RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 NUB1Q9Y5A7 615 aa13.27□□□□□ -0.29
SSR4-210ENST00000485612 PRAMEF12O95522 483 aa13.26□□□□□ -0.29
SSR4-210ENST00000485612 HARSP12081 509 aaKnown RBP13.26□□□□□ -0.29
SSR4-210ENST00000485612 ENGP17813 658 aa13.26□□□□□ -0.29
SSR4-210ENST00000485612 BCKDHBP21953 392 aa13.26□□□□□ -0.29
SSR4-210ENST00000485612 WEE1P30291 646 aa13.26□□□□□ -0.29
SSR4-210ENST00000485612 ALDH1A3P47895 512 aa13.26□□□□□ -0.29
SSR4-210ENST00000485612 FAM193AP78312 1265 aa13.26□□□□□ -0.29
SSR4-210ENST00000485612 GNL2Q13823 731 aaKnown RBP13.26□□□□□ -0.29
SSR4-210ENST00000485612 SEZ6Q53EL9 994 aa13.26□□□□□ -0.29
SSR4-210ENST00000485612 XKR4Q5GH76 650 aa13.26□□□□□ -0.29
SSR4-210ENST00000485612 GAREM2Q75VX8 874 aa13.26□□□□□ -0.29
SSR4-210ENST00000485612 HDDC3Q8N4P3 179 aa13.26□□□□□ -0.29
SSR4-210ENST00000485612 APPL2Q8NEU8 664 aa13.26□□□□□ -0.29
SSR4-210ENST00000485612 BEST2Q8NFU1 509 aa13.26□□□□□ -0.29
SSR4-210ENST00000485612 TSTD1Q8NFU3 115 aa13.26□□□□□ -0.29
SSR4-210ENST00000485612 C18orf25Q96B23 403 aaPredicted RBP13.26□□□□□ -0.29
SSR4-210ENST00000485612 KIF2CQ99661 725 aa13.26□□□□□ -0.29
SSR4-210ENST00000485612 FAM83CQ9BQN1 747 aa13.26□□□□□ -0.29
SSR4-210ENST00000485612 LLPHQ9BRT6 129 aaKnown RBP13.26□□□□□ -0.29
SSR4-210ENST00000485612 MMTAG2Q9BU76 263 aaKnown RBP13.26□□□□□ -0.29
SSR4-210ENST00000485612 CCDC94Q9BW85 323 aaPredicted RBP13.26□□□□□ -0.29
SSR4-210ENST00000485612 TPSD1Q9BZJ3 242 aa13.26□□□□□ -0.29
SSR4-210ENST00000485612 SCUBE2Q9NQ36 999 aa13.26□□□□□ -0.29
SSR4-210ENST00000485612 HPS4Q9NQG7 708 aa13.26□□□□□ -0.29
SSR4-210ENST00000485612 ARHGAP28Q9P2N2 729 aa13.26□□□□□ -0.29
SSR4-210ENST00000485612 RAXQ9Y2V3 346 aa13.26□□□□□ -0.29
SSR4-210ENST00000485612 IGSF10Q6WRI0 2623 aa13.26□□□□□ -0.29
SSR4-210ENST00000485612 MYO16Q9Y6X6 1858 aa13.25□□□□□ -0.29
SSR4-210ENST00000485612 OTOL1A6NHN0 477 aaPredicted RBP13.25□□□□□ -0.29
SSR4-210ENST00000485612 SFI1A8K8P3 1242 aa13.25□□□□□ -0.29
SSR4-210ENST00000485612 SLC16A4O15374 487 aa13.25□□□□□ -0.29
SSR4-210ENST00000485612 FGF19O95750 216 aa13.25□□□□□ -0.29
SSR4-210ENST00000485612 PROZP22891 400 aa13.25□□□□□ -0.29
SSR4-210ENST00000485612 GABRR2P28476 465 aa13.25□□□□□ -0.29
SSR4-210ENST00000485612 TRAPPC10P48553 1259 aa13.25□□□□□ -0.29
SSR4-210ENST00000485612 RAD51AP2Q09MP3 1159 aa13.25□□□□□ -0.29
SSR4-210ENST00000485612 DUSP4Q13115 394 aa13.25□□□□□ -0.29
SSR4-210ENST00000485612 PSMD2Q13200 908 aa13.25□□□□□ -0.29
SSR4-210ENST00000485612 TRIM68Q6AZZ1 485 aa13.25□□□□□ -0.29
SSR4-210ENST00000485612 RINT1Q6NUQ1 792 aa13.25□□□□□ -0.29
SSR4-210ENST00000485612 DNAJB7Q7Z6W7 309 aaPredicted RBP13.25□□□□□ -0.29
SSR4-210ENST00000485612 FAM184AQ8NB25 1140 aa13.25□□□□□ -0.29
SSR4-210ENST00000485612 MDM1Q8TC05 714 aa13.25□□□□□ -0.29
SSR4-210ENST00000485612 DDX12PQ92771 950 aa13.25□□□□□ -0.29
SSR4-210ENST00000485612 ACDQ96AP0 544 aa13.25□□□□□ -0.29
SSR4-210ENST00000485612 SUSD3Q96L08 255 aa13.25□□□□□ -0.29
SSR4-210ENST00000485612 PGLYRP2Q96PD5 576 aa13.25□□□□□ -0.29
SSR4-210ENST00000485612 P2RY13Q9BPV8 354 aa13.25□□□□□ -0.29
SSR4-210ENST00000485612 EBF3Q9H4W6 596 aa13.25□□□□□ -0.29
SSR4-210ENST00000485612 TASP1Q9H6P5 420 aa13.25□□□□□ -0.29
SSR4-210ENST00000485612 TMEM134Q9H6X4 195 aa13.25□□□□□ -0.29
SSR4-210ENST00000485612 KMT5AQ9NQR1 393 aa13.25□□□□□ -0.29
SSR4-210ENST00000485612 SLC38A7Q9NVC3 462 aa13.25□□□□□ -0.29
SSR4-210ENST00000485612 NOL7Q9UMY1 257 aaKnown RBP13.25□□□□□ -0.29
SSR4-210ENST00000485612 NUP205Q92621 2012 aa13.25□□□□□ -0.29
SSR4-210ENST00000485612 VNN2O95498 520 aa13.24□□□□□ -0.29
SSR4-210ENST00000485612 PRB1P04280 392 aa13.24□□□□□ -0.29
SSR4-210ENST00000485612 U2AF2P26368 475 aaKnown RBP eCLIP13.24□□□□□ -0.294e-16■□□□□ 10.9
SSR4-210ENST00000485612 MARCKSP29966 332 aaPredicted RBP13.24□□□□□ -0.29
SSR4-210ENST00000485612 RPL9P32969 192 aaKnown RBP13.24□□□□□ -0.29
SSR4-210ENST00000485612 ATXN3P54252 364 aaPredicted RBP13.24□□□□□ -0.29
SSR4-210ENST00000485612 YARSP54577 528 aaKnown RBP13.24□□□□□ -0.29
SSR4-210ENST00000485612 HMGN5P82970 282 aaKnown RBP13.24□□□□□ -0.29
SSR4-210ENST00000485612 PDIA5Q14554 519 aa13.24□□□□□ -0.29
SSR4-210ENST00000485612 MPZL3Q6UWV2 235 aa13.24□□□□□ -0.29
SSR4-210ENST00000485612 CCNI2Q6ZMN8 369 aaPredicted RBP13.24□□□□□ -0.29
SSR4-210ENST00000485612 C1orf186Q6ZWK4 172 aa13.24□□□□□ -0.29
SSR4-210ENST00000485612 SYT12Q8IV01 421 aa13.24□□□□□ -0.29
SSR4-210ENST00000485612 EXOC4Q96A65 974 aa13.24□□□□□ -0.29
SSR4-210ENST00000485612 MRPL4Q9BYD3 311 aaKnown RBP13.24□□□□□ -0.29
SSR4-210ENST00000485612 SMG9Q9H0W8 520 aaKnown RBP13.24□□□□□ -0.29
SSR4-210ENST00000485612 CRISPLD1Q9H336 500 aa13.24□□□□□ -0.29
SSR4-210ENST00000485612 TMEM74BQ9NUR3 256 aa13.24□□□□□ -0.29
SSR4-210ENST00000485612 MBD1Q9UIS9 605 aaPredicted RBP13.24□□□□□ -0.29
SSR4-210ENST00000485612 SLC27A5Q9Y2P5 690 aa13.24□□□□□ -0.29
SSR4-210ENST00000485612 ASB3Q9Y575 518 aa13.24□□□□□ -0.29
SSR4-210ENST00000485612 ASCC3Q8N3C0 2202 aaKnown RBP13.24□□□□□ -0.29
SSR4-210ENST00000485612 PCNX2A6NKB5 2137 aa13.24□□□□□ -0.29
SSR4-210ENST00000485612 ANAPC1Q9H1A4 1944 aa13.23□□□□□ -0.29
SSR4-210ENST00000485612 TNFRSF10BO14763 440 aa13.23□□□□□ -0.29
SSR4-210ENST00000485612 OR4Q2P0C623 313 aa13.23□□□□□ -0.29
SSR4-210ENST00000485612 MCF2P10911 925 aa13.23□□□□□ -0.29
SSR4-210ENST00000485612 KCNE1P15382 129 aa13.23□□□□□ -0.29
SSR4-210ENST00000485612 MCM4P33991 863 aa13.23□□□□□ -0.29
SSR4-210ENST00000485612 CYP4F8P98187 520 aa13.23□□□□□ -0.29
SSR4-210ENST00000485612 DMP1Q13316 513 aaPredicted RBP13.23□□□□□ -0.29
SSR4-210ENST00000485612 HNRNPDQ14103 355 aaKnown RBP13.23□□□□□ -0.29
SSR4-210ENST00000485612 ZRSR1Q15695 479 aaKnown RBP13.23□□□□□ -0.29
SSR4-210ENST00000485612 SLC23A3Q6PIS1 610 aa13.23□□□□□ -0.29
SSR4-210ENST00000485612 APBB1IPQ7Z5R6 666 aaPredicted RBP13.23□□□□□ -0.29
SSR4-210ENST00000485612 RASSF3Q86WH2 238 aa13.23□□□□□ -0.29
SSR4-210ENST00000485612 ABCA7Q8IZY2 2146 aa13.23□□□□□ -0.29
SSR4-210ENST00000485612 PSMG2Q969U7 264 aa13.23□□□□□ -0.29
SSR4-210ENST00000485612 TBC1D32Q96NH3 1257 aa13.23□□□□□ -0.29
SSR4-210ENST00000485612 ACAP3Q96P50 834 aa13.23□□□□□ -0.29
SSR4-210ENST00000485612 PNMA5Q96PV4 448 aa13.23□□□□□ -0.29
SSR4-210ENST00000485612 PLIN2Q99541 437 aa13.23□□□□□ -0.29
SSR4-210ENST00000485612 SLC46A2Q9BY10 475 aa13.23□□□□□ -0.29
SSR4-210ENST00000485612 HAPLN2Q9GZV7 340 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms