RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 USP41Q3LFD5 358 aa8.88□□□□□ -0.99
CNN3-205ENST00000474409 VARS2Q5ST30 1063 aaKnown RBP8.88□□□□□ -0.99
CNN3-205ENST00000474409 TAF3Q5VWG9 929 aa8.88□□□□□ -0.99
CNN3-205ENST00000474409 PPP2R2DQ66LE6 453 aa8.88□□□□□ -0.99
CNN3-205ENST00000474409 SMYD5Q6GMV2 418 aa8.88□□□□□ -0.99
CNN3-205ENST00000474409 ACOT1Q86TX2 421 aa8.88□□□□□ -0.99
CNN3-205ENST00000474409 SLC47A2Q86VL8 602 aa8.88□□□□□ -0.99
CNN3-205ENST00000474409 B3GALNT2Q8NCR0 500 aa8.88□□□□□ -0.99
CNN3-205ENST00000474409 SYN2Q92777 582 aaPredicted RBP8.88□□□□□ -0.99
CNN3-205ENST00000474409 TRIM44Q96DX7 344 aaPredicted RBP8.88□□□□□ -0.99
CNN3-205ENST00000474409 TMEM176AQ96HP8 235 aa8.88□□□□□ -0.99
CNN3-205ENST00000474409 B3GALT6Q96L58 329 aa8.88□□□□□ -0.99
CNN3-205ENST00000474409 SAMD11Q96NU1 681 aa8.88□□□□□ -0.99
CNN3-205ENST00000474409 TWNKQ96RR1 684 aa8.88□□□□□ -0.99
CNN3-205ENST00000474409 TGS1Q96RS0 853 aaKnown RBP8.88□□□□□ -0.99
CNN3-205ENST00000474409 BAG1Q99933 345 aaPredicted RBP8.88□□□□□ -0.99
CNN3-205ENST00000474409 SYT15Q9BQS2 421 aa8.88□□□□□ -0.99
CNN3-205ENST00000474409 C17orf80Q9BSJ5 609 aa8.88□□□□□ -0.99
CNN3-205ENST00000474409 C11orf84Q9BUA3 381 aaPredicted RBP8.88□□□□□ -0.99
CNN3-205ENST00000474409 PBX4Q9BYU1 374 aa8.88□□□□□ -0.99
CNN3-205ENST00000474409 GPR62Q9BZJ7 368 aa8.88□□□□□ -0.99
CNN3-205ENST00000474409 ELOVL4Q9GZR5 314 aa8.88□□□□□ -0.99
CNN3-205ENST00000474409 PDCL3Q9H2J4 239 aa8.88□□□□□ -0.99
CNN3-205ENST00000474409 DPEP3Q9H4B8 488 aa8.88□□□□□ -0.99
CNN3-205ENST00000474409 FAM49BQ9NUQ9 324 aa8.88□□□□□ -0.99
CNN3-205ENST00000474409 AIPL1Q9NZN9 384 aa8.88□□□□□ -0.99
CNN3-205ENST00000474409 STK39Q9UEW8 545 aa8.88□□□□□ -0.99
CNN3-205ENST00000474409 CDH9Q9ULB4 789 aa8.88□□□□□ -0.99
CNN3-205ENST00000474409 STXBP5LQ9Y2K9 1186 aa8.88□□□□□ -0.99
CNN3-205ENST00000474409 BZW2Q9Y6E2 419 aaKnown RBP8.88□□□□□ -0.99
CNN3-205ENST00000474409 TRIOBPQ9H2D6 2365 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 ATP8B3O60423 1300 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 H7C4K7 107 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 C2CD2LO14523 706 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 GABRDO14764 452 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 MED7O43513 233 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 CSPG5O95196 566 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 PDGFRBP09619 1106 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 FAM163BP0C2L3 166 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 LINC00271P0C7V0 271 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 SKILP12757 684 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 CPB1P15086 417 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 BRD2P25440 801 aaKnown RBP8.87□□□□□ -0.99
CNN3-205ENST00000474409 DNAJB2P25686 324 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 LMO2P25791 158 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 HNRNPH3P31942 346 aaKnown RBP8.87□□□□□ -0.99
CNN3-205ENST00000474409 CLCN1P35523 988 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 BMPR1AP36894 532 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 PRKCIP41743 596 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 PLCB3Q01970 1234 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 BMS1Q14692 1282 aaKnown RBP8.87□□□□□ -0.99
CNN3-205ENST00000474409 PSMD5Q16401 504 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 MEA1Q16626 185 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 CTXN3Q4LDR2 81 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 SGO2Q562F6 1265 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 MDH1BQ5I0G3 518 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 INTS6LQ5JSJ4 861 aaKnown RBP8.87□□□□□ -0.99
CNN3-205ENST00000474409 RTP2Q5QGT7 225 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 CYP26C1Q6V0L0 522 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 ANKS3Q6ZW76 656 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 LIMS2Q7Z4I7 341 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 DDX53Q86TM3 631 aaKnown RBP8.87□□□□□ -0.99
CNN3-205ENST00000474409 LRRC8AQ8IWT6 810 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 VPS52Q8N1B4 723 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 KLHL23Q8NBE8 558 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 SLC4A11Q8NBS3 891 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 EPS8L1Q8TE68 723 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 WHAMMQ8TF30 809 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 SLC20A1Q8WUM9 679 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 RIN2Q8WYP3 895 aaPredicted RBP8.87□□□□□ -0.99
CNN3-205ENST00000474409 HEXIM2Q96MH2 286 aaKnown RBP8.87□□□□□ -0.99
CNN3-205ENST00000474409 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.87□□□□□ -0.99
CNN3-205ENST00000474409 PLVAPQ9BX97 442 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 NKX2-4Q9H2Z4 354 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 HAUS4Q9H6D7 363 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 ACP6Q9NPH0 428 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 ENTPD7Q9NQZ7 604 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 CNTN6Q9UQ52 1028 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 YBX2Q9Y2T7 364 aaKnown RBP8.87□□□□□ -0.99
CNN3-205ENST00000474409 CEP83Q9Y592 693 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 NME7Q9Y5B8 376 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 DENND4AQ7Z401 1863 aa8.87□□□□□ -0.99
CNN3-205ENST00000474409 SOWAHDA6NJG2 315 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 OR6C75A6NL08 312 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 M0QYV0 167 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 AKR1B10O60218 316 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 LPXNO60711 386 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 ARHGEF15O94989 841 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 IPO7O95373 1038 aaKnown RBP8.86□□□□□ -0.99
CNN3-205ENST00000474409 CALCAP01258 141 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 PLEKP08567 350 aaPredicted RBP8.86□□□□□ -0.99
CNN3-205ENST00000474409 VDRP11473 427 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 SSTR3P32745 418 aaPredicted RBP8.86□□□□□ -0.99
CNN3-205ENST00000474409 CYLC1P35663 651 aaPredicted RBP8.86□□□□□ -0.99
CNN3-205ENST00000474409 CYP27A1Q02318 531 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 CREMQ03060 361 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 STILQ15468 1287 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 MAPRE1Q15691 268 aaKnown RBP8.86□□□□□ -0.99
CNN3-205ENST00000474409 GOLGA7BQ2TAP0 167 aa8.86□□□□□ -0.99
CNN3-205ENST00000474409 HGSNATQ68CP4 663 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms