RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 ADAM23O75077 832 aa14.52□□□□□ -0.09
HDAC1-206ENST00000476391 ATP6V1B1P15313 513 aa14.52□□□□□ -0.09
HDAC1-206ENST00000476391 PHKA2P46019 1235 aa14.52□□□□□ -0.09
HDAC1-206ENST00000476391 CDK9P50750 372 aaKnown RBP14.52□□□□□ -0.09
HDAC1-206ENST00000476391 HIRAP54198 1017 aaPredicted RBP14.52□□□□□ -0.09
HDAC1-206ENST00000476391 OGFRL1Q5TC84 451 aaPredicted RBP14.52□□□□□ -0.09
HDAC1-206ENST00000476391 KSR1Q8IVT5 923 aa14.52□□□□□ -0.09
HDAC1-206ENST00000476391 TCP10LQ8TDR4 215 aa14.52□□□□□ -0.09
HDAC1-206ENST00000476391 SLC26A7Q8TE54 656 aa14.52□□□□□ -0.09
HDAC1-206ENST00000476391 PSPC1Q8WXF1 523 aaKnown RBP14.52□□□□□ -0.09
HDAC1-206ENST00000476391 PPP1R10Q96QC0 940 aaKnown RBP14.52□□□□□ -0.09
HDAC1-206ENST00000476391 DCLK3Q9C098 648 aa14.52□□□□□ -0.09
HDAC1-206ENST00000476391 TBC1D23Q9NUY8 699 aa14.52□□□□□ -0.09
HDAC1-206ENST00000476391 FETUBQ9UGM5 382 aa14.52□□□□□ -0.09
HDAC1-206ENST00000476391 COQ6Q9Y2Z9 468 aa14.52□□□□□ -0.09
HDAC1-206ENST00000476391 TRIM17Q9Y577 477 aa14.52□□□□□ -0.09
HDAC1-206ENST00000476391 H3BSA7 217 aa14.51□□□□□ -0.09
HDAC1-206ENST00000476391 PIK3CDO00329 1044 aa14.51□□□□□ -0.09
HDAC1-206ENST00000476391 CCNT2O60583 730 aaKnown RBP14.51□□□□□ -0.09
HDAC1-206ENST00000476391 KRT38O76015 456 aa14.51□□□□□ -0.09
HDAC1-206ENST00000476391 PPARGP37231 505 aaPredicted RBP14.51□□□□□ -0.09
HDAC1-206ENST00000476391 IL6STP40189 918 aaPredicted RBP14.51□□□□□ -0.09
HDAC1-206ENST00000476391 NOP14P78316 857 aaKnown RBP14.51□□□□□ -0.09
HDAC1-206ENST00000476391 CENPCQ03188 943 aa14.51□□□□□ -0.09
HDAC1-206ENST00000476391 C16orf72Q14CZ0 275 aa14.51□□□□□ -0.09
HDAC1-206ENST00000476391 REXO1Q8N1G1 1221 aaKnown RBP14.51□□□□□ -0.09
HDAC1-206ENST00000476391 GCNAQ96QF7 691 aa14.51□□□□□ -0.09
HDAC1-206ENST00000476391 TRPC7Q9HCX4 862 aa14.51□□□□□ -0.09
HDAC1-206ENST00000476391 SAYSD1Q9NPB0 183 aa14.51□□□□□ -0.09
HDAC1-206ENST00000476391 PPP1R1BQ9UD71 204 aaPredicted RBP14.51□□□□□ -0.09
HDAC1-206ENST00000476391 DTNAQ9Y4J8 743 aa14.51□□□□□ -0.09
HDAC1-206ENST00000476391 MEGF6O75095 1541 aa14.51□□□□□ -0.09
HDAC1-206ENST00000476391 EML1O00423 815 aa14.51□□□□□ -0.09
HDAC1-206ENST00000476391 ITM2AO43736 263 aa14.51□□□□□ -0.09
HDAC1-206ENST00000476391 DNAJA2O60884 412 aa14.51□□□□□ -0.09
HDAC1-206ENST00000476391 NFKBIAP25963 317 aa14.51□□□□□ -0.09
HDAC1-206ENST00000476391 BCAP31P51572 246 aa14.51□□□□□ -0.09
HDAC1-206ENST00000476391 KDSRQ06136 332 aa14.51□□□□□ -0.09
HDAC1-206ENST00000476391 ARSHQ5FYA8 562 aa14.51□□□□□ -0.09
HDAC1-206ENST00000476391 DEPDC1Q5TB30 811 aa14.51□□□□□ -0.09
HDAC1-206ENST00000476391 ALYREFQ86V81 257 aaKnown RBP14.51□□□□□ -0.09
HDAC1-206ENST00000476391 SCHIP1Q9P0W5 487 aaPredicted RBP14.51□□□□□ -0.09
HDAC1-206ENST00000476391 MAD1L1Q9Y6D9 718 aa14.51□□□□□ -0.09
HDAC1-206ENST00000476391 GOLGA8TH3BQL2 631 aa14.5□□□□□ -0.09
HDAC1-206ENST00000476391 SLC37A4O43826 429 aa14.5□□□□□ -0.09
HDAC1-206ENST00000476391 NR3C1P04150 777 aa14.5□□□□□ -0.09
HDAC1-206ENST00000476391 GOLGA8HP0CJ92 632 aa14.5□□□□□ -0.09
HDAC1-206ENST00000476391 RFX1P22670 979 aa14.5□□□□□ -0.09
HDAC1-206ENST00000476391 ENTPD1P49961 510 aa14.5□□□□□ -0.09
HDAC1-206ENST00000476391 CLEC16AQ2KHT3 1053 aa14.5□□□□□ -0.09
HDAC1-206ENST00000476391 GRAMD1BQ3KR37 738 aa14.5□□□□□ -0.09
HDAC1-206ENST00000476391 GPBP1Q86WP2 473 aa14.5□□□□□ -0.09
HDAC1-206ENST00000476391 SYNE4Q8N205 404 aa14.5□□□□□ -0.09
HDAC1-206ENST00000476391 TRPC4APQ8TEL6 797 aa14.5□□□□□ -0.09
HDAC1-206ENST00000476391 ZMAT2Q96NC0 199 aaKnown RBP14.5□□□□□ -0.09
HDAC1-206ENST00000476391 SRPK1Q96SB4 655 aaKnown RBP14.5□□□□□ -0.09
HDAC1-206ENST00000476391 CACNA1SQ13698 1873 aa14.5□□□□□ -0.09
HDAC1-206ENST00000476391 ADCY6O43306 1168 aa14.5□□□□□ -0.09
HDAC1-206ENST00000476391 PLA2G4BP0C869 781 aa14.5□□□□□ -0.09
HDAC1-206ENST00000476391 DHRS4L1P0CG22 281 aa14.5□□□□□ -0.09
HDAC1-206ENST00000476391 SLC1A1P43005 524 aa14.5□□□□□ -0.09
HDAC1-206ENST00000476391 ZNF200P98182 395 aaPredicted RBP14.5□□□□□ -0.09
HDAC1-206ENST00000476391 MYBPC1Q00872 1141 aa14.5□□□□□ -0.09
HDAC1-206ENST00000476391 SF3B3Q15393 1217 aaKnown RBP14.5□□□□□ -0.09
HDAC1-206ENST00000476391 BANPQ8N9N5 519 aa14.5□□□□□ -0.09
HDAC1-206ENST00000476391 ATG4AQ8WYN0 398 aa14.5□□□□□ -0.09
HDAC1-206ENST00000476391 PRPF18Q99633 342 aaKnown RBP14.5□□□□□ -0.09
HDAC1-206ENST00000476391 NAP1L4Q99733 375 aaKnown RBP14.5□□□□□ -0.09
HDAC1-206ENST00000476391 TUT1Q9H6E5 874 aaKnown RBP14.5□□□□□ -0.09
HDAC1-206ENST00000476391 IL17RBQ9NRM6 502 aa14.5□□□□□ -0.09
HDAC1-206ENST00000476391 APEX2Q9UBZ4 518 aa14.5□□□□□ -0.09
HDAC1-206ENST00000476391 NIP7Q9Y221 180 aaKnown RBP eCLIP14.5□□□□□ -0.09
HDAC1-206ENST00000476391 MYH14Q7Z406 1995 aaKnown RBP14.49□□□□□ -0.09
HDAC1-206ENST00000476391 ESYT2A0FGR8 921 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 RSPH10B2B2RC85 870 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 KLF11O14901 512 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 TBC1D12O60347 775 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 RSPH10BP0C881 870 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 CPOXP36551 454 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 RXRGP48443 463 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 BCAMP50895 628 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 CDK18Q07002 472 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 CCNIQ14094 377 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 CCDC142Q17RM4 750 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 EFHC2Q5JST6 749 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 RWDD4Q6NW29 188 aaKnown RBP14.49□□□□□ -0.09
HDAC1-206ENST00000476391 ELMSAN1Q6PJG2 1045 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 SGF29Q96ES7 293 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 NEURL2Q9BR09 285 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 HAUS8Q9BT25 410 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 WWP1Q9H0M0 922 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 PPARGC1AQ9UBK2 798 aaKnown RBP14.49□□□□□ -0.09
HDAC1-206ENST00000476391 CICQ96RK0 1608 aaPredicted RBP14.49□□□□□ -0.09
HDAC1-206ENST00000476391 FAM237BA0A1B0GVD1 139 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 DCAF8L1A6NGE4 600 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 C2orf71A6NGG8 1288 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 CAPN8A6NHC0 703 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 ARHGAP42A6NI28 874 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 SOBPA7XYQ1 873 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 SLC26A4O43511 780 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms