RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 PSMB7Q99436 277 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 RAB17Q9H0T7 212 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 CDHR5Q9HBB8 845 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 RNF186Q9NXI6 227 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 DDX56Q9NY93 547 aaKnown RBP10.8□□□□□ -0.68
MSH5-213ENST00000468136 PARP2Q9UGN5 583 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 L1RE1Q9UN81 338 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 PACSIN2Q9UNF0 486 aaPredicted RBP10.8□□□□□ -0.68
MSH5-213ENST00000468136 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.8□□□□□ -0.68
MSH5-213ENST00000468136 NOD1Q9Y239 953 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 IPPQ9Y573 584 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 MYADML2A6NDP7 307 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 TMEM191CA6NGB0 347 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 O00370 1275 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 PODXLO00592 558 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 NDC80O14777 642 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 FGGP02679 453 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 ITGA4P13612 1032 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 FGFR4P22455 802 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 DRG2P55039 364 aaKnown RBP10.79□□□□□ -0.68
MSH5-213ENST00000468136 VSNL1P62760 191 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 ZNF200P98182 395 aaPredicted RBP10.79□□□□□ -0.68
MSH5-213ENST00000468136 PTGISQ16647 500 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 CYP1B1Q16678 543 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 HADHQ16836 314 aaKnown RBP10.79□□□□□ -0.68
MSH5-213ENST00000468136 SCARA5Q6ZMJ2 495 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 MMS22LQ6ZRQ5 1243 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 ARCQ7LC44 396 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 LIMS2Q7Z4I7 341 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 POLNQ7Z5Q5 900 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 KATNAL2Q8IYT4 538 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 KRT222Q8N1A0 295 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 CRYBG2Q8N1P7 616 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 TMEM86AQ8N2M4 240 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 C1orf131Q8NDD1 294 aaKnown RBP10.79□□□□□ -0.68
MSH5-213ENST00000468136 EXD1Q8NHP7 514 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 WHAMMQ8TF30 809 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 TMEM40Q8WWA1 233 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 MS4A14Q96JA4 679 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 HEXIM2Q96MH2 286 aaKnown RBP10.79□□□□□ -0.68
MSH5-213ENST00000468136 LRRC1Q9BTT6 524 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 FRMD8P1Q9BZ68 369 aaPredicted RBP10.79□□□□□ -0.68
MSH5-213ENST00000468136 NXF3Q9H4D5 531 aaKnown RBP10.79□□□□□ -0.68
MSH5-213ENST00000468136 SMYD3Q9H7B4 428 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 SYNCQ9H7C4 482 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 HMX1Q9NP08 348 aaPredicted RBP10.79□□□□□ -0.68
MSH5-213ENST00000468136 GDF3Q9NR23 364 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 FAM114A2Q9NRY5 505 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 FAM105AQ9NUU6 356 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 HESX1Q9UBX0 185 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 POLIQ9UNA4 740 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 ST3GAL5Q9UNP4 418 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 EFR3BQ9Y2G0 817 aa10.79□□□□□ -0.68
MSH5-213ENST00000468136 UTP11Q9Y3A2 253 aaKnown RBP10.79□□□□□ -0.68
MSH5-213ENST00000468136 TCRBV5S1A1TA0A578 114 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 KPNA7A9QM74 516 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 MAP2K7O14733 419 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 FSCN2O14926 492 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 SART1O43290 800 aaKnown RBP10.78□□□□□ -0.68
MSH5-213ENST00000468136 HUS1O60921 280 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 AOC2O75106 756 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 PHF2O75151 1096 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 ERBB2P04626 1255 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 KRT7P08729 469 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 COL6A1P12109 1028 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 WARSP23381 471 aaKnown RBP10.78□□□□□ -0.68
MSH5-213ENST00000468136 CCND3P30281 292 aaPredicted RBP10.78□□□□□ -0.68
MSH5-213ENST00000468136 PTPN7P35236 360 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 ACADSBP45954 432 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 DNA2P51530 1060 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 NDST1P52848 882 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 ACLYP53396 1101 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 SLC8A3P57103 927 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 FAM193AP78312 1265 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 ITGA7Q13683 1181 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 ZNF394Q53GI3 561 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 PPP1R15BQ5SWA1 713 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 DNAAF5Q86Y56 855 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 SLC13A5Q86YT5 568 aaPredicted RBP10.78□□□□□ -0.68
MSH5-213ENST00000468136 RCOR2Q8IZ40 523 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 GOLGA6L1Q8N7Z2 621 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 C12orf50Q8NA57 414 aaPredicted RBP10.78□□□□□ -0.68
MSH5-213ENST00000468136 SMG8Q8ND04 991 aaKnown RBP10.78□□□□□ -0.68
MSH5-213ENST00000468136 APPL2Q8NEU8 664 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 GRK7Q8WTQ7 553 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 TFAP2BQ92481 460 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 CAVIN3Q969G5 261 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 FAM84AQ96KN4 292 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 UROC1Q96N76 676 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 ZMAT2Q96NC0 199 aaKnown RBP10.78□□□□□ -0.68
MSH5-213ENST00000468136 KRT12Q99456 494 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 ELOVL4Q9GZR5 314 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 SNX25Q9H3E2 840 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 ERVK-5Q9HDB9 667 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 FAM53CQ9NYF3 392 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 PCYOX1Q9UHG3 505 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 SNX9Q9Y5X1 595 aa10.78□□□□□ -0.68
MSH5-213ENST00000468136 TMEM110-MUSTN1A8MSY1 372 aa10.77□□□□□ -0.69
MSH5-213ENST00000468136 INPPL1O15357 1258 aa10.77□□□□□ -0.69
MSH5-213ENST00000468136 ATMINO43313 823 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms