RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 MAMSTRQ6ZN01 415 aa12.12□□□□□ -0.47
ACTB-209ENST00000473257 CEP68Q76N32 757 aa12.12□□□□□ -0.47
ACTB-209ENST00000473257 DYMQ7RTS9 669 aa12.12□□□□□ -0.47
ACTB-209ENST00000473257 FAM160A2Q8N612 972 aaPredicted RBP12.12□□□□□ -0.47
ACTB-209ENST00000473257 MAB21L3Q8N8X9 362 aa12.12□□□□□ -0.47
ACTB-209ENST00000473257 RASSF8Q8NHQ8 419 aa12.12□□□□□ -0.47
ACTB-209ENST00000473257 BPIFB1Q8TDL5 484 aa12.12□□□□□ -0.47
ACTB-209ENST00000473257 PI4K2AQ9BTU6 479 aa12.12□□□□□ -0.47
ACTB-209ENST00000473257 GPR88Q9GZN0 384 aa12.12□□□□□ -0.47
ACTB-209ENST00000473257 EBF3Q9H4W6 596 aa12.12□□□□□ -0.47
ACTB-209ENST00000473257 TASP1Q9H6P5 420 aa12.12□□□□□ -0.47
ACTB-209ENST00000473257 C8orf33Q9H7E9 229 aaPredicted RBP12.12□□□□□ -0.47
ACTB-209ENST00000473257 HPS4Q9NQG7 708 aa12.12□□□□□ -0.47
ACTB-209ENST00000473257 DPP3Q9NY33 737 aa12.12□□□□□ -0.47
ACTB-209ENST00000473257 KCND2Q9NZV8 630 aa12.12□□□□□ -0.47
ACTB-209ENST00000473257 ODF2LQ9ULJ1 636 aa12.12□□□□□ -0.47
ACTB-209ENST00000473257 NUP210Q8TEM1 1887 aaPredicted RBP12.11□□□□□ -0.47
ACTB-209ENST00000473257 ANTXRLA6NF34 631 aa12.11□□□□□ -0.47
ACTB-209ENST00000473257 H0YCG3 227 aa12.11□□□□□ -0.47
ACTB-209ENST00000473257 XPOTO43592 962 aaKnown RBP12.11□□□□□ -0.47
ACTB-209ENST00000473257 TBCAO75347 108 aaKnown RBP12.11□□□□□ -0.47
ACTB-209ENST00000473257 CYP11A1P05108 521 aa12.11□□□□□ -0.47
ACTB-209ENST00000473257 HAPLN1P10915 354 aaPredicted RBP12.11□□□□□ -0.47
ACTB-209ENST00000473257 HMGA1P17096 107 aaKnown RBP12.11□□□□□ -0.47
ACTB-209ENST00000473257 ACAT1P24752 427 aaKnown RBP12.11□□□□□ -0.47
ACTB-209ENST00000473257 ADSSP30520 456 aa12.11□□□□□ -0.47
ACTB-209ENST00000473257 CCINQ13939 588 aa12.11□□□□□ -0.47
ACTB-209ENST00000473257 PPP2R5DQ14738 602 aa12.11□□□□□ -0.47
ACTB-209ENST00000473257 ARHGAP29Q52LW3 1261 aa12.11□□□□□ -0.47
ACTB-209ENST00000473257 ARHGAP15Q53QZ3 475 aa12.11□□□□□ -0.47
ACTB-209ENST00000473257 ARL6IP4Q66PJ3 421 aaKnown RBP12.11□□□□□ -0.47
ACTB-209ENST00000473257 TXNDC8Q6A555 127 aa12.11□□□□□ -0.47
ACTB-209ENST00000473257 FSTL4Q6MZW2 842 aa12.11□□□□□ -0.47
ACTB-209ENST00000473257 PRR23CQ6ZRP0 262 aa12.11□□□□□ -0.47
ACTB-209ENST00000473257 LONP2Q86WA8 852 aa12.11□□□□□ -0.47
ACTB-209ENST00000473257 RALGPS2Q86X27 583 aaPredicted RBP12.11□□□□□ -0.47
ACTB-209ENST00000473257 SFR1Q86XK3 245 aa12.11□□□□□ -0.47
ACTB-209ENST00000473257 GPR161Q8N6U8 529 aaKnown RBP12.11□□□□□ -0.47
ACTB-209ENST00000473257 USP13Q92995 863 aaPredicted RBP12.11□□□□□ -0.47
ACTB-209ENST00000473257 E2F7Q96AV8 911 aa12.11□□□□□ -0.47
ACTB-209ENST00000473257 SAAL1Q96ER3 474 aa12.11□□□□□ -0.47
ACTB-209ENST00000473257 CALML4Q96GE6 196 aa12.11□□□□□ -0.47
ACTB-209ENST00000473257 BORCS6Q96GS4 357 aa12.11□□□□□ -0.47
ACTB-209ENST00000473257 EPSTI1Q96J88 318 aa12.11□□□□□ -0.47
ACTB-209ENST00000473257 RTKNQ9BST9 563 aa12.11□□□□□ -0.47
ACTB-209ENST00000473257 FGFBP2Q9BYJ0 223 aa12.11□□□□□ -0.47
ACTB-209ENST00000473257 AGO2Q9UKV8 859 aaKnown RBP12.11□□□□□ -0.47
ACTB-209ENST00000473257 MAGED2Q9UNF1 606 aaPredicted RBP12.11□□□□□ -0.47
ACTB-209ENST00000473257 ASB3Q9Y575 518 aa12.11□□□□□ -0.47
ACTB-209ENST00000473257 GOLGA8IPA6NC78 632 aa12.1□□□□□ -0.47
ACTB-209ENST00000473257 GOLGA8JA6NMD2 632 aa12.1□□□□□ -0.47
ACTB-209ENST00000473257 EGFP01133 1207 aa12.1□□□□□ -0.47
ACTB-209ENST00000473257 TAF6P49848 677 aa12.1□□□□□ -0.47
ACTB-209ENST00000473257 GTF2BQ00403 316 aa12.1□□□□□ -0.47
ACTB-209ENST00000473257 VEPH1Q14D04 833 aa12.1□□□□□ -0.47
ACTB-209ENST00000473257 RABEP1Q15276 862 aa12.1□□□□□ -0.47
ACTB-209ENST00000473257 SF3A1Q15459 793 aaKnown RBP12.1□□□□□ -0.47
ACTB-209ENST00000473257 TAF12Q16514 161 aa12.1□□□□□ -0.47
ACTB-209ENST00000473257 DDR2Q16832 855 aa12.1□□□□□ -0.47
ACTB-209ENST00000473257 ITPRIPL2Q3MIP1 535 aa12.1□□□□□ -0.47
ACTB-209ENST00000473257 FAM173BQ6P4H8 233 aa12.1□□□□□ -0.47
ACTB-209ENST00000473257 ITIH5Q86UX2 942 aa12.1□□□□□ -0.47
ACTB-209ENST00000473257 KBTBD6Q86V97 674 aa12.1□□□□□ -0.47
ACTB-209ENST00000473257 METTL23Q86XA0 190 aa12.1□□□□□ -0.47
ACTB-209ENST00000473257 NOC3LQ8WTT2 800 aaKnown RBP12.1□□□□□ -0.47
ACTB-209ENST00000473257 SLC22A12Q96S37 553 aa12.1□□□□□ -0.47
ACTB-209ENST00000473257 FAM213AQ9BRX8 229 aa12.1□□□□□ -0.47
ACTB-209ENST00000473257 IER2Q9BTL4 223 aa12.1□□□□□ -0.47
ACTB-209ENST00000473257 OXCT2Q9BYC2 517 aaPredicted RBP12.1□□□□□ -0.47
ACTB-209ENST00000473257 ARRDC1-AS1Q9H2J1 176 aa12.1□□□□□ -0.47
ACTB-209ENST00000473257 DAXXQ9UER7 740 aaPredicted RBP12.1□□□□□ -0.47
ACTB-209ENST00000473257 KCNG1Q9UIX4 513 aa12.1□□□□□ -0.47
ACTB-209ENST00000473257 CLIC4Q9Y696 253 aa12.1□□□□□ -0.47
ACTB-209ENST00000473257 CACNA1GO43497 2377 aa12.1□□□□□ -0.47
ACTB-209ENST00000473257 TCHHQ07283 1943 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 SPAG17Q6Q759 2223 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 SLC30A4O14863 429 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 DCLK1O15075 740 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 PRPF40AO75400 957 aaKnown RBP12.09□□□□□ -0.47
ACTB-209ENST00000473257 TADA3O75528 432 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 F11P03951 625 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 CYP2F1P24903 491 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 CDC25CP30307 473 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 POLR2BP30876 1174 aaKnown RBP12.09□□□□□ -0.47
ACTB-209ENST00000473257 TUFMP49411 452 aaKnown RBP12.09□□□□□ -0.47
ACTB-209ENST00000473257 MCM2P49736 904 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 CASP5P51878 434 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 NLRP12P59046 1061 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 TFAMQ00059 246 aaKnown RBP12.09□□□□□ -0.47
ACTB-209ENST00000473257 CSRP2Q16527 193 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 KYAT1Q16773 422 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 DGKKQ5KSL6 1271 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 LARP1BQ659C4 914 aaKnown RBP12.09□□□□□ -0.47
ACTB-209ENST00000473257 LMBRD2Q68DH5 695 aaPredicted RBP12.09□□□□□ -0.47
ACTB-209ENST00000473257 OSTM1Q86WC4 334 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 CMTM8Q8IZV2 173 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 PDCL2Q8N4E4 241 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 POMGNT1Q8WZA1 660 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 AK8Q96MA6 479 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 CLIC6Q96NY7 704 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms