RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 CMTR2Q8IYT2 770 aaKnown RBP12.07□□□□□ -0.48
SND1-212ENST00000485871 PDCL2Q8N4E4 241 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 TTC39CQ8N584 583 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 SLC4A11Q8NBS3 891 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 FAM122AQ96E09 287 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 SUSD3Q96L08 255 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 MMS19Q96T76 1030 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 EIF3CQ99613 913 aaKnown RBP12.07□□□□□ -0.48
SND1-212ENST00000485871 TUBB2BQ9BVA1 445 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 PLXNA4Q9HCM2 1894 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 ADGRG1Q9Y653 693 aa12.07□□□□□ -0.48
SND1-212ENST00000485871 EPN1Q9Y6I3 576 aaPredicted RBP12.07□□□□□ -0.48
SND1-212ENST00000485871 CYB561D2O14569 222 aa12.06□□□□□ -0.48
SND1-212ENST00000485871 HCRTO43612 131 aa12.06□□□□□ -0.48
SND1-212ENST00000485871 GJB5O95377 273 aa12.06□□□□□ -0.48
SND1-212ENST00000485871 PAEPP09466 180 aa12.06□□□□□ -0.48
SND1-212ENST00000485871 CDR2Q01850 454 aa12.06□□□□□ -0.48
SND1-212ENST00000485871 RNASELQ05823 741 aaKnown RBP12.06□□□□□ -0.48
SND1-212ENST00000485871 BMS1Q14692 1282 aaKnown RBP12.06□□□□□ -0.48
SND1-212ENST00000485871 SLC18A3Q16572 532 aa12.06□□□□□ -0.48
SND1-212ENST00000485871 PAN2Q504Q3 1202 aaKnown RBP12.06□□□□□ -0.48
SND1-212ENST00000485871 TJAP1Q5JTD0 557 aa12.06□□□□□ -0.48
SND1-212ENST00000485871 WSCD1Q658N2 575 aa12.06□□□□□ -0.48
SND1-212ENST00000485871 UNC93AQ86WB7 457 aa12.06□□□□□ -0.48
SND1-212ENST00000485871 TMEM173Q86WV6 379 aaPredicted RBP12.06□□□□□ -0.48
SND1-212ENST00000485871 REXO1L1PQ8IX06 675 aa12.06□□□□□ -0.48
SND1-212ENST00000485871 RNF168Q8IYW5 571 aaPredicted RBP12.06□□□□□ -0.48
SND1-212ENST00000485871 ADGRF2Q8IZF7 708 aa12.06□□□□□ -0.48
SND1-212ENST00000485871 SPATA18Q8TC71 538 aa12.06□□□□□ -0.48
SND1-212ENST00000485871 HASPINQ8TF76 798 aa12.06□□□□□ -0.48
SND1-212ENST00000485871 BCL7CQ8WUZ0 217 aaPredicted RBP12.06□□□□□ -0.48
SND1-212ENST00000485871 TFAP2BQ92481 460 aa12.06□□□□□ -0.48
SND1-212ENST00000485871 ZNF592Q92610 1267 aa12.06□□□□□ -0.48
SND1-212ENST00000485871 PCDHB18PQ96TA0 734 aa12.06□□□□□ -0.48
SND1-212ENST00000485871 AGPAT1Q99943 283 aa12.06□□□□□ -0.48
SND1-212ENST00000485871 RTP3Q9BQQ7 232 aa12.06□□□□□ -0.48
SND1-212ENST00000485871 MYO1AQ9UBC5 1043 aa12.06□□□□□ -0.48
SND1-212ENST00000485871 RAPGEFL1Q9UHV5 662 aa12.06□□□□□ -0.48
SND1-212ENST00000485871 PATJQ8NI35 1801 aa12.06□□□□□ -0.48
SND1-212ENST00000485871 MYH10P35580 1976 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 I3L4J1 428 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 CLSTN1O94985 981 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 MMEP08473 750 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 CFHP08603 1231 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 TYMPP19971 482 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 LMO2P25791 158 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 GNA15P30679 374 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 CYLC1P35663 651 aaPredicted RBP12.05□□□□□ -0.48
SND1-212ENST00000485871 OR1G1P47890 313 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 PDE6CP51160 858 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 BCAR1P56945 870 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 BPIFB4P59827 614 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 GFPT1Q06210 699 aaPredicted RBP12.05□□□□□ -0.48
SND1-212ENST00000485871 ZNF394Q53GI3 561 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 KIAA0319Q5VV43 1072 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 ZNF677Q86XU0 584 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 CRYBG2Q8N1P7 616 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 TMEM86AQ8N2M4 240 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 TXLNBQ8N3L3 684 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 ACRBPQ8NEB7 543 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 APPL2Q8NEU8 664 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 SP7Q8TDD2 431 aaPredicted RBP12.05□□□□□ -0.48
SND1-212ENST00000485871 ZNF606Q8WXB4 792 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 TMEM176AQ96HP8 235 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 CCDC42Q96M95 316 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 FAM193BQ96PV7 902 aaPredicted RBP12.05□□□□□ -0.48
SND1-212ENST00000485871 SLC9A7Q96T83 725 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 DESI2Q9BSY9 194 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 L2HGDHQ9H9P8 463 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 ADAMTS1Q9UHI8 967 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 PRG3Q9Y2Y8 225 aaPredicted RBP12.05□□□□□ -0.48
SND1-212ENST00000485871 ATP8B3O60423 1300 aa12.05□□□□□ -0.48
SND1-212ENST00000485871 TTC28Q96AY4 2481 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 TMEM265A0A087WTH1 108 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 A0A0U1RQJ8 604 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 O00370 1275 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 HUS1O60921 280 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 IPO7O95373 1038 aaKnown RBP12.04□□□□□ -0.48
SND1-212ENST00000485871 SLU7O95391 586 aaKnown RBP12.04□□□□□ -0.48
SND1-212ENST00000485871 CYP1A1P04798 512 aaPredicted RBP12.04□□□□□ -0.48
SND1-212ENST00000485871 ALDH2P05091 517 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 UNGP13051 313 aaPredicted RBP12.04□□□□□ -0.48
SND1-212ENST00000485871 BRD2P25440 801 aaKnown RBP12.04□□□□□ -0.48
SND1-212ENST00000485871 CDH5P33151 784 aaPredicted RBP12.04□□□□□ -0.48
SND1-212ENST00000485871 PLA2G5P39877 138 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 PBX3P40426 434 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 KRT83P78385 493 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 ORC1Q13415 861 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 SHHQ15465 462 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 TAF3Q5VWG9 929 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 FAM117BQ6P1L5 589 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 DSTYKQ6XUX3 929 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 ZNF662Q6ZS27 426 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 GLYCTKQ8IVS8 523 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 OR6B3Q8NGW1 331 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 PHOSPHO2Q8TCD6 241 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 ATRIPQ8WXE1 791 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 VN1R3Q9BXE9 311 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 NT5C1AQ9BXI3 368 aa12.04□□□□□ -0.48
SND1-212ENST00000485871 GPR62Q9BZJ7 368 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms