RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 FAM163BP0C2L3 166 aa15.31■□□□□ 0.04
BRCA1-218ENST00000489037 MYL4P12829 197 aa15.31■□□□□ 0.04
BRCA1-218ENST00000489037 PRCPP42785 496 aa15.31■□□□□ 0.04
BRCA1-218ENST00000489037 VAMP7P51809 220 aa15.31■□□□□ 0.04
BRCA1-218ENST00000489037 SOWAHAQ2M3V2 549 aa15.31■□□□□ 0.04
BRCA1-218ENST00000489037 WDR72Q3MJ13 1102 aa15.31■□□□□ 0.04
BRCA1-218ENST00000489037 FAM186BQ8IYM0 893 aa15.31■□□□□ 0.04
BRCA1-218ENST00000489037 SPATA20Q8TB22 786 aa15.31■□□□□ 0.04
BRCA1-218ENST00000489037 ITFG1Q8TB96 612 aa15.31■□□□□ 0.04
BRCA1-218ENST00000489037 ZNF516Q92618 1163 aa15.31■□□□□ 0.04
BRCA1-218ENST00000489037 RTP3Q9BQQ7 232 aa15.31■□□□□ 0.04
BRCA1-218ENST00000489037 ABI2Q9NYB9 513 aaPredicted RBP15.31■□□□□ 0.04
BRCA1-218ENST00000489037 PSMA7O14818 248 aa15.3■□□□□ 0.04
BRCA1-218ENST00000489037 MICAL2O94851 1124 aa15.3■□□□□ 0.04
BRCA1-218ENST00000489037 FGF19O95750 216 aa15.3■□□□□ 0.04
BRCA1-218ENST00000489037 STAU1O95793 577 aaKnown RBP15.3■□□□□ 0.04
BRCA1-218ENST00000489037 EPB41P11171 864 aaKnown RBP15.3■□□□□ 0.04
BRCA1-218ENST00000489037 P4HA1P13674 534 aa15.3■□□□□ 0.04
BRCA1-218ENST00000489037 ACAT1P24752 427 aaKnown RBP15.3■□□□□ 0.04
BRCA1-218ENST00000489037 MYL6P60660 151 aa15.3■□□□□ 0.04
BRCA1-218ENST00000489037 CLDN10P78369 228 aa15.3■□□□□ 0.04
BRCA1-218ENST00000489037 NCOA4Q13772 614 aa15.3■□□□□ 0.04
BRCA1-218ENST00000489037 MAPRE1Q15691 268 aaKnown RBP15.3■□□□□ 0.04
BRCA1-218ENST00000489037 ZNF699Q32M78 642 aa15.3■□□□□ 0.04
BRCA1-218ENST00000489037 COBLL1Q53SF7 1204 aa15.3■□□□□ 0.04
BRCA1-218ENST00000489037 ZNF667Q5HYK9 610 aa15.3■□□□□ 0.04
BRCA1-218ENST00000489037 INTS6LQ5JSJ4 861 aaKnown RBP15.3■□□□□ 0.04
BRCA1-218ENST00000489037 LRRTM3Q86VH5 581 aa15.3■□□□□ 0.04
BRCA1-218ENST00000489037 ING5Q8WYH8 240 aa15.3■□□□□ 0.04
BRCA1-218ENST00000489037 ERCC4Q92889 916 aaPredicted RBP15.3■□□□□ 0.04
BRCA1-218ENST00000489037 PBXIP1Q96AQ6 731 aa15.3■□□□□ 0.04
BRCA1-218ENST00000489037 GDE1Q9NZC3 331 aa15.3■□□□□ 0.04
BRCA1-218ENST00000489037 CEP72Q9P209 647 aa15.3■□□□□ 0.04
BRCA1-218ENST00000489037 NXF1Q9UBU9 619 aaKnown RBP15.3■□□□□ 0.04
BRCA1-218ENST00000489037 CDH9Q9ULB4 789 aa15.3■□□□□ 0.04
BRCA1-218ENST00000489037 GABRDO14764 452 aa15.29■□□□□ 0.04
BRCA1-218ENST00000489037 STX10O60499 249 aa15.29■□□□□ 0.04
BRCA1-218ENST00000489037 AKAP3O75969 853 aa15.29■□□□□ 0.04
BRCA1-218ENST00000489037 VNN2O95498 520 aa15.29■□□□□ 0.04
BRCA1-218ENST00000489037 C4BPAP04003 597 aaKnown RBP15.29■□□□□ 0.04
BRCA1-218ENST00000489037 HAPLN1P10915 354 aaPredicted RBP15.29■□□□□ 0.04
BRCA1-218ENST00000489037 WARSP23381 471 aaKnown RBP15.29■□□□□ 0.04
BRCA1-218ENST00000489037 GNL1P36915 607 aaPredicted RBP15.29■□□□□ 0.04
BRCA1-218ENST00000489037 RPL10AP62906 217 aaKnown RBP15.29■□□□□ 0.04
BRCA1-218ENST00000489037 ENPEPQ07075 957 aa15.29■□□□□ 0.04
BRCA1-218ENST00000489037 SGSM1Q2NKQ1 1148 aa15.29■□□□□ 0.04
BRCA1-218ENST00000489037 TDRD10Q5VZ19 366 aaKnown RBP15.29■□□□□ 0.04
BRCA1-218ENST00000489037 SCARA3Q6AZY7 606 aa15.29■□□□□ 0.04
BRCA1-218ENST00000489037 C4orf50Q6ZRC1 276 aa15.29■□□□□ 0.04
BRCA1-218ENST00000489037 SPATA2LQ8IUW3 424 aaPredicted RBP15.29■□□□□ 0.04
BRCA1-218ENST00000489037 NPAS3Q8IXF0 933 aa15.29■□□□□ 0.04
BRCA1-218ENST00000489037 HS6ST3Q8IZP7 471 aa15.29■□□□□ 0.04
BRCA1-218ENST00000489037 CCDC150Q8NCX0 1101 aa15.29■□□□□ 0.04
BRCA1-218ENST00000489037 OR6B3Q8NGW1 331 aa15.29■□□□□ 0.04
BRCA1-218ENST00000489037 PLEKHO2Q8TD55 490 aa15.29■□□□□ 0.04
BRCA1-218ENST00000489037 MCRS1Q96EZ8 462 aa15.29■□□□□ 0.04
BRCA1-218ENST00000489037 MKNK1Q9BUB5 465 aa15.29■□□□□ 0.04
BRCA1-218ENST00000489037 IMPG2Q9BZV3 1241 aa15.29■□□□□ 0.04
BRCA1-218ENST00000489037 GPR88Q9GZN0 384 aa15.29■□□□□ 0.04
BRCA1-218ENST00000489037 CRISPLD1Q9H336 500 aa15.29■□□□□ 0.04
BRCA1-218ENST00000489037 C11orf16Q9NQ32 467 aa15.29■□□□□ 0.04
BRCA1-218ENST00000489037 GTF3C4Q9UKN8 822 aa15.29■□□□□ 0.04
BRCA1-218ENST00000489037 FBXL21Q9UKT6 434 aa15.29■□□□□ 0.04
BRCA1-218ENST00000489037 ZNF638Q14966 1978 aaKnown RBP15.29■□□□□ 0.04
BRCA1-218ENST00000489037 MYH10P35580 1976 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 ANHXE9PGG2 379 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 TACC1O75410 805 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 PDGFRBP09619 1106 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 TRIM21P19474 475 aaKnown RBP15.28■□□□□ 0.04
BRCA1-218ENST00000489037 PIK3CAP42336 1068 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 DLG4P78352 724 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 FKBP3Q00688 224 aaKnown RBP15.28■□□□□ 0.04
BRCA1-218ENST00000489037 LRRC63Q05C16 580 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 HTR4Q13639 388 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 SLC5A9Q2M3M2 681 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 ZACNQ401N2 412 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 ZCWPW2Q504Y3 356 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 PRSS36Q5K4E3 855 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 ISM2Q6H9L7 571 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 SV2AQ7L0J3 742 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 BMP8AQ7Z5Y6 402 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 DNAJB7Q7Z6W7 309 aaPredicted RBP15.28■□□□□ 0.04
BRCA1-218ENST00000489037 OSTM1Q86WC4 334 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 SUGP1Q8IWZ8 645 aaKnown RBP15.28■□□□□ 0.04
BRCA1-218ENST00000489037 ADSSL1Q8N142 457 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 SLC44A3Q8N4M1 653 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 TTC9BQ8N6N2 239 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 RSAD2Q8WXG1 361 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 TAF4BQ92750 862 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 PSMG2Q969U7 264 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 DHTKD1Q96HY7 919 aaPredicted RBP15.28■□□□□ 0.04
BRCA1-218ENST00000489037 GCNAQ96QF7 691 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 SYT15Q9BQS2 421 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 PI4K2AQ9BTU6 479 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 GZF1Q9H116 711 aaPredicted RBP15.28■□□□□ 0.04
BRCA1-218ENST00000489037 ABCB6Q9NP58 842 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 MAGEC2Q9UBF1 373 aaPredicted RBP15.28■□□□□ 0.04
BRCA1-218ENST00000489037 MAN1B1Q9UKM7 699 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 DUSP12Q9UNI6 340 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 HCN4Q9Y3Q4 1203 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms