202ENST00000489442 LEMD2Q8NC56 503 aa14.34□□□□□ -0.11
CCL28-202ENST00000489442 NXPE3Q969Y0 559 aa14.34□□□□□ -0.11
CCL28-202ENST00000489442 EEF2KMTQ96G04 330 aa14.34□□□□□ -0.11
CCL28-202ENST00000489442 LRFN3Q9BTN0 628 aa14.34□□□□□ -0.11
CCL28-202ENST00000489442 GZF1Q9H116 711 aaPredicted RBP14.34□□□□□ -0.11
CCL28-202ENST00000489442 CRISPLD1Q9H336 500 aa14.34□□□□□ -0.11
CCL28-202ENST00000489442 CEP72Q9P209 647 aa14.34□□□□□ -0.11
CCL28-202ENST00000489442 MAN1B1Q9UKM7 699 aa14.34□□□□□ -0.11
CCL28-202ENST00000489442 GTF3C4Q9UKN8 822 aa14.34□□□□□ -0.11
CCL28-202ENST00000489442 ASB3Q9Y575 518 aa14.34□□□□□ -0.11
CCL28-202ENST00000489442 ZDBF2Q9HCK1 2354 aa14.34□□□□□ -0.11
CCL28-202ENST00000489442 PRR33A8MZF0 331 aa14.33□□□□□ -0.12
CCL28-202ENST00000489442 BIN1O00499 593 aa14.33□□□□□ -0.12
CCL28-202ENST00000489442 SOAT2O75908 522 aa14.33□□□□□ -0.12
CCL28-202ENST00000489442 C4BPAP04003 597 aaKnown RBP14.33□□□□□ -0.12
CCL28-202ENST00000489442 PDGFRBP09619 1106 aa14.33□□□□□ -0.12
CCL28-202ENST00000489442 P4HA1P13674 534 aa14.33□□□□□ -0.12
CCL28-202ENST00000489442 GNL1P36915 607 aaPredicted RBP14.33□□□□□ -0.12
CCL28-202ENST00000489442 PPP1R2P41236 205 aa14.33□□□□□ -0.12
CCL28-202ENST00000489442 FKBP3Q00688 224 aaKnown RBP14.33□□□□□ -0.12
CCL28-202ENST00000489442 ZCWPW2Q504Y3 356 aa14.33□□□□□ -0.12
CCL28-202ENST00000489442 ZNF667Q5HYK9 610 aa14.33□□□□□ -0.12
CCL28-202ENST00000489442 INTS6LQ5JSJ4 861 aaKnown RBP14.33□□□□□ -0.12
CCL28-202ENST00000489442 MTSS1LQ765P7 747 aa14.33□□□□□ -0.12
CCL28-202ENST00000489442 OSTM1Q86WC4 334 aa14.33□□□□□ -0.12
CCL28-202ENST00000489442 HS6ST3Q8IZP7 471 aa14.33□□□□□ -0.12
CCL28-202ENST00000489442 ADSSL1Q8N142 457 aa14.33□□□□□ -0.12
CCL28-202ENST00000489442 TTC9BQ8N6N2 239 aa14.33□□□□□ -0.12
CCL28-202ENST00000489442 OR6B3Q8NGW1 331 aa14.33□□□□□ -0.12
CCL28-202ENST00000489442 RSAD2Q8WXG1 361 aa14.33□□□□□ -0.12
CCL28-202ENST00000489442 MCRS1Q96EZ8 462 aa14.33□□□□□ -0.12
CCL28-202ENST00000489442 PI4K2AQ9BTU6 479 aa14.33□□□□□ -0.12
CCL28-202ENST00000489442 MMRN2Q9H8L6 949 aa14.33□□□□□ -0.12
CCL28-202ENST00000489442 AVENQ9NQS1 362 aaPredicted RBP14.33□□□□□ -0.12
CCL28-202ENST00000489442 TMEM221A6NGB7 291 aa14.32□□□□□ -0.12
CCL28-202ENST00000489442 M0R296 226 aa14.32□□□□□ -0.12
CCL28-202ENST00000489442 GABRDO14764 452 aa14.32□□□□□ -0.12
CCL28-202ENST00000489442 STAU1O95793 577 aaKnown RBP14.32□□□□□ -0.12
CCL28-202ENST00000489442 TRIM49P0CI25 452 aa14.32□□□□□ -0.12
CCL28-202ENST00000489442 TRIM49CP0CI26 452 aa14.32□□□□□ -0.12
CCL28-202ENST00000489442 WARSP23381 471 aaKnown RBP14.32□□□□□ -0.12
CCL28-202ENST00000489442 PIK3CAP42336 1068 aa14.32□□□□□ -0.12
CCL28-202ENST00000489442 GCLMP48507 274 aa14.32□□□□□ -0.12
CCL28-202ENST00000489442 LRRC63Q05C16 580 aa14.32□□□□□ -0.12
CCL28-202ENST00000489442 MAPRE1Q15691 268 aaKnown RBP14.32□□□□□ -0.12
CCL28-202ENST00000489442 CAMK4Q16566 473 aa14.32□□□□□ -0.12
CCL28-202ENST00000489442 SLC5A9Q2M3M2 681 aa14.32□□□□□ -0.12
CCL28-202ENST00000489442 SGSM1Q2NKQ1 1148 aa14.32□□□□□ -0.12
CCL28-202ENST00000489442 ZACNQ401N2 412 aa14.32□□□□□ -0.12
CCL28-202ENST00000489442 ANKRD40Q6AI12 368 aa14.32□□□□□ -0.12
CCL28-202ENST00000489442 KLHL10Q6JEL2 608 aa14.32□□□□□ -0.12
CCL28-202ENST00000489442 SV2AQ7L0J3 742 aa14.32□□□□□ -0.12
CCL28-202ENST00000489442 DNAJB7Q7Z6W7 309 aaPredicted RBP14.32□□□□□ -0.12
CCL28-202ENST00000489442 SPATA2LQ8IUW3 424 aaPredicted RBP14.32□□□□□ -0.12
CCL28-202ENST00000489442 NPAS3Q8IXF0 933 aa14.32□□□□□ -0.12
CCL28-202ENST00000489442 ST13P5Q8NFI4 369 aaPredicted RBP14.32□□□□□ -0.12
CCL28-202ENST00000489442 TCEAL4Q96EI5 215 aa14.32□□□□□ -0.12
CCL28-202ENST00000489442 DHTKD1Q96HY7 919 aaPredicted RBP14.32□□□□□ -0.12
CCL28-202ENST00000489442 SYT15Q9BQS2 421 aa14.32□□□□□ -0.12
CCL28-202ENST00000489442 MKNK1Q9BUB5 465 aa14.32□□□□□ -0.12
CCL28-202ENST00000489442 IMPG2Q9BZV3 1241 aa14.32□□□□□ -0.12
CCL28-202ENST00000489442 SLITRK6Q9H5Y7 841 aa14.32□□□□□ -0.12
CCL28-202ENST00000489442 C11orf16Q9NQ32 467 aa14.32□□□□□ -0.12
CCL28-202ENST00000489442 TMLHEQ9NVH6 421 aa14.32□□□□□ -0.12
CCL28-202ENST00000489442 GDE1Q9NZC3 331 aa14.32□□□□□ -0.12
CCL28-202ENST00000489442 CDH9Q9ULB4 789 aa14.32□□□□□ -0.12
CCL28-202ENST00000489442 MYH10P35580 1976 aa14.31□□□□□ -0.12
CCL28-202ENST00000489442 STX10O60499 249 aa14.31□□□□□ -0.12
CCL28-202ENST00000489442 TACC1O75410 805 aa14.31□□□□□ -0.12
CCL28-202ENST00000489442 VNN1O95497 513 aa14.31□□□□□ -0.12
CCL28-202ENST00000489442 FAM163BP0C2L3 166 aa14.31□□□□□ -0.12
CCL28-202ENST00000489442 HAPLN1P10915 354 aaPredicted RBP14.31□□□□□ -0.12
CCL28-202ENST00000489442 CEBPBP17676 345 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms