RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 GREB1Q4ZG55 1949 aa20.66■□□□□ 0.9
COL9A3-206ENST00000466532 ANAPC1Q9H1A4 1944 aa20.66■□□□□ 0.9
COL9A3-206ENST00000466532 A0A087X0B3 334 aa20.65■□□□□ 0.9
COL9A3-206ENST00000466532 FRMD3A2A2Y4 597 aa20.65■□□□□ 0.9
COL9A3-206ENST00000466532 SLC38A8A6NNN8 435 aa20.65■□□□□ 0.9
COL9A3-206ENST00000466532 LDHAP00338 332 aaKnown RBP20.65■□□□□ 0.9
COL9A3-206ENST00000466532 ITGB3P05106 788 aa20.65■□□□□ 0.9
COL9A3-206ENST00000466532 GARTP22102 1010 aa20.65■□□□□ 0.9
COL9A3-206ENST00000466532 POLR2BP30876 1174 aaKnown RBP20.65■□□□□ 0.9
COL9A3-206ENST00000466532 PNPLA4P41247 253 aa20.65■□□□□ 0.9
COL9A3-206ENST00000466532 KPNA1P52294 538 aaPredicted RBP20.65■□□□□ 0.9
COL9A3-206ENST00000466532 MLLT6P55198 1093 aaPredicted RBP20.65■□□□□ 0.9
COL9A3-206ENST00000466532 CYP4F8P98187 520 aa20.65■□□□□ 0.9
COL9A3-206ENST00000466532 ALCAMQ13740 583 aa20.65■□□□□ 0.9
COL9A3-206ENST00000466532 TAF12Q16514 161 aa20.65■□□□□ 0.9
COL9A3-206ENST00000466532 DCP1BQ8IZD4 617 aaKnown RBP20.65■□□□□ 0.9
COL9A3-206ENST00000466532 PDILTQ8N807 584 aa20.65■□□□□ 0.9
COL9A3-206ENST00000466532 GIPC2Q8TF65 315 aa20.65■□□□□ 0.9
COL9A3-206ENST00000466532 NOC3LQ8WTT2 800 aaKnown RBP20.65■□□□□ 0.9
COL9A3-206ENST00000466532 IER2Q9BTL4 223 aa20.65■□□□□ 0.9
COL9A3-206ENST00000466532 FGFBP2Q9BYJ0 223 aa20.65■□□□□ 0.9
COL9A3-206ENST00000466532 ZSCAN16Q9H4T2 348 aaPredicted RBP20.65■□□□□ 0.9
COL9A3-206ENST00000466532 ABI2Q9NYB9 513 aaPredicted RBP20.65■□□□□ 0.9
COL9A3-206ENST00000466532 RBAKQ9NYW8 714 aaPredicted RBP20.65■□□□□ 0.9
COL9A3-206ENST00000466532 GOLGA8IPA6NC78 632 aa20.64■□□□□ 0.89
COL9A3-206ENST00000466532 GOLGA8JA6NMD2 632 aa20.64■□□□□ 0.89
COL9A3-206ENST00000466532 LILRB5O75023 590 aa20.64■□□□□ 0.89
COL9A3-206ENST00000466532 HAPLN1P10915 354 aaPredicted RBP20.64■□□□□ 0.89
COL9A3-206ENST00000466532 CDC25CP30307 473 aa20.64■□□□□ 0.89
COL9A3-206ENST00000466532 ARHGAP29Q52LW3 1261 aa20.64■□□□□ 0.89
COL9A3-206ENST00000466532 CACTINQ8WUQ7 758 aaKnown RBP20.64■□□□□ 0.89
COL9A3-206ENST00000466532 MSANTD3Q96H12 275 aa20.64■□□□□ 0.89
COL9A3-206ENST00000466532 ZFYVE19Q96K21 471 aa20.64■□□□□ 0.89
COL9A3-206ENST00000466532 LRRC3BQ96PB8 259 aa20.64■□□□□ 0.89
COL9A3-206ENST00000466532 FAM126AQ9BYI3 521 aaPredicted RBP20.64■□□□□ 0.89
COL9A3-206ENST00000466532 TASP1Q9H6P5 420 aa20.64■□□□□ 0.89
COL9A3-206ENST00000466532 C8orf33Q9H7E9 229 aaPredicted RBP20.64■□□□□ 0.89
COL9A3-206ENST00000466532 IL21Q9HBE4 155 aa20.64■□□□□ 0.89
COL9A3-206ENST00000466532 OBP2AQ9NY56 170 aa20.64■□□□□ 0.89
COL9A3-206ENST00000466532 NCDNQ9UBB6 729 aa20.64■□□□□ 0.89
COL9A3-206ENST00000466532 AGAP1Q9UPQ3 857 aa20.64■□□□□ 0.89
COL9A3-206ENST00000466532 RALGAPA1Q6GYQ0 2036 aa20.64■□□□□ 0.89
COL9A3-206ENST00000466532 PTPRDP23468 1912 aa20.63■□□□□ 0.89
COL9A3-206ENST00000466532 STX6O43752 255 aa20.63■□□□□ 0.89
COL9A3-206ENST00000466532 CHRNB1P11230 501 aa20.63■□□□□ 0.89
COL9A3-206ENST00000466532 SOX9P48436 509 aa20.63■□□□□ 0.89
COL9A3-206ENST00000466532 TSPY1Q01534 308 aa20.63■□□□□ 0.89
COL9A3-206ENST00000466532 PPP2R5DQ14738 602 aa20.63■□□□□ 0.89
COL9A3-206ENST00000466532 STK38Q15208 465 aa20.63■□□□□ 0.89
COL9A3-206ENST00000466532 C1orf228Q6PIY5 440 aa20.63■□□□□ 0.89
COL9A3-206ENST00000466532 ERMP1Q7Z2K6 904 aa20.63■□□□□ 0.89
COL9A3-206ENST00000466532 CCDC65Q8IXS2 484 aa20.63■□□□□ 0.89
COL9A3-206ENST00000466532 C1orf127Q8N9H9 656 aa20.63■□□□□ 0.89
COL9A3-206ENST00000466532 CBWD1Q9BRT8 395 aa20.63■□□□□ 0.89
COL9A3-206ENST00000466532 PCIF1Q9H4Z3 704 aa20.63■□□□□ 0.89
COL9A3-206ENST00000466532 PCDHB5Q9Y5E4 795 aa20.63■□□□□ 0.89
COL9A3-206ENST00000466532 HELZP42694 1942 aaKnown RBP20.63■□□□□ 0.89
COL9A3-206ENST00000466532 EXTL3O43909 919 aa20.62■□□□□ 0.89
COL9A3-206ENST00000466532 PRPF6O94906 941 aaKnown RBP20.62■□□□□ 0.89
COL9A3-206ENST00000466532 PRAMEF12O95522 483 aa20.62■□□□□ 0.89
COL9A3-206ENST00000466532 WEE1P30291 646 aa20.62■□□□□ 0.89
COL9A3-206ENST00000466532 NASPP49321 788 aaPredicted RBP20.62■□□□□ 0.89
COL9A3-206ENST00000466532 CCR3P51677 355 aa20.62■□□□□ 0.89
COL9A3-206ENST00000466532 MAMSTRQ6ZN01 415 aa20.62■□□□□ 0.89
COL9A3-206ENST00000466532 PDCL2Q8N4E4 241 aa20.62■□□□□ 0.89
COL9A3-206ENST00000466532 TTC8Q8TAM2 541 aa20.62■□□□□ 0.89
COL9A3-206ENST00000466532 BPIFB1Q8TDL5 484 aa20.62■□□□□ 0.89
COL9A3-206ENST00000466532 RMDN1Q96DB5 314 aa20.62■□□□□ 0.89
COL9A3-206ENST00000466532 EPC1Q9H2F5 836 aa20.62■□□□□ 0.89
COL9A3-206ENST00000466532 TMEM206Q9H813 350 aa20.62■□□□□ 0.89
COL9A3-206ENST00000466532 TMLHEQ9NVH6 421 aa20.62■□□□□ 0.89
COL9A3-206ENST00000466532 GTSE1Q9NYZ3 720 aa20.62■□□□□ 0.89
COL9A3-206ENST00000466532 SMG5Q9UPR3 1016 aaKnown RBP20.62■□□□□ 0.89
COL9A3-206ENST00000466532 ATG2BQ96BY7 2078 aa20.62■□□□□ 0.89
COL9A3-206ENST00000466532 SPECC1L-ADORA2AF8WAN1 911 aa20.61■□□□□ 0.89
COL9A3-206ENST00000466532 K7ELQ4 463 aaPredicted RBP20.61■□□□□ 0.89
COL9A3-206ENST00000466532 HUS1O60921 280 aa20.61■□□□□ 0.89
COL9A3-206ENST00000466532 KRT19P08727 400 aa20.61■□□□□ 0.89
COL9A3-206ENST00000466532 TDGF1P13385 188 aa20.61■□□□□ 0.89
COL9A3-206ENST00000466532 NRLP54845 237 aa20.61■□□□□ 0.89
COL9A3-206ENST00000466532 BFSP1Q12934 665 aa20.61■□□□□ 0.89
COL9A3-206ENST00000466532 LRRC32Q14392 662 aa20.61■□□□□ 0.89
COL9A3-206ENST00000466532 RALGPS2Q86X27 583 aaPredicted RBP20.61■□□□□ 0.89
COL9A3-206ENST00000466532 GPD1LQ8N335 351 aa20.61■□□□□ 0.89
COL9A3-206ENST00000466532 CSGALNACT2Q8N6G5 542 aa20.61■□□□□ 0.89
COL9A3-206ENST00000466532 LRRC52Q8N7C0 313 aa20.61■□□□□ 0.89
COL9A3-206ENST00000466532 FAM84AQ96KN4 292 aa20.61■□□□□ 0.89
COL9A3-206ENST00000466532 PI4K2AQ9BTU6 479 aa20.61■□□□□ 0.89
COL9A3-206ENST00000466532 SMG9Q9H0W8 520 aaKnown RBP20.61■□□□□ 0.89
COL9A3-206ENST00000466532 PDE11AQ9HCR9 933 aa20.61■□□□□ 0.89
COL9A3-206ENST00000466532 ITGA11Q9UKX5 1188 aa20.61■□□□□ 0.89
COL9A3-206ENST00000466532 L1RE1Q9UN81 338 aa20.61■□□□□ 0.89
COL9A3-206ENST00000466532 MYBPHLA2RUH7 354 aa20.6■□□□□ 0.89
COL9A3-206ENST00000466532 PRPF40AO75400 957 aaKnown RBP20.6■□□□□ 0.89
COL9A3-206ENST00000466532 TMEM191BP0C7N4 346 aa20.6■□□□□ 0.89
COL9A3-206ENST00000466532 CTHP32929 405 aa20.6■□□□□ 0.89
COL9A3-206ENST00000466532 CXCL12P48061 93 aa20.6■□□□□ 0.89
COL9A3-206ENST00000466532 PLCB2Q00722 1185 aa20.6■□□□□ 0.89
COL9A3-206ENST00000466532 MYL7Q01449 175 aa20.6■□□□□ 0.89
COL9A3-206ENST00000466532 NFE2Q16621 373 aaPredicted RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms