RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 TGS1Q96RS0 853 aaKnown RBP10.69□□□□□ -0.7
COL8A1-206ENST00000474648 TTPALQ9BTX7 342 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 HERC2P3Q9BVR0 1158 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 ACP6Q9NPH0 428 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 AIPL1Q9NZN9 384 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 IMPACTQ9P2X3 320 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 DSEQ9UL01 958 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 STXBP5LQ9Y2K9 1186 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 LUC7L2Q9Y383 392 aaKnown RBP10.69□□□□□ -0.7
COL8A1-206ENST00000474648 RWDD3Q9Y3V2 267 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 PCDHB4Q9Y5E5 795 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 CHD9Q3L8U1 2897 aa10.69□□□□□ -0.7
COL8A1-206ENST00000474648 A0A1W2PPC1 479 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 AKR1B15C9JRZ8 316 aaPredicted RBP10.68□□□□□ -0.7
COL8A1-206ENST00000474648 CYP26A1O43174 497 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 CLSTN1O94985 981 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 PDGFRBP09619 1106 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 HOXB1P14653 301 aaPredicted RBP10.68□□□□□ -0.7
COL8A1-206ENST00000474648 DNAJB1P25685 340 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 HNRNPH3P31942 346 aaKnown RBP10.68□□□□□ -0.7
COL8A1-206ENST00000474648 LHX1P48742 406 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 ERVFC1P60507 584 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 YWHAEP62258 255 aaKnown RBP10.68□□□□□ -0.7
COL8A1-206ENST00000474648 DSG1Q02413 1049 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 KRT17Q04695 432 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 ORC1Q13415 861 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 CAMK1Q14012 370 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 USP41Q3LFD5 358 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 LRIT3Q3SXY7 679 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 OVOS1Q6IE37 1185 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 GPR153Q6NV75 609 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 TMEM270Q6UE05 265 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 RSPO2Q6UXX9 243 aaPredicted RBP10.68□□□□□ -0.7
COL8A1-206ENST00000474648 LRRTM3Q86VH5 581 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 METTL23Q86XA0 190 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 CEP57Q86XR8 500 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 GPIHBP1Q8IV16 184 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 TTC39CQ8N584 583 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 SLC4A11Q8NBS3 891 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 RBBP8NLQ8NC74 664 aaPredicted RBP10.68□□□□□ -0.7
COL8A1-206ENST00000474648 OR8K1Q8NGG5 319 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 SYN2Q92777 582 aaPredicted RBP10.68□□□□□ -0.7
COL8A1-206ENST00000474648 TMEM176AQ96HP8 235 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 SAMD11Q96NU1 681 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 SPAG5Q96R06 1193 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 DNAJC7Q99615 494 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 LPIN3Q9BQK8 851 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 ZSWIM1Q9BR11 485 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 SNX25Q9H3E2 840 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 DPEP3Q9H4B8 488 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 ALG13Q9NP73 1137 aaKnown RBP10.68□□□□□ -0.7
COL8A1-206ENST00000474648 DDX43Q9NXZ2 648 aaKnown RBP10.68□□□□□ -0.7
COL8A1-206ENST00000474648 LZTS1Q9Y250 596 aa10.68□□□□□ -0.7
COL8A1-206ENST00000474648 ARHGEF37A1IGU5 675 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 EPOPA6NHQ4 379 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 A8MXQ7 604 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 H3BNC9 293 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 GRM6O15303 877 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 MFAP3LO75121 409 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 ATP2C2O75185 946 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 GFPT2O94808 682 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 KRT5P13647 590 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 ACAT1P24752 427 aaKnown RBP10.67□□□□□ -0.7
COL8A1-206ENST00000474648 DNAJB2P25686 324 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 USP8P40818 1118 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 YWHAHQ04917 246 aaPredicted RBP10.67□□□□□ -0.7
COL8A1-206ENST00000474648 ZNF394Q53GI3 561 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 ARSIQ5FYB1 569 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 SFMBT2Q5VUG0 894 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 HGSNATQ68CP4 663 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 FAM171BQ6P995 826 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 WDR59Q6PJI9 974 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 PRSS55Q6UWB4 352 aaPredicted RBP10.67□□□□□ -0.7
COL8A1-206ENST00000474648 CCDC186Q7Z3E2 898 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 ACOT1Q86TX2 421 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 GPR65Q8IYL9 337 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 VPS52Q8N1B4 723 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 ZNF397Q8NF99 534 aaPredicted RBP10.67□□□□□ -0.7
COL8A1-206ENST00000474648 OR10T2Q8NGX3 314 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 RIN2Q8WYP3 895 aaPredicted RBP10.67□□□□□ -0.7
COL8A1-206ENST00000474648 PIK3R5Q8WYR1 880 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 TFAP2BQ92481 460 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 KHSRPQ92945 711 aaKnown RBP eCLIP10.67□□□□□ -0.7
COL8A1-206ENST00000474648 TIFAQ96CG3 184 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 PPP1R9BQ96SB3 815 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 TMEM209Q96SK2 561 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 PKMYT1Q99640 499 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 ACBD6Q9BR61 282 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 NT5C1AQ9BXI3 368 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 ZBP1Q9H171 429 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 NUCKS1Q9H1E3 243 aaKnown RBP10.67□□□□□ -0.7
COL8A1-206ENST00000474648 CERS4Q9HA82 394 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 RXFP1Q9HBX9 757 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 CRTAC1Q9NQ79 661 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 STK39Q9UEW8 545 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 MTUS1Q9ULD2 1270 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 BACE2Q9Y5Z0 518 aa10.67□□□□□ -0.7
COL8A1-206ENST00000474648 TDRD15B5MCY1 1934 aaKnown RBP10.66□□□□□ -0.7
COL8A1-206ENST00000474648 LAMA2P24043 3122 aaKnown RBP10.66□□□□□ -0.7
COL8A1-206ENST00000474648 MYBPHLA2RUH7 354 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms