RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 ELAVL2Q12926 359 aaKnown RBP20.45■□□□□ 0.87
PSPC1-203ENST00000471658 TAF3Q5VWG9 929 aa20.45■□□□□ 0.87
PSPC1-203ENST00000471658 PRSS55Q6UWB4 352 aaPredicted RBP20.45■□□□□ 0.87
PSPC1-203ENST00000471658 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.45■□□□□ 0.87
PSPC1-203ENST00000471658 ZNF571Q7Z3V5 609 aaPredicted RBP20.45■□□□□ 0.87
PSPC1-203ENST00000471658 DDX53Q86TM3 631 aaKnown RBP20.45■□□□□ 0.87
PSPC1-203ENST00000471658 UNC93AQ86WB7 457 aa20.45■□□□□ 0.87
PSPC1-203ENST00000471658 OR10T2Q8NGX3 314 aa20.45■□□□□ 0.87
PSPC1-203ENST00000471658 TFAP2BQ92481 460 aa20.45■□□□□ 0.87
PSPC1-203ENST00000471658 HEXIM2Q96MH2 286 aaKnown RBP20.45■□□□□ 0.87
PSPC1-203ENST00000471658 TTPALQ9BTX7 342 aa20.45■□□□□ 0.87
PSPC1-203ENST00000471658 ZNHIT6Q9NWK9 470 aaKnown RBP20.45■□□□□ 0.87
PSPC1-203ENST00000471658 PUF60Q9UHX1 559 aaKnown RBP20.45■□□□□ 0.87
PSPC1-203ENST00000471658 VWA8A3KMH1 1905 aa20.45■□□□□ 0.86
PSPC1-203ENST00000471658 CFHP08603 1231 aa20.45■□□□□ 0.86
PSPC1-203ENST00000471658 CYP11B1P15538 503 aa20.45■□□□□ 0.86
PSPC1-203ENST00000471658 GNA15P30679 374 aa20.45■□□□□ 0.86
PSPC1-203ENST00000471658 PPM1AP35813 382 aa20.45■□□□□ 0.86
PSPC1-203ENST00000471658 PRKCIP41743 596 aa20.45■□□□□ 0.86
PSPC1-203ENST00000471658 PTK2Q05397 1052 aa20.45■□□□□ 0.86
PSPC1-203ENST00000471658 MRPL58Q14197 206 aaKnown RBP20.45■□□□□ 0.86
PSPC1-203ENST00000471658 USP41Q3LFD5 358 aa20.45■□□□□ 0.86
PSPC1-203ENST00000471658 TTC39CQ8N584 583 aa20.45■□□□□ 0.86
PSPC1-203ENST00000471658 EPS8L1Q8TE68 723 aa20.45■□□□□ 0.86
PSPC1-203ENST00000471658 CERS4Q9HA82 394 aa20.45■□□□□ 0.86
PSPC1-203ENST00000471658 ALG13Q9NP73 1137 aaKnown RBP20.45■□□□□ 0.86
PSPC1-203ENST00000471658 NOCTQ9UK39 431 aaKnown RBP20.45■□□□□ 0.86
PSPC1-203ENST00000471658 TSC2P49815 1807 aa20.44■□□□□ 0.86
PSPC1-203ENST00000471658 FAM170AA1A519 330 aa20.44■□□□□ 0.86
PSPC1-203ENST00000471658 ARHGEF37A1IGU5 675 aa20.44■□□□□ 0.86
PSPC1-203ENST00000471658 OAZ2O95190 189 aa20.44■□□□□ 0.86
PSPC1-203ENST00000471658 SOD2P04179 222 aa20.44■□□□□ 0.86
PSPC1-203ENST00000471658 SERPING1P05155 500 aa20.44■□□□□ 0.86
PSPC1-203ENST00000471658 CD19P15391 556 aa20.44■□□□□ 0.86
PSPC1-203ENST00000471658 CHRNB2P17787 502 aa20.44■□□□□ 0.86
PSPC1-203ENST00000471658 FECHP22830 423 aa20.44■□□□□ 0.86
PSPC1-203ENST00000471658 PLCB3Q01970 1234 aa20.44■□□□□ 0.86
PSPC1-203ENST00000471658 TDRD12Q587J7 1177 aaKnown RBP20.44■□□□□ 0.86
PSPC1-203ENST00000471658 RSPO2Q6UXX9 243 aaPredicted RBP20.44■□□□□ 0.86
PSPC1-203ENST00000471658 CRYBG2Q8N1P7 616 aa20.44■□□□□ 0.86
PSPC1-203ENST00000471658 OLIG1Q8TAK6 271 aa20.44■□□□□ 0.86
PSPC1-203ENST00000471658 AUTS2Q8WXX7 1259 aa20.44■□□□□ 0.86
PSPC1-203ENST00000471658 RIN2Q8WYP3 895 aaPredicted RBP20.44■□□□□ 0.86
PSPC1-203ENST00000471658 DDX1Q92499 740 aaKnown RBP20.44■□□□□ 0.86
PSPC1-203ENST00000471658 BAG1Q99933 345 aaPredicted RBP20.44■□□□□ 0.86
PSPC1-203ENST00000471658 SYT15Q9BQS2 421 aa20.44■□□□□ 0.86
PSPC1-203ENST00000471658 HERC2P3Q9BVR0 1158 aa20.44■□□□□ 0.86
PSPC1-203ENST00000471658 KCNF1Q9H3M0 494 aa20.44■□□□□ 0.86
PSPC1-203ENST00000471658 FAM124BQ9H5Z6 455 aaPredicted RBP20.44■□□□□ 0.86
PSPC1-203ENST00000471658 CHST7Q9NS84 486 aa20.44■□□□□ 0.86
PSPC1-203ENST00000471658 MYBPHLA2RUH7 354 aa20.43■□□□□ 0.86
PSPC1-203ENST00000471658 C2CD2LO14523 706 aa20.43■□□□□ 0.86
PSPC1-203ENST00000471658 THAP12O43422 761 aa20.43■□□□□ 0.86
PSPC1-203ENST00000471658 PAEPP09466 180 aa20.43■□□□□ 0.86
PSPC1-203ENST00000471658 OR4Q2P0C623 313 aa20.43■□□□□ 0.86
PSPC1-203ENST00000471658 PTPN1P18031 435 aaKnown RBP20.43■□□□□ 0.86
PSPC1-203ENST00000471658 EIF4A3P38919 411 aaKnown RBP20.43■□□□□ 0.86
PSPC1-203ENST00000471658 KRT17Q04695 432 aa20.43■□□□□ 0.86
PSPC1-203ENST00000471658 VPS52Q8N1B4 723 aa20.43■□□□□ 0.86
PSPC1-203ENST00000471658 THEM5Q8N1Q8 247 aa20.43■□□□□ 0.86
PSPC1-203ENST00000471658 LNX1Q8TBB1 728 aaPredicted RBP20.43■□□□□ 0.86
PSPC1-203ENST00000471658 ZNF606Q8WXB4 792 aa20.43■□□□□ 0.86
PSPC1-203ENST00000471658 SYT11Q9BT88 431 aa20.43■□□□□ 0.86
PSPC1-203ENST00000471658 CRTAC1Q9NQ79 661 aa20.43■□□□□ 0.86
PSPC1-203ENST00000471658 FAM49BQ9NUQ9 324 aa20.43■□□□□ 0.86
PSPC1-203ENST00000471658 MSRAQ9UJ68 235 aa20.43■□□□□ 0.86
PSPC1-203ENST00000471658 CARNS1A5YM72 827 aa20.42■□□□□ 0.86
PSPC1-203ENST00000471658 SOWAHDA6NJG2 315 aa20.42■□□□□ 0.86
PSPC1-203ENST00000471658 CSPG5O95196 566 aa20.42■□□□□ 0.86
PSPC1-203ENST00000471658 MMEP08473 750 aa20.42■□□□□ 0.86
PSPC1-203ENST00000471658 DNAJB1P25685 340 aa20.42■□□□□ 0.86
PSPC1-203ENST00000471658 DNAJB2P25686 324 aa20.42■□□□□ 0.86
PSPC1-203ENST00000471658 DEKP35659 375 aaKnown RBP20.42■□□□□ 0.86
PSPC1-203ENST00000471658 BPIFB4P59827 614 aa20.42■□□□□ 0.86
PSPC1-203ENST00000471658 CCZ1BP86790 482 aa20.42■□□□□ 0.86
PSPC1-203ENST00000471658 CCZ1P86791 482 aaPredicted RBP20.42■□□□□ 0.86
PSPC1-203ENST00000471658 MTF1Q14872 753 aa20.42■□□□□ 0.86
PSPC1-203ENST00000471658 CTXN3Q4LDR2 81 aa20.42■□□□□ 0.86
PSPC1-203ENST00000471658 LRRTM3Q86VH5 581 aa20.42■□□□□ 0.86
PSPC1-203ENST00000471658 B3GALNT2Q8NCR0 500 aa20.42■□□□□ 0.86
PSPC1-203ENST00000471658 SPATA18Q8TC71 538 aa20.42■□□□□ 0.86
PSPC1-203ENST00000471658 TGS1Q96RS0 853 aaKnown RBP20.42■□□□□ 0.86
PSPC1-203ENST00000471658 AGPAT1Q99943 283 aa20.42■□□□□ 0.86
PSPC1-203ENST00000471658 ACBD6Q9BR61 282 aa20.42■□□□□ 0.86
PSPC1-203ENST00000471658 TMLHEQ9NVH6 421 aa20.42■□□□□ 0.86
PSPC1-203ENST00000471658 GTF3C4Q9UKN8 822 aa20.42■□□□□ 0.86
PSPC1-203ENST00000471658 CDH9Q9ULB4 789 aa20.42■□□□□ 0.86
PSPC1-203ENST00000471658 CCDC172P0C7W6 258 aa20.42■□□□□ 0.86
PSPC1-203ENST00000471658 VDRP11473 427 aa20.42■□□□□ 0.86
PSPC1-203ENST00000471658 RPL17P18621 184 aaKnown RBP20.42■□□□□ 0.86
PSPC1-203ENST00000471658 PDE6CP51160 858 aa20.42■□□□□ 0.86
PSPC1-203ENST00000471658 ERVK-21P61565 698 aa20.42■□□□□ 0.86
PSPC1-203ENST00000471658 MDH1BQ5I0G3 518 aa20.42■□□□□ 0.86
PSPC1-203ENST00000471658 PPP1R26Q5T8A7 1209 aaPredicted RBP20.42■□□□□ 0.86
PSPC1-203ENST00000471658 KIAA1841Q6NSI8 718 aa20.42■□□□□ 0.86
PSPC1-203ENST00000471658 SPPL3Q8TCT6 385 aa20.42■□□□□ 0.86
PSPC1-203ENST00000471658 NHEJ1Q9H9Q4 299 aaPredicted RBP20.42■□□□□ 0.86
PSPC1-203ENST00000471658 LAMA3Q16787 3333 aa20.41■□□□□ 0.86
PSPC1-203ENST00000471658 C5orf67F2Z3F1 127 aa20.41■□□□□ 0.86
PSPC1-203ENST00000471658 ADAM12O43184 909 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms