RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 FAM171A1Q5VUB5 890 aa15.29■□□□□ 0.04
COL6A1-202ENST00000463060 OVOS1Q6IE37 1185 aa15.29■□□□□ 0.04
COL6A1-202ENST00000463060 CYP26C1Q6V0L0 522 aa15.29■□□□□ 0.04
COL6A1-202ENST00000463060 DDX53Q86TM3 631 aaKnown RBP15.29■□□□□ 0.04
COL6A1-202ENST00000463060 NOP9Q86U38 636 aaKnown RBP15.29■□□□□ 0.04
COL6A1-202ENST00000463060 TMTC1Q8IUR5 882 aa15.29■□□□□ 0.04
COL6A1-202ENST00000463060 SLC30A5Q8TAD4 765 aa15.29■□□□□ 0.04
COL6A1-202ENST00000463060 PKMYT1Q99640 499 aa15.29■□□□□ 0.04
COL6A1-202ENST00000463060 BAG1Q99933 345 aaPredicted RBP15.29■□□□□ 0.04
COL6A1-202ENST00000463060 ACBD6Q9BR61 282 aa15.29■□□□□ 0.04
COL6A1-202ENST00000463060 ZNHIT6Q9NWK9 470 aaKnown RBP15.29■□□□□ 0.04
COL6A1-202ENST00000463060 YBX2Q9Y2T7 364 aaKnown RBP15.29■□□□□ 0.04
COL6A1-202ENST00000463060 PCDHB12Q9Y5F1 795 aa15.29■□□□□ 0.04
COL6A1-202ENST00000463060 GBF1Q92538 1859 aa15.29■□□□□ 0.04
COL6A1-202ENST00000463060 RANBP2P49792 3224 aaKnown RBP15.28■□□□□ 0.04
COL6A1-202ENST00000463060 A8MXQ7 604 aa15.28■□□□□ 0.04
COL6A1-202ENST00000463060 ATP2C2O75185 946 aa15.28■□□□□ 0.04
COL6A1-202ENST00000463060 FGF18O76093 207 aa15.28■□□□□ 0.04
COL6A1-202ENST00000463060 CLSTN1O94985 981 aa15.28■□□□□ 0.04
COL6A1-202ENST00000463060 SOD2P04179 222 aa15.28■□□□□ 0.04
COL6A1-202ENST00000463060 PTMAP06454 111 aaKnown RBP15.28■□□□□ 0.04
COL6A1-202ENST00000463060 PDGFRBP09619 1106 aa15.28■□□□□ 0.04
COL6A1-202ENST00000463060 PTPN1P18031 435 aaKnown RBP15.28■□□□□ 0.04
COL6A1-202ENST00000463060 RTP2Q5QGT7 225 aa15.28■□□□□ 0.04
COL6A1-202ENST00000463060 VARS2Q5ST30 1063 aaKnown RBP15.28■□□□□ 0.04
COL6A1-202ENST00000463060 FAM171BQ6P995 826 aa15.28■□□□□ 0.04
COL6A1-202ENST00000463060 SPRED2Q7Z698 418 aa15.28■□□□□ 0.04
COL6A1-202ENST00000463060 ACOT1Q86TX2 421 aa15.28■□□□□ 0.04
COL6A1-202ENST00000463060 METTL23Q86XA0 190 aa15.28■□□□□ 0.04
COL6A1-202ENST00000463060 ZNF677Q86XU0 584 aa15.28■□□□□ 0.04
COL6A1-202ENST00000463060 GPR65Q8IYL9 337 aa15.28■□□□□ 0.04
COL6A1-202ENST00000463060 SLC20A1Q8WUM9 679 aa15.28■□□□□ 0.04
COL6A1-202ENST00000463060 ZNF606Q8WXB4 792 aa15.28■□□□□ 0.04
COL6A1-202ENST00000463060 TMEM169Q96HH4 297 aa15.28■□□□□ 0.04
COL6A1-202ENST00000463060 AGPAT1Q99943 283 aa15.28■□□□□ 0.04
COL6A1-202ENST00000463060 LPIN3Q9BQK8 851 aa15.28■□□□□ 0.04
COL6A1-202ENST00000463060 TTPALQ9BTX7 342 aa15.28■□□□□ 0.04
COL6A1-202ENST00000463060 PLVAPQ9BX97 442 aa15.28■□□□□ 0.04
COL6A1-202ENST00000463060 DPEP3Q9H4B8 488 aa15.28■□□□□ 0.04
COL6A1-202ENST00000463060 CRTAC1Q9NQ79 661 aa15.28■□□□□ 0.04
COL6A1-202ENST00000463060 DDX43Q9NXZ2 648 aaKnown RBP15.28■□□□□ 0.04
COL6A1-202ENST00000463060 NENFQ9UMX5 172 aa15.28■□□□□ 0.04
COL6A1-202ENST00000463060 CHD9Q3L8U1 2897 aa15.28■□□□□ 0.04
COL6A1-202ENST00000463060 DDX3XO00571 662 aaKnown RBP eCLIP15.27■□□□□ 0.04
COL6A1-202ENST00000463060 LILRB3O75022 631 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 RB1P06400 928 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 CA3P07451 260 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 CFHP08603 1231 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 VDRP11473 427 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 ANXA13P27216 316 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 EIF4A3P38919 411 aaKnown RBP15.27■□□□□ 0.04
COL6A1-202ENST00000463060 PBX2P40425 430 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 ERVK-21P61565 698 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 FMO1Q01740 532 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 CDR2Q01850 454 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 YWHAHQ04917 246 aaPredicted RBP15.27■□□□□ 0.04
COL6A1-202ENST00000463060 ORC1Q13415 861 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 CNGA2Q16280 664 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 USP41Q3LFD5 358 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 ARHGAP17Q68EM7 881 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 RAD9BQ6WBX8 426 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 TDHQ8IZJ6 230 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 KLHL23Q8NBE8 558 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 CCDC112Q8NEF3 446 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 OR10T2Q8NGX3 314 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 LNX1Q8TBB1 728 aaPredicted RBP15.27■□□□□ 0.04
COL6A1-202ENST00000463060 PIK3R5Q8WYR1 880 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 TNIP3Q96KP6 325 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 B3GALT6Q96L58 329 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 ZNF830Q96NB3 372 aaPredicted RBP15.27■□□□□ 0.04
COL6A1-202ENST00000463060 C17orf80Q9BSJ5 609 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 HERC2P3Q9BVR0 1158 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 PBX4Q9BYU1 374 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 NHEJ1Q9H9Q4 299 aaPredicted RBP15.27■□□□□ 0.04
COL6A1-202ENST00000463060 STK39Q9UEW8 545 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 CDH9Q9ULB4 789 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 LZTS1Q9Y250 596 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 RWDD3Q9Y3V2 267 aa15.27■□□□□ 0.04
COL6A1-202ENST00000463060 O00370 1275 aa15.26■□□□□ 0.03
COL6A1-202ENST00000463060 LCA5LO95447 670 aa15.26■□□□□ 0.03
COL6A1-202ENST00000463060 MMEP08473 750 aa15.26■□□□□ 0.03
COL6A1-202ENST00000463060 ACAT1P24752 427 aaKnown RBP15.26■□□□□ 0.03
COL6A1-202ENST00000463060 BRD2P25440 801 aaKnown RBP15.26■□□□□ 0.03
COL6A1-202ENST00000463060 PCSK1P29120 753 aa15.26■□□□□ 0.03
COL6A1-202ENST00000463060 GNA15P30679 374 aa15.26■□□□□ 0.03
COL6A1-202ENST00000463060 DEKP35659 375 aaKnown RBP15.26■□□□□ 0.03
COL6A1-202ENST00000463060 DSG1Q02413 1049 aa15.26■□□□□ 0.03
COL6A1-202ENST00000463060 TAP1Q03518 808 aa15.26■□□□□ 0.03
COL6A1-202ENST00000463060 MTF1Q14872 753 aa15.26■□□□□ 0.03
COL6A1-202ENST00000463060 HS1BP3Q53T59 392 aa15.26■□□□□ 0.03
COL6A1-202ENST00000463060 RSPO2Q6UXX9 243 aaPredicted RBP15.26■□□□□ 0.03
COL6A1-202ENST00000463060 PAQR9Q6ZVX9 377 aa15.26■□□□□ 0.03
COL6A1-202ENST00000463060 LRRTM3Q86VH5 581 aa15.26■□□□□ 0.03
COL6A1-202ENST00000463060 CCDC170Q8IYT3 715 aa15.26■□□□□ 0.03
COL6A1-202ENST00000463060 THEM5Q8N1Q8 247 aa15.26■□□□□ 0.03
COL6A1-202ENST00000463060 C12orf29Q8N999 325 aa15.26■□□□□ 0.03
COL6A1-202ENST00000463060 B3GALNT2Q8NCR0 500 aa15.26■□□□□ 0.03
COL6A1-202ENST00000463060 SPPL3Q8TCT6 385 aa15.26■□□□□ 0.03
COL6A1-202ENST00000463060 HEXIM2Q96MH2 286 aaKnown RBP15.26■□□□□ 0.03
COL6A1-202ENST00000463060 TMEM209Q96SK2 561 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms