RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, human

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD46-215	ENST00000488596	HLTF	Q14527	1009 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
CD46-215	ENST00000488596	SAFB	Q15424	915 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
CD46-215	ENST00000488596	ATP2B3	Q16720	1220 aa		4.07	□□□□□ -1.76
CD46-215	ENST00000488596	CCDC93	Q567U6	631 aa		4.07	□□□□□ -1.76
CD46-215	ENST00000488596	KHDC1L	Q5JSQ8	128 aa		4.07	□□□□□ -1.76
CD46-215	ENST00000488596	EPHA10	Q5JZY3	1008 aa		4.07	□□□□□ -1.76
CD46-215	ENST00000488596	SYCP2L	Q5T4T6	812 aa		4.07	□□□□□ -1.76
CD46-215	ENST00000488596	UTP14C	Q5TAP6	766 aa	Known RBP	4.07	□□□□□ -1.76
CD46-215	ENST00000488596	KRTAP5-11	Q6L8G4	156 aa		4.07	□□□□□ -1.76
CD46-215	ENST00000488596	DARS2	Q6PI48	645 aa	Known RBP	4.07	□□□□□ -1.76
CD46-215	ENST00000488596	SRRM1	Q8IYB3	904 aa	Known RBP	4.07	□□□□□ -1.76
CD46-215	ENST00000488596	FAM43A	Q8N2R8	423 aa		4.07	□□□□□ -1.76
CD46-215	ENST00000488596	PJA1	Q8NG27	643 aa		4.07	□□□□□ -1.76
CD46-215	ENST00000488596	FUBP1	Q96AE4	644 aa	Known RBP	4.07	□□□□□ -1.76
CD46-215	ENST00000488596	TTC17	Q96AE7	1141 aa		4.07	□□□□□ -1.76
CD46-215	ENST00000488596	FAM167A	Q96KS9	214 aa		4.07	□□□□□ -1.76
CD46-215	ENST00000488596	WDCP	Q9H6R7	721 aa		4.07	□□□□□ -1.76
CD46-215	ENST00000488596	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.07	□□□□□ -1.76
CD46-215	ENST00000488596		A0A1B0GTW7	788 aa		4.06	□□□□□ -1.76
CD46-215	ENST00000488596	CDHR4	A6H8M9	788 aa		4.06	□□□□□ -1.76
CD46-215	ENST00000488596	PQBP1	O60828	265 aa	Known RBP	4.06	□□□□□ -1.76
CD46-215	ENST00000488596	SLC43A1	O75387	559 aa		4.06	□□□□□ -1.76
CD46-215	ENST00000488596	AGFG2	O95081	481 aa		4.06	□□□□□ -1.76
CD46-215	ENST00000488596	HRG	P04196	525 aa		4.06	□□□□□ -1.76
CD46-215	ENST00000488596	MYL3	P08590	195 aa		4.06	□□□□□ -1.76
CD46-215	ENST00000488596	NEK3	P51956	506 aa		4.06	□□□□□ -1.76
CD46-215	ENST00000488596	PSMC1	P62191	440 aa	Known RBP	4.06	□□□□□ -1.76
CD46-215	ENST00000488596	GPSM2	P81274	684 aa		4.06	□□□□□ -1.76
CD46-215	ENST00000488596	SEMA5A	Q13591	1074 aa		4.06	□□□□□ -1.76
CD46-215	ENST00000488596	SPDYE7P	Q495Y7	208 aa		4.06	□□□□□ -1.76
CD46-215	ENST00000488596	CCSAP	Q6IQ19	270 aa	Predicted RBP	4.06	□□□□□ -1.76
CD46-215	ENST00000488596	APOA5	Q6Q788	366 aa		4.06	□□□□□ -1.76
CD46-215	ENST00000488596	PCSK9	Q8NBP7	692 aa	Known RBP	4.06	□□□□□ -1.76
CD46-215	ENST00000488596	IL31RA	Q8NI17	732 aa		4.06	□□□□□ -1.76
CD46-215	ENST00000488596	TBC1D15	Q8TC07	691 aa		4.06	□□□□□ -1.76
CD46-215	ENST00000488596	PARD3B	Q8TEW8	1205 aa		4.06	□□□□□ -1.76
CD46-215	ENST00000488596	ANKS1A	Q92625	1134 aa		4.06	□□□□□ -1.76
CD46-215	ENST00000488596	NACC2	Q96BF6	587 aa		4.06	□□□□□ -1.76
CD46-215	ENST00000488596	PACSIN1	Q9BY11	444 aa		4.06	□□□□□ -1.76
CD46-215	ENST00000488596	C22orf23	Q9BZE7	217 aa		4.06	□□□□□ -1.76
CD46-215	ENST00000488596	BRD9	Q9H8M2	597 aa		4.06	□□□□□ -1.76
CD46-215	ENST00000488596	SARS2	Q9NP81	518 aa	Known RBP	4.06	□□□□□ -1.76
CD46-215	ENST00000488596	TMEM74B	Q9NUR3	256 aa		4.06	□□□□□ -1.76
CD46-215	ENST00000488596	USP25	Q9UHP3	1055 aa		4.06	□□□□□ -1.76
CD46-215	ENST00000488596	TPCN1	Q9ULQ1	816 aa		4.06	□□□□□ -1.76
CD46-215	ENST00000488596	NOX1	Q9Y5S8	564 aa		4.06	□□□□□ -1.76
CD46-215	ENST00000488596	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
CD46-215	ENST00000488596	AATK	Q6ZMQ8	1374 aa		4.05	□□□□□ -1.76
CD46-215	ENST00000488596		A0A1W2PPL8	197 aa		4.05	□□□□□ -1.76
CD46-215	ENST00000488596	GOLIM4	O00461	696 aa		4.05	□□□□□ -1.76
CD46-215	ENST00000488596	PMM2	O15305	246 aa		4.05	□□□□□ -1.76
CD46-215	ENST00000488596	PHGDH	O43175	533 aa	Known RBP	4.05	□□□□□ -1.76
CD46-215	ENST00000488596	GJB1	P08034	283 aa		4.05	□□□□□ -1.76
CD46-215	ENST00000488596	NBPF7	P0C2Y1	421 aa	Predicted RBP	4.05	□□□□□ -1.76
CD46-215	ENST00000488596	FTH1P19	P0C7X4	201 aa		4.05	□□□□□ -1.76
CD46-215	ENST00000488596	NPR1	P16066	1061 aa		4.05	□□□□□ -1.76
CD46-215	ENST00000488596	PEX2	P28328	305 aa		4.05	□□□□□ -1.76
CD46-215	ENST00000488596	PIK3CG	P48736	1102 aa		4.05	□□□□□ -1.76
CD46-215	ENST00000488596	CACNB3	P54284	484 aa		4.05	□□□□□ -1.76
CD46-215	ENST00000488596	CACNA2D1	P54289	1103 aa		4.05	□□□□□ -1.76
CD46-215	ENST00000488596	SOX8	P57073	446 aa		4.05	□□□□□ -1.76
CD46-215	ENST00000488596	CXADR	P78310	365 aa		4.05	□□□□□ -1.76
CD46-215	ENST00000488596	FAM193A	P78312	1265 aa		4.05	□□□□□ -1.76
CD46-215	ENST00000488596	NOMO2	Q5JPE7	1267 aa		4.05	□□□□□ -1.76
CD46-215	ENST00000488596	FITM2	Q8N6M3	262 aa		4.05	□□□□□ -1.76
CD46-215	ENST00000488596	SLC17A8	Q8NDX2	589 aa		4.05	□□□□□ -1.76
CD46-215	ENST00000488596	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	4.05	□□□□□ -1.76
CD46-215	ENST00000488596	BRIX1	Q8TDN6	353 aa	Known RBP	4.05	□□□□□ -1.76
CD46-215	ENST00000488596	LRTOMT	Q8WZ04	291 aa		4.05	□□□□□ -1.76
CD46-215	ENST00000488596	MTFMT	Q96DP5	389 aa	Known RBP	4.05	□□□□□ -1.76
CD46-215	ENST00000488596	RNF31	Q96EP0	1072 aa		4.05	□□□□□ -1.76
CD46-215	ENST00000488596	BOD1	Q96IK1	185 aa		4.05	□□□□□ -1.76
CD46-215	ENST00000488596	PDLIM2	Q96JY6	352 aa		4.05	□□□□□ -1.76
CD46-215	ENST00000488596	MRGPRX1	Q96LB2	322 aa		4.05	□□□□□ -1.76
CD46-215	ENST00000488596	P2RX7	Q99572	595 aa	Known RBP	4.05	□□□□□ -1.76
CD46-215	ENST00000488596	NAA15	Q9BXJ9	866 aa	Known RBP	4.05	□□□□□ -1.76
CD46-215	ENST00000488596	KLK15	Q9H2R5	256 aa		4.05	□□□□□ -1.76
CD46-215	ENST00000488596	CASS4	Q9NQ75	786 aa		4.05	□□□□□ -1.76
CD46-215	ENST00000488596	SIDT1	Q9NXL6	827 aa	Known RBP	4.05	□□□□□ -1.76
CD46-215	ENST00000488596	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	4.05	□□□□□ -1.76
CD46-215	ENST00000488596	RNF7	Q9UBF6	113 aa		4.05	□□□□□ -1.76
CD46-215	ENST00000488596	DNAJC9-AS1	A6NH13	148 aa		4.04	□□□□□ -1.76
CD46-215	ENST00000488596	CGB1	A6NKQ9	187 aa		4.04	□□□□□ -1.76
CD46-215	ENST00000488596	PLIN1	O60240	522 aa		4.04	□□□□□ -1.76
CD46-215	ENST00000488596	HAUS5	O94927	633 aa		4.04	□□□□□ -1.76
CD46-215	ENST00000488596	GNAI3	P08754	354 aa		4.04	□□□□□ -1.76
CD46-215	ENST00000488596	ALAS1	P13196	640 aa		4.04	□□□□□ -1.76
CD46-215	ENST00000488596	SLC5A1	P13866	664 aa		4.04	□□□□□ -1.76
CD46-215	ENST00000488596	FGFR4	P22455	802 aa		4.04	□□□□□ -1.76
CD46-215	ENST00000488596	SLC7A1	P30825	629 aa		4.04	□□□□□ -1.76
CD46-215	ENST00000488596	KCNJ5	P48544	419 aa		4.04	□□□□□ -1.76
CD46-215	ENST00000488596	SUMO3	P55854	103 aa	Predicted RBP	4.04	□□□□□ -1.76
CD46-215	ENST00000488596	GNAI1	P63096	354 aa		4.04	□□□□□ -1.76
CD46-215	ENST00000488596	NSUN7	Q8NE18	718 aa	Known RBP	4.04	□□□□□ -1.76
CD46-215	ENST00000488596	TMIE	Q8NEW7	156 aa		4.04	□□□□□ -1.76
CD46-215	ENST00000488596	MARS2	Q96GW9	593 aa	Known RBP	4.04	□□□□□ -1.76
CD46-215	ENST00000488596	KLHL32	Q96NJ5	620 aa		4.04	□□□□□ -1.76
CD46-215	ENST00000488596	TBCB	Q99426	244 aa		4.04	□□□□□ -1.76
CD46-215	ENST00000488596	IMPG2	Q9BZV3	1241 aa		4.04	□□□□□ -1.76
CD46-215	ENST00000488596	CNNM1	Q9NRU3	951 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms