RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 ANKS3Q6ZW76 656 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 IRF2BP2Q7Z5L9 587 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 METTL23Q86XA0 190 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 FMNL3Q8IVF7 1028 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 GPR65Q8IYL9 337 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 OR8K1Q8NGG5 319 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 OR6B3Q8NGW1 331 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 TMEM176AQ96HP8 235 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 PANX2Q96RD6 677 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 ACBD6Q9BR61 282 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 SYT11Q9BT88 431 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 C11orf84Q9BUA3 381 aaPredicted RBP10.21□□□□□ -0.77
MCF2L-227ENST00000486806 NT5C1AQ9BXI3 368 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 SNX25Q9H3E2 840 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 DPEP3Q9H4B8 488 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 ACP6Q9NPH0 428 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 DDX43Q9NXZ2 648 aaKnown RBP10.21□□□□□ -0.77
MCF2L-227ENST00000486806 MTRRQ9UBK8 725 aa10.21□□□□□ -0.77
MCF2L-227ENST00000486806 CHD9Q3L8U1 2897 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 GOLGA6L6A8MZA4 724 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 LILRB3O75022 631 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 CTSAP10619 480 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 CYP11B1P15538 503 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 FERP16591 822 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 ACAT1P24752 427 aaKnown RBP10.2□□□□□ -0.78
MCF2L-227ENST00000486806 DNAJB1P25685 340 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 PCSK1P29120 753 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 GNL1P36915 607 aaPredicted RBP10.2□□□□□ -0.78
MCF2L-227ENST00000486806 GLUD2P49448 558 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 KRT17Q04695 432 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 PTPN14Q15678 1187 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 ASIC2Q16515 512 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 CCDC142Q17RM4 750 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 ZNF394Q53GI3 561 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 INTS6LQ5JSJ4 861 aaKnown RBP10.2□□□□□ -0.78
MCF2L-227ENST00000486806 CCDC186Q7Z3E2 898 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 NOP9Q86U38 636 aaKnown RBP10.2□□□□□ -0.78
MCF2L-227ENST00000486806 SLC47A2Q86VL8 602 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 CEP57Q86XR8 500 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 GPIHBP1Q8IV16 184 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 TMEM139Q8IV31 216 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 VPS52Q8N1B4 723 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 CRYBG2Q8N1P7 616 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 B3GALNT2Q8NCR0 500 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 LNX1Q8TBB1 728 aaPredicted RBP10.2□□□□□ -0.78
MCF2L-227ENST00000486806 SPPL3Q8TCT6 385 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 DDX1Q92499 740 aaKnown RBP10.2□□□□□ -0.78
MCF2L-227ENST00000486806 GBF1Q92538 1859 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 TIFAQ96CG3 184 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 SYT15Q9BQS2 421 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 ZSWIM1Q9BR11 485 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 OXCT2Q9BYC2 517 aaPredicted RBP10.2□□□□□ -0.78
MCF2L-227ENST00000486806 ZCWPW1Q9H0M4 648 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 CRTAC1Q9NQ79 661 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 NOCTQ9UK39 431 aaKnown RBP10.2□□□□□ -0.78
MCF2L-227ENST00000486806 CDH9Q9ULB4 789 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 MTUS1Q9ULD2 1270 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 COLQQ9Y215 455 aaPredicted RBP10.2□□□□□ -0.78
MCF2L-227ENST00000486806 BACE2Q9Y5Z0 518 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 CHD7Q9P2D1 2997 aa10.2□□□□□ -0.78
MCF2L-227ENST00000486806 VWA8A3KMH1 1905 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 EPOPA6NHQ4 379 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 OR6C75A6NL08 312 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 H3BNC9 293 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 H7C4K7 107 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 FSCN2O14926 492 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 CALCAP01258 141 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 URODP06132 367 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 PDGFRBP09619 1106 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 GNA15P30679 374 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 USP8P40818 1118 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 PDE6CP51160 858 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 PSMC1P62191 440 aaKnown RBP10.19□□□□□ -0.78
MCF2L-227ENST00000486806 CDK17Q00537 523 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 CAMK1Q14012 370 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 PSMD5Q16401 504 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 CTXN3Q4LDR2 81 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 ARHGAP17Q68EM7 881 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 SLC8B1Q6J4K2 584 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 FAM171BQ6P995 826 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 PRSS55Q6UWB4 352 aaPredicted RBP10.19□□□□□ -0.78
MCF2L-227ENST00000486806 RSPO2Q6UXX9 243 aaPredicted RBP10.19□□□□□ -0.78
MCF2L-227ENST00000486806 ACOT1Q86TX2 421 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 THEM5Q8N1Q8 247 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 FBXO22Q8NEZ5 403 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 POF1BQ8WVV4 589 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 RIN2Q8WYP3 895 aaPredicted RBP10.19□□□□□ -0.78
MCF2L-227ENST00000486806 TFAP2BQ92481 460 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 TNIP3Q96KP6 325 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 TMEM209Q96SK2 561 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 SLC28A3Q9HAS3 691 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 RXFP1Q9HBX9 757 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 ALG13Q9NP73 1137 aaKnown RBP10.19□□□□□ -0.78
MCF2L-227ENST00000486806 ARHGAP20Q9P2F6 1191 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 IRAK3Q9Y616 596 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 PDE4DIPQ5VU43 2346 aa10.19□□□□□ -0.78
MCF2L-227ENST00000486806 TMEM265A0A087WTH1 108 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 MYBPHLA2RUH7 354 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 O00370 1275 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 GRM6O15303 877 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms