RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 HDAC7Q8WUI4 952 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 RSAD2Q8WXG1 361 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 MAP4K1Q92918 833 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 CENPTQ96BT3 561 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 ZNF668Q96K58 619 aaPredicted RBP7.47□□□□□ -1.21
HDAC3-209ENST00000486618 FAM193BQ96PV7 902 aaPredicted RBP7.47□□□□□ -1.21
HDAC3-209ENST00000486618 TMEM175Q9BSA9 504 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 GBP3Q9H0R5 595 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 DNAJC25Q9H1X3 360 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 C12orf49Q9H741 205 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 PIDD1Q9HB75 910 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 KMT5AQ9NQR1 393 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 ARHGEF3Q9NR81 526 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.47□□□□□ -1.21
HDAC3-209ENST00000486618 KANSL3Q9P2N6 904 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 EGFL7Q9UHF1 273 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 TAF6LQ9Y6J9 622 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 CLUHO75153 1309 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 MAP1BP46821 2468 aaKnown RBP7.46□□□□□ -1.21
HDAC3-209ENST00000486618 IGLV3-22A0A075B6J6 115 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 ERICH4A6NGS2 130 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 WDR64B1ANS9 1081 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 FAM86B1E9PN63 330 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 INPPL1O15357 1258 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 SGSM2O43147 1006 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 LAMTOR5O43504 91 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 OFD1O75665 1012 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 GLUD1P00367 558 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 C1RP00736 705 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 FAM86B2P0C5J1 330 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 FGFR4P22455 802 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 CHMLP26374 656 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 AK2P54819 239 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 LMNB2Q03252 620 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 DNTTIP2Q5QJE6 756 aaKnown RBP7.46□□□□□ -1.22
HDAC3-209ENST00000486618 TTC22Q5TAA0 569 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 JAKMIP3Q5VZ66 844 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 ZNF410Q86VK4 478 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 MICU3Q86XE3 530 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 RAB11FIP4Q86YS3 637 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 MYO1HQ8N1T3 1032 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 BCL7CQ8WUZ0 217 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-209ENST00000486618 SMG7Q92540 1137 aaKnown RBP7.46□□□□□ -1.22
HDAC3-209ENST00000486618 LPPQ93052 612 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 PHKBQ93100 1093 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 SKA1Q96BD8 255 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 BCO2Q9BYV7 579 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 PLEKHA4Q9H4M7 779 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 MAN1C1Q9NR34 630 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 SLC2A4RGQ9NR83 387 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 DISC1Q9NRI5 854 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 FAM105AQ9NUU6 356 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 BARHL2Q9NY43 387 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 UTP6Q9NYH9 597 aaKnown RBP7.46□□□□□ -1.22
HDAC3-209ENST00000486618 DLGAP2Q9P1A6 1054 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 DNAJB4Q9UDY4 337 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 FBXO4Q9UKT5 387 aa7.46□□□□□ -1.22
HDAC3-209ENST00000486618 PIN4Q9Y237 131 aaKnown RBP7.46□□□□□ -1.22
HDAC3-209ENST00000486618 FNDC3AQ9Y2H6 1198 aaKnown RBP7.46□□□□□ -1.22
HDAC3-209ENST00000486618 RBM8AQ9Y5S9 174 aaKnown RBP7.46□□□□□ -1.22
HDAC3-209ENST00000486618 ZFP37Q9Y6Q3 630 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-209ENST00000486618 KMT2BQ9UMN6 2715 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-209ENST00000486618 A0A087WZ62 844 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 N4BP1O75113 896 aaKnown RBP7.45□□□□□ -1.22
HDAC3-209ENST00000486618 DEAF1O75398 565 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-209ENST00000486618 CSDE1O75534 798 aaKnown RBP7.45□□□□□ -1.22
HDAC3-209ENST00000486618 TPPPO94811 219 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 SOD2P04179 222 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 LAMP2P13473 410 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 SFNP31947 248 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 MAGEA9P43362 315 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 JAK3P52333 1124 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 ATXN1P54253 815 aaKnown RBP7.45□□□□□ -1.22
HDAC3-209ENST00000486618 STARD6P59095 220 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 PRKCEQ02156 737 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 PDE1CQ14123 709 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-209ENST00000486618 PRR16Q569H4 304 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 C16orf87Q6PH81 154 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 CATSPER4Q7RTX7 472 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 C11orf74Q86VG3 221 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 SGMS1Q86VZ5 419 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 ATCAYQ86WG3 371 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 ZNF280BQ86YH2 543 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 IQCF2Q8IXL9 164 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 MNS1Q8NEH6 495 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 PJA1Q8NG27 643 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 FEZF2Q8TBJ5 459 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 CCDC12Q8WUD4 166 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-209ENST00000486618 CRYGNQ8WXF5 182 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 MYADMQ96S97 322 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 FDXACB1Q9BRP7 624 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-209ENST00000486618 RTKNQ9BST9 563 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 HERC2P3Q9BVR0 1158 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 VN1R3Q9BXE9 311 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 RBSNQ9H1K0 784 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 PTPRHQ9HD43 1115 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 C6orf50Q9HD87 102 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 SPATA6Q9NWH7 488 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-209ENST00000486618 PCDHGA2Q9Y5H1 932 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 CNTNAP2Q9UHC6 1331 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms