RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 TBX21Q9UL17 535 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 TRAF3IP3Q9Y228 551 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 ATP11BQ9Y2G3 1177 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 NOC2LQ9Y3T9 749 aaKnown RBP5.16□□□□□ -1.58
SF3B1-208ENST00000470268 PHLPP2Q6ZVD8 1323 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 LOXHD1Q8IVV2 1947 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 LOC100289279A0A1B0GTE1 492 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 ACKR2O00590 384 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 PDXKO00764 312 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 PSMA7O14818 248 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 HNRNPDLO14979 420 aaKnown RBP5.15□□□□□ -1.58
SF3B1-208ENST00000470268 FAM189A1O60320 539 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 NBNO60934 754 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 PIGRP01833 764 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 PRKCBP05771 671 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 GHRP10912 638 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 ATP1A3P13637 1013 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 ARF4P18085 180 aaPredicted RBP5.15□□□□□ -1.58
SF3B1-208ENST00000470268 PROZP22891 400 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 CASP4P49662 377 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 IRAK1P51617 712 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 EFNA5P52803 228 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 RBL2Q08999 1139 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 ALCAMQ13740 583 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 SEPT6Q14141 434 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 LPIN1Q14693 890 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 FAM187BQ17R55 369 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 FBXO47Q5MNV8 452 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 ZBTB41Q5SVQ8 909 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 SRGAP1Q7Z6B7 1085 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 ZBTB8OSQ8IWT0 167 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 ZC3H3Q8IXZ2 948 aaKnown RBP5.15□□□□□ -1.58
SF3B1-208ENST00000470268 SLC17A8Q8NDX2 589 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 NKD1Q969G9 470 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 HVCN1Q96D96 273 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 SCLYQ96I15 445 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 CPB2Q96IY4 423 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 SCLT1Q96NL6 688 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 ACCSQ96QU6 501 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 PPP1R9BQ96SB3 815 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 ACO2Q99798 780 aaKnown RBP5.15□□□□□ -1.58
SF3B1-208ENST00000470268 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.15□□□□□ -1.58
SF3B1-208ENST00000470268 SEZ6LQ9BYH1 1024 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 GCOM2Q9BZD3 368 aaPredicted RBP5.15□□□□□ -1.58
SF3B1-208ENST00000470268 WNT8AQ9H1J5 351 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 C2orf40Q9H1Z8 148 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 PCIF1Q9H4Z3 704 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 CCDC86Q9H6F5 360 aaKnown RBP5.15□□□□□ -1.58
SF3B1-208ENST00000470268 TMEM206Q9H813 350 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 TYW1Q9NV66 732 aaKnown RBP5.15□□□□□ -1.58
SF3B1-208ENST00000470268 FANCLQ9NW38 375 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 DMAC2Q9NW81 257 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 KCNG1Q9UIX4 513 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 STRIP2Q9ULQ0 834 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 NFE2L3Q9Y4A8 694 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 TRPV2Q9Y5S1 764 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 STYXL1Q9Y6J8 313 aa5.15□□□□□ -1.58
SF3B1-208ENST00000470268 UBE4BO95155 1302 aa5.15□□□□□ -1.59
SF3B1-208ENST00000470268 MROH7Q68CQ1 1323 aa5.15□□□□□ -1.59
SF3B1-208ENST00000470268 KIAA0100Q14667 2235 aaKnown RBP5.14□□□□□ -1.59
SF3B1-208ENST00000470268 KRTAP4-8A0A0G2JLE6 195 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 A0A1B0GUA9 196 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 TRIM43BA6NCK2 446 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 DCDC2CA8MYV0 355 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 H0YCG3 227 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 IKBKBO14920 756 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 MGEA5O60502 916 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 ADAM11O75078 769 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 AKAP3O75969 853 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 NR3C1P04150 777 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 ZNF18P17022 549 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 NR2F2P24468 414 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 CD52P31358 61 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 CYP2C18P33260 490 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 CCL23P55773 120 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 CDC42EP1Q00587 391 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 MYL5Q02045 173 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 RPL6Q02878 288 aaKnown RBP5.14□□□□□ -1.59
SF3B1-208ENST00000470268 LRRC63Q05C16 580 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 STRN3Q13033 797 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 PRPF4BQ13523 1007 aaKnown RBP5.14□□□□□ -1.59
SF3B1-208ENST00000470268 STIM1Q13586 685 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 TCTN1Q2MV58 587 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 EDRF1Q3B7T1 1238 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 SEZ6Q53EL9 994 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 CT47A1Q5JQC4 288 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-208ENST00000470268 SPATA1Q5VX52 437 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 CRELD2Q6UXH1 353 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-208ENST00000470268 TSHZ1Q6ZSZ6 1077 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 STXBP4Q6ZWJ1 553 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 LRRC8DQ7L1W4 858 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 RSPH3Q86UC2 560 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 SYCP3Q8IZU3 236 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 CSGALNACT2Q8N6G5 542 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 CAGE1Q8TC20 777 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 GPBAR1Q8TDU6 330 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 TRIM43Q96BQ3 446 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-208ENST00000470268 PDLIM2Q96JY6 352 aa5.14□□□□□ -1.59
SF3B1-208ENST00000470268 SRRTQ9BXP5 876 aaKnown RBP5.14□□□□□ -1.59
SF3B1-208ENST00000470268 GTPBP4Q9BZE4 634 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms