RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 MGAT5Q09328 741 aa5.34□□□□□ -1.55
SCFD1-205ENST00000469043 UBE3CQ15386 1083 aa5.34□□□□□ -1.55
SCFD1-205ENST00000469043 AGAP9Q5VTM2 703 aa5.34□□□□□ -1.55
SCFD1-205ENST00000469043 C4orf50Q6ZRC1 276 aa5.34□□□□□ -1.55
SCFD1-205ENST00000469043 GLB1L2Q8IW92 636 aa5.34□□□□□ -1.55
SCFD1-205ENST00000469043 MSL3Q8N5Y2 521 aaKnown RBP5.34□□□□□ -1.55
SCFD1-205ENST00000469043 TGFBRAP1Q8WUH2 860 aa5.34□□□□□ -1.55
SCFD1-205ENST00000469043 NUP133Q8WUM0 1156 aa5.34□□□□□ -1.55
SCFD1-205ENST00000469043 RSAD2Q8WXG1 361 aa5.34□□□□□ -1.55
SCFD1-205ENST00000469043 SLC9A6Q92581 669 aa5.34□□□□□ -1.55
SCFD1-205ENST00000469043 HDAC2Q92769 488 aaKnown RBP5.34□□□□□ -1.55
SCFD1-205ENST00000469043 ZBTB10Q96DT7 871 aa5.34□□□□□ -1.55
SCFD1-205ENST00000469043 ZNF496Q96IT1 587 aaPredicted RBP5.34□□□□□ -1.55
SCFD1-205ENST00000469043 FDXACB1Q9BRP7 624 aaPredicted RBP5.34□□□□□ -1.55
SCFD1-205ENST00000469043 DMRT3Q9NQL9 472 aa5.34□□□□□ -1.55
SCFD1-205ENST00000469043 TBC1D22BQ9NU19 505 aa5.34□□□□□ -1.55
SCFD1-205ENST00000469043 DNAJC28Q9NX36 388 aa5.34□□□□□ -1.55
SCFD1-205ENST00000469043 L1RE1Q9UN81 338 aa5.34□□□□□ -1.55
SCFD1-205ENST00000469043 TBKBP1A7MCY6 615 aa5.33□□□□□ -1.56
SCFD1-205ENST00000469043 RHPN2P1A8MT19 583 aa5.33□□□□□ -1.56
SCFD1-205ENST00000469043 B5MCH6 92 aa5.33□□□□□ -1.56
SCFD1-205ENST00000469043 NCK2O43639 380 aa5.33□□□□□ -1.56
SCFD1-205ENST00000469043 MGEA5O60502 916 aa5.33□□□□□ -1.56
SCFD1-205ENST00000469043 TMCC2O75069 709 aa5.33□□□□□ -1.56
SCFD1-205ENST00000469043 BAIAP3O94812 1187 aa5.33□□□□□ -1.56
SCFD1-205ENST00000469043 LTA4HP09960 611 aaKnown RBP5.33□□□□□ -1.56
SCFD1-205ENST00000469043 PDCP20941 246 aa5.33□□□□□ -1.56
SCFD1-205ENST00000469043 DDX6P26196 483 aaKnown RBP eCLIP5.33□□□□□ -1.56
SCFD1-205ENST00000469043 PHC1P78364 1004 aa5.33□□□□□ -1.56
SCFD1-205ENST00000469043 KIF23Q02241 960 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-205ENST00000469043 CDC37Q16543 378 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-205ENST00000469043 FAM209BQ5JX69 171 aa5.33□□□□□ -1.56
SCFD1-205ENST00000469043 IZUMO3Q5VZ72 239 aa5.33□□□□□ -1.56
SCFD1-205ENST00000469043 NPNTQ6UXI9 565 aa5.33□□□□□ -1.56
SCFD1-205ENST00000469043 USP45Q70EL2 814 aa5.33□□□□□ -1.56
SCFD1-205ENST00000469043 OR10H5Q8NGA6 315 aa5.33□□□□□ -1.56
SCFD1-205ENST00000469043 LRTOMTQ8WZ04 291 aa5.33□□□□□ -1.56
SCFD1-205ENST00000469043 MS4A5Q9H3V2 200 aa5.33□□□□□ -1.56
SCFD1-205ENST00000469043 R3HDMLQ9H3Y0 253 aa5.33□□□□□ -1.56
SCFD1-205ENST00000469043 RNF181Q9P0P0 153 aa5.33□□□□□ -1.56
SCFD1-205ENST00000469043 TMX2Q9Y320 296 aa5.33□□□□□ -1.56
SCFD1-205ENST00000469043 TTLL3Q9Y4R7 772 aa5.33□□□□□ -1.56
SCFD1-205ENST00000469043 NUMBLQ9Y6R0 609 aa5.33□□□□□ -1.56
SCFD1-205ENST00000469043 UNC119BA6NIH7 251 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 KPNA5O15131 536 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 GFPT2O94808 682 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 AGXTP21549 392 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 TECP42680 631 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 CASP5P51878 434 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 MAPK10P53779 464 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 ZBED6P86452 979 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 FOXI1Q12951 378 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 PDCD1Q15116 288 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 CNN3Q15417 329 aaKnown RBP5.32□□□□□ -1.56
SCFD1-205ENST00000469043 TAF12Q16514 161 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 NBPF8Q3BBV2 869 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 UAP1L1Q3KQV9 507 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 PDCD4Q53EL6 469 aaKnown RBP5.32□□□□□ -1.56
SCFD1-205ENST00000469043 C19orf54Q5BKX5 351 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 ZBTB41Q5SVQ8 909 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 ARMC6Q6NXE6 501 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 PGBD2Q6P3X8 592 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 ZSCAN30Q86W11 494 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 ZNF610Q8N9Z0 462 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 SIMC1Q8NDZ2 872 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 CAGE1Q8TC20 777 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 SSH1Q8WYL5 1049 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 TFAP2CQ92754 450 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 USP13Q92995 863 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-205ENST00000469043 WNT8AQ9H1J5 351 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 ITM2CQ9NQX7 267 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 SMYD2Q9NRG4 433 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 SERPINB13Q9UIV8 391 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 MAGED2Q9UNF1 606 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-205ENST00000469043 GPR45Q9Y5Y3 372 aa5.32□□□□□ -1.56
SCFD1-205ENST00000469043 COL11A2P13942 1736 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-205ENST00000469043 PRSS38A1L453 326 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 CAPN8A6NHC0 703 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 EIF3FO00303 357 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-205ENST00000469043 ADAMTS3O15072 1205 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 ZNF185O15231 689 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 KDM1AO60341 852 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 PRAMEF4O60810 478 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 NDUFS2O75306 463 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 ESRRBO95718 433 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 CSTBP04080 98 aaKnown RBP5.31□□□□□ -1.56
SCFD1-205ENST00000469043 PTMAP06454 111 aaKnown RBP5.31□□□□□ -1.56
SCFD1-205ENST00000469043 DHRS4L1P0CG22 281 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 HTR1BP28222 390 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 ADD2P35612 726 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 RAD52P43351 418 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 PPARAQ07869 468 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 TAF11Q15544 211 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 PGS1Q32NB8 556 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 ANO6Q4KMQ2 910 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 SPATA1Q5VX52 437 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 SYT12Q8IV01 421 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 COLGALT2Q8IYK4 626 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 ZFP28Q8NHY6 868 aa5.31□□□□□ -1.56
SCFD1-205ENST00000469043 PHKBQ93100 1093 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms