RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 ASTLQ6HA08 431 aaPredicted RBP10.96□□□□□ -0.65
CCM2-208ENST00000476594 TRAPPC11Q7Z392 1133 aa10.96□□□□□ -0.65
CCM2-208ENST00000476594 SPATA2LQ8IUW3 424 aaPredicted RBP10.96□□□□□ -0.65
CCM2-208ENST00000476594 SIX5Q8N196 739 aa10.96□□□□□ -0.65
CCM2-208ENST00000476594 ATAD1Q8NBU5 361 aa10.96□□□□□ -0.65
CCM2-208ENST00000476594 KIAA0895Q8NCT3 520 aa10.96□□□□□ -0.65
CCM2-208ENST00000476594 ZSWIM2Q8NEG5 633 aa10.96□□□□□ -0.65
CCM2-208ENST00000476594 FLCNQ8NFG4 579 aa10.96□□□□□ -0.65
CCM2-208ENST00000476594 OR10T2Q8NGX3 314 aa10.96□□□□□ -0.65
CCM2-208ENST00000476594 FEZF2Q8TBJ5 459 aa10.96□□□□□ -0.65
CCM2-208ENST00000476594 TMEM174Q8WUU8 243 aa10.96□□□□□ -0.65
CCM2-208ENST00000476594 DEPDC1BQ8WUY9 529 aa10.96□□□□□ -0.65
CCM2-208ENST00000476594 RSAD2Q8WXG1 361 aa10.96□□□□□ -0.65
CCM2-208ENST00000476594 FGF14Q92915 247 aa10.96□□□□□ -0.65
CCM2-208ENST00000476594 ELSPBP1Q96BH3 223 aa10.96□□□□□ -0.65
CCM2-208ENST00000476594 MCRS1Q96EZ8 462 aa10.96□□□□□ -0.65
CCM2-208ENST00000476594 FUBP3Q96I24 572 aaKnown RBP eCLIP10.96□□□□□ -0.65
CCM2-208ENST00000476594 MMS19Q96T76 1030 aa10.96□□□□□ -0.65
CCM2-208ENST00000476594 DNAI2Q9GZS0 605 aa10.96□□□□□ -0.65
CCM2-208ENST00000476594 ABCB6Q9NP58 842 aa10.96□□□□□ -0.65
CCM2-208ENST00000476594 CEP72Q9P209 647 aa10.96□□□□□ -0.65
CCM2-208ENST00000476594 UXTQ9UBK9 157 aaPredicted RBP10.96□□□□□ -0.65
CCM2-208ENST00000476594 CIZ1Q9ULV3 898 aaPredicted RBP10.96□□□□□ -0.65
CCM2-208ENST00000476594 L1RE1Q9UN81 338 aa10.96□□□□□ -0.65
CCM2-208ENST00000476594 SCN1AP35498 2009 aa10.96□□□□□ -0.66
CCM2-208ENST00000476594 DPYSL4O14531 572 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 STAU1O95793 577 aaKnown RBP10.95□□□□□ -0.66
CCM2-208ENST00000476594 NR3C1P04150 777 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 CSH1P0DML2 217 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 CSH2P0DML3 217 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 KRT13P13646 458 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 CEBPBP17676 345 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 WNT7BP56706 349 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 PRKCQQ04759 706 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 FAM160A1Q05DH4 1040 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 DPYDQ12882 1025 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 STIM1Q13586 685 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 SLC5A9Q2M3M2 681 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 CEP135Q66GS9 1140 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 PARM1Q6UWI2 310 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 YAF2Q8IY57 180 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 GUF1Q8N442 669 aaKnown RBP10.95□□□□□ -0.66
CCM2-208ENST00000476594 CCDC150Q8NCX0 1101 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 OR5B17Q8NGF7 314 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 GPR152Q8TDT2 470 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 SMARCD2Q92925 531 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 BORCS6Q96GS4 357 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 IMPG2Q9BZV3 1241 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 SNX25Q9H3E2 840 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 ATXN3LQ9H3M9 355 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 GDPD2Q9HCC8 539 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 ARHGEF3Q9NR81 526 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 EHD2Q9NZN4 543 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 SIX4Q9UIU6 781 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 CDH9Q9ULB4 789 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 TRAF3IP3Q9Y228 551 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 SLC27A5Q9Y2P5 690 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 TSC2P49815 1807 aa10.95□□□□□ -0.66
CCM2-208ENST00000476594 ATP8B3O60423 1300 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 MAPK13O15264 365 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 NARSO43776 548 aaKnown RBP10.94□□□□□ -0.66
CCM2-208ENST00000476594 KINO60870 393 aaKnown RBP10.94□□□□□ -0.66
CCM2-208ENST00000476594 HAPLN1P10915 354 aaPredicted RBP10.94□□□□□ -0.66
CCM2-208ENST00000476594 AOC1P19801 751 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 WARSP23381 471 aaKnown RBP10.94□□□□□ -0.66
CCM2-208ENST00000476594 DDX6P26196 483 aaKnown RBP eCLIP10.94□□□□□ -0.66
CCM2-208ENST00000476594 ANXA13P27216 316 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 GABRR2P28476 465 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 PPP1R2P41236 205 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 NFIL3Q16649 462 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 WDR72Q3MJ13 1102 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 CFAP221Q4G0U5 840 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 PHLDB3Q6NSJ2 640 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 C1orf228Q6PIY5 440 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 INTS8Q75QN2 995 aaKnown RBP10.94□□□□□ -0.66
CCM2-208ENST00000476594 DNAJB7Q7Z6W7 309 aaPredicted RBP10.94□□□□□ -0.66
CCM2-208ENST00000476594 TMEM130Q8N3G9 435 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 TMC2Q8TDI7 906 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 DNASE1L2Q92874 299 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 IRF7Q92985 503 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 CEP295NLQ96MC4 621 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 TIGD1Q96MW7 591 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 ASB16Q96NS5 453 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 GSDMAQ96QA5 445 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 TMEM209Q96SK2 561 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 TSG101Q99816 390 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 KXD1Q9BQD3 176 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 SYT15Q9BQS2 421 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 KCTD10Q9H3F6 313 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 GOLPH3LQ9H4A5 285 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 BRD9Q9H8M2 597 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 CA14Q9ULX7 337 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 MRPS17Q9Y2R5 130 aaKnown RBP10.94□□□□□ -0.66
CCM2-208ENST00000476594 MUC6Q6W4X9 2439 aa10.94□□□□□ -0.66
CCM2-208ENST00000476594 ZNF318Q5VUA4 2279 aa10.93□□□□□ -0.66
CCM2-208ENST00000476594 A0A1W2PRU2 124 aa10.93□□□□□ -0.66
CCM2-208ENST00000476594 SOBPA7XYQ1 873 aa10.93□□□□□ -0.66
CCM2-208ENST00000476594 GABRDO14764 452 aa10.93□□□□□ -0.66
CCM2-208ENST00000476594 IKBKBO14920 756 aa10.93□□□□□ -0.66
CCM2-208ENST00000476594 NCAM2O15394 837 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms