RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 DCP1BQ8IZD4 617 aaKnown RBP18.86■□□□□ 0.61
COL7A1-208ENST00000470076 GCNAQ96QF7 691 aa18.86■□□□□ 0.61
COL7A1-208ENST00000470076 USP28Q96RU2 1077 aa18.86■□□□□ 0.61
COL7A1-208ENST00000470076 LPIN3Q9BQK8 851 aa18.86■□□□□ 0.61
COL7A1-208ENST00000470076 ZSCAN16Q9H4T2 348 aaPredicted RBP18.86■□□□□ 0.61
COL7A1-208ENST00000470076 ZMYM5Q9UJ78 669 aa18.86■□□□□ 0.61
COL7A1-208ENST00000470076 FRMD3A2A2Y4 597 aa18.85■□□□□ 0.61
COL7A1-208ENST00000470076 KPNA1P52294 538 aaPredicted RBP18.85■□□□□ 0.61
COL7A1-208ENST00000470076 NRLP54845 237 aa18.85■□□□□ 0.61
COL7A1-208ENST00000470076 TFAMQ00059 246 aaKnown RBP18.85■□□□□ 0.61
COL7A1-208ENST00000470076 LRRTM3Q86VH5 581 aa18.85■□□□□ 0.61
COL7A1-208ENST00000470076 SYCP3Q8IZU3 236 aa18.85■□□□□ 0.61
COL7A1-208ENST00000470076 DCLK2Q8N568 766 aa18.85■□□□□ 0.61
COL7A1-208ENST00000470076 CACTINQ8WUQ7 758 aaKnown RBP18.85■□□□□ 0.61
COL7A1-208ENST00000470076 EPC1Q9H2F5 836 aa18.85■□□□□ 0.61
COL7A1-208ENST00000470076 TASP1Q9H6P5 420 aa18.85■□□□□ 0.61
COL7A1-208ENST00000470076 NCDNQ9UBB6 729 aa18.85■□□□□ 0.61
COL7A1-208ENST00000470076 MTMR6Q9Y217 621 aa18.85■□□□□ 0.61
COL7A1-208ENST00000470076 HAPLN1P10915 354 aaPredicted RBP18.84■□□□□ 0.61
COL7A1-208ENST00000470076 CHRNB1P11230 501 aa18.84■□□□□ 0.61
COL7A1-208ENST00000470076 CCR3P51677 355 aa18.84■□□□□ 0.61
COL7A1-208ENST00000470076 CASP5P51878 434 aa18.84■□□□□ 0.61
COL7A1-208ENST00000470076 TSPY1Q01534 308 aa18.84■□□□□ 0.61
COL7A1-208ENST00000470076 LRRC32Q14392 662 aa18.84■□□□□ 0.61
COL7A1-208ENST00000470076 GPIHBP1Q8IV16 184 aa18.84■□□□□ 0.61
COL7A1-208ENST00000470076 SAAL1Q96ER3 474 aa18.84■□□□□ 0.61
COL7A1-208ENST00000470076 PANK2Q9BZ23 570 aa18.84■□□□□ 0.61
COL7A1-208ENST00000470076 TMEM206Q9H813 350 aa18.84■□□□□ 0.61
COL7A1-208ENST00000470076 IL21Q9HBE4 155 aa18.84■□□□□ 0.61
COL7A1-208ENST00000470076 PANK4Q9NVE7 773 aa18.84■□□□□ 0.61
COL7A1-208ENST00000470076 ABI2Q9NYB9 513 aaPredicted RBP18.84■□□□□ 0.61
COL7A1-208ENST00000470076 RBAKQ9NYW8 714 aaPredicted RBP18.84■□□□□ 0.61
COL7A1-208ENST00000470076 PCDHB5Q9Y5E4 795 aa18.84■□□□□ 0.61
COL7A1-208ENST00000470076 DENND4CQ5VZ89 1909 aa18.84■□□□□ 0.61
COL7A1-208ENST00000470076 MYBPHLA2RUH7 354 aa18.83■□□□□ 0.6
COL7A1-208ENST00000470076 SLC38A8A6NNN8 435 aa18.83■□□□□ 0.6
COL7A1-208ENST00000470076 EXTL3O43909 919 aa18.83■□□□□ 0.6
COL7A1-208ENST00000470076 ITGB3P05106 788 aa18.83■□□□□ 0.6
COL7A1-208ENST00000470076 TDGF1P13385 188 aa18.83■□□□□ 0.6
COL7A1-208ENST00000470076 POLR2BP30876 1174 aaKnown RBP18.83■□□□□ 0.6
COL7A1-208ENST00000470076 WNT7BP56706 349 aa18.83■□□□□ 0.6
COL7A1-208ENST00000470076 CYP4F8P98187 520 aa18.83■□□□□ 0.6
COL7A1-208ENST00000470076 PLCB2Q00722 1185 aa18.83■□□□□ 0.6
COL7A1-208ENST00000470076 NFE2Q16621 373 aaPredicted RBP18.83■□□□□ 0.6
COL7A1-208ENST00000470076 RALGPS2Q86X27 583 aaPredicted RBP18.83■□□□□ 0.6
COL7A1-208ENST00000470076 CCDC65Q8IXS2 484 aa18.83■□□□□ 0.6
COL7A1-208ENST00000470076 GPR161Q8N6U8 529 aaKnown RBP18.83■□□□□ 0.6
COL7A1-208ENST00000470076 LRRC52Q8N7C0 313 aa18.83■□□□□ 0.6
COL7A1-208ENST00000470076 C1orf127Q8N9H9 656 aa18.83■□□□□ 0.6
COL7A1-208ENST00000470076 BPIFB1Q8TDL5 484 aa18.83■□□□□ 0.6
COL7A1-208ENST00000470076 GIPC2Q8TF65 315 aa18.83■□□□□ 0.6
COL7A1-208ENST00000470076 SECISBP2LQ93073 1101 aaKnown RBP18.83■□□□□ 0.6
COL7A1-208ENST00000470076 RMDN1Q96DB5 314 aa18.83■□□□□ 0.6
COL7A1-208ENST00000470076 LRRC3BQ96PB8 259 aa18.83■□□□□ 0.6
COL7A1-208ENST00000470076 ITGA11Q9UKX5 1188 aa18.83■□□□□ 0.6
COL7A1-208ENST00000470076 AGAP1Q9UPQ3 857 aa18.83■□□□□ 0.6
COL7A1-208ENST00000470076 SMG5Q9UPR3 1016 aaKnown RBP18.83■□□□□ 0.6
COL7A1-208ENST00000470076 A0A087X0B3 334 aa18.82■□□□□ 0.6
COL7A1-208ENST00000470076 SPECC1L-ADORA2AF8WAN1 911 aa18.82■□□□□ 0.6
COL7A1-208ENST00000470076 TULP1O00294 542 aaPredicted RBP18.82■□□□□ 0.6
COL7A1-208ENST00000470076 STX6O43752 255 aa18.82■□□□□ 0.6
COL7A1-208ENST00000470076 HUS1O60921 280 aa18.82■□□□□ 0.6
COL7A1-208ENST00000470076 PRAMEF12O95522 483 aa18.82■□□□□ 0.6
COL7A1-208ENST00000470076 CXCL12P48061 93 aa18.82■□□□□ 0.6
COL7A1-208ENST00000470076 NASPP49321 788 aaPredicted RBP18.82■□□□□ 0.6
COL7A1-208ENST00000470076 CDR1P51861 262 aa18.82■□□□□ 0.6
COL7A1-208ENST00000470076 STXBP4Q6ZWJ1 553 aa18.82■□□□□ 0.6
COL7A1-208ENST00000470076 TMEM86AQ8N2M4 240 aa18.82■□□□□ 0.6
COL7A1-208ENST00000470076 PDCL2Q8N4E4 241 aa18.82■□□□□ 0.6
COL7A1-208ENST00000470076 SPEM1Q8N4L4 309 aa18.82■□□□□ 0.6
COL7A1-208ENST00000470076 CELF5Q8N6W0 485 aaKnown RBP18.82■□□□□ 0.6
COL7A1-208ENST00000470076 ZSWIM2Q8NEG5 633 aa18.82■□□□□ 0.6
COL7A1-208ENST00000470076 ACBD6Q9BR61 282 aa18.82■□□□□ 0.6
COL7A1-208ENST00000470076 CBWD1Q9BRT8 395 aa18.82■□□□□ 0.6
COL7A1-208ENST00000470076 LRRC27Q9C0I9 530 aa18.82■□□□□ 0.6
COL7A1-208ENST00000470076 THG1LQ9NWX6 298 aaKnown RBP18.82■□□□□ 0.6
COL7A1-208ENST00000470076 ZNF638Q14966 1978 aaKnown RBP18.81■□□□□ 0.6
COL7A1-208ENST00000470076 GOLGA8IPA6NC78 632 aa18.81■□□□□ 0.6
COL7A1-208ENST00000470076 GOLGA8JA6NMD2 632 aa18.81■□□□□ 0.6
COL7A1-208ENST00000470076 KIAA0391O15091 583 aaKnown RBP18.81■□□□□ 0.6
COL7A1-208ENST00000470076 CTHP32929 405 aa18.81■□□□□ 0.6
COL7A1-208ENST00000470076 SOX9P48436 509 aa18.81■□□□□ 0.6
COL7A1-208ENST00000470076 STK38Q15208 465 aa18.81■□□□□ 0.6
COL7A1-208ENST00000470076 DGKKQ5KSL6 1271 aa18.81■□□□□ 0.6
COL7A1-208ENST00000470076 CMTM8Q8IZV2 173 aa18.81■□□□□ 0.6
COL7A1-208ENST00000470076 CSGALNACT2Q8N6G5 542 aa18.81■□□□□ 0.6
COL7A1-208ENST00000470076 PDILTQ8N807 584 aa18.81■□□□□ 0.6
COL7A1-208ENST00000470076 SPATA18Q8TC71 538 aa18.81■□□□□ 0.6
COL7A1-208ENST00000470076 LEO1Q8WVC0 666 aaPredicted RBP18.81■□□□□ 0.6
COL7A1-208ENST00000470076 ZFYVE19Q96K21 471 aa18.81■□□□□ 0.6
COL7A1-208ENST00000470076 SLC46A2Q9BY10 475 aa18.81■□□□□ 0.6
COL7A1-208ENST00000470076 FGFBP2Q9BYJ0 223 aa18.81■□□□□ 0.6
COL7A1-208ENST00000470076 TNMDQ9H2S6 317 aa18.81■□□□□ 0.6
COL7A1-208ENST00000470076 GDAP2Q9NXN4 497 aa18.81■□□□□ 0.6
COL7A1-208ENST00000470076 GTSE1Q9NYZ3 720 aa18.81■□□□□ 0.6
COL7A1-208ENST00000470076 L1RE1Q9UN81 338 aa18.81■□□□□ 0.6
COL7A1-208ENST00000470076 KIF26AQ9ULI4 1882 aaPredicted RBP18.8■□□□□ 0.6
COL7A1-208ENST00000470076 SOBPA7XYQ1 873 aa18.8■□□□□ 0.6
COL7A1-208ENST00000470076 K7ELQ4 463 aaPredicted RBP18.8■□□□□ 0.6
COL7A1-208ENST00000470076 PRPF40AO75400 957 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms