RNA–Protein interactions for RNA: ENST00000462438.1

RAE1-207, Transcript of ribonucleic acid export 1, humanhuman

TSL 2

Gene RAE1, Length 3,251 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-207ENST00000462438 ZNF677Q86XU0 584 aa12.87□□□□□ -0.35
RAE1-207ENST00000462438 KREMEN1Q96MU8 473 aa12.87□□□□□ -0.35
RAE1-207ENST00000462438 PAIP2Q9BPZ3 127 aaKnown RBP12.87□□□□□ -0.35
RAE1-207ENST00000462438 CXCL16Q9H2A7 254 aa12.87□□□□□ -0.35
RAE1-207ENST00000462438 KIAA1257Q9ULG3 409 aa12.87□□□□□ -0.35
RAE1-207ENST00000462438 NUB1Q9Y5A7 615 aa12.87□□□□□ -0.35
RAE1-207ENST00000462438 EPHB6O15197 1021 aa12.86□□□□□ -0.35
RAE1-207ENST00000462438 PAEPP09466 180 aa12.86□□□□□ -0.35
RAE1-207ENST00000462438 SOX5P35711 763 aa12.86□□□□□ -0.35
RAE1-207ENST00000462438 RANBP1P43487 201 aa12.86□□□□□ -0.35
RAE1-207ENST00000462438 KLK7P49862 253 aa12.86□□□□□ -0.35
RAE1-207ENST00000462438 FXR1P51114 621 aaKnown RBP eCLIP12.86□□□□□ -0.35
RAE1-207ENST00000462438 ELAVL2Q12926 359 aaKnown RBP12.86□□□□□ -0.35
RAE1-207ENST00000462438 LONRF2Q1L5Z9 754 aa12.86□□□□□ -0.35
RAE1-207ENST00000462438 CD300LGQ6UXG3 332 aa12.86□□□□□ -0.35
RAE1-207ENST00000462438 ARHGEF19Q8IW93 802 aa12.86□□□□□ -0.35
RAE1-207ENST00000462438 RNF168Q8IYW5 571 aaPredicted RBP12.86□□□□□ -0.35
RAE1-207ENST00000462438 ZNF483Q8TF39 744 aaPredicted RBP12.86□□□□□ -0.35
RAE1-207ENST00000462438 SUSD3Q96L08 255 aa12.86□□□□□ -0.35
RAE1-207ENST00000462438 CRACR2AQ9BSW2 395 aa12.86□□□□□ -0.35
RAE1-207ENST00000462438 FAM207AQ9NSI2 230 aaPredicted RBP12.86□□□□□ -0.35
RAE1-207ENST00000462438 PUF60Q9UHX1 559 aaKnown RBP12.86□□□□□ -0.35
RAE1-207ENST00000462438 RWDD3Q9Y3V2 267 aa12.86□□□□□ -0.35
RAE1-207ENST00000462438 NLRC5Q86WI3 1866 aa12.86□□□□□ -0.35
RAE1-207ENST00000462438 SSU72P8A0A1W2PR75 194 aa12.86□□□□□ -0.35
RAE1-207ENST00000462438 CCDC85CA6NKD9 419 aa12.86□□□□□ -0.35
RAE1-207ENST00000462438 CASP14P31944 242 aa12.86□□□□□ -0.35
RAE1-207ENST00000462438 LILRA4P59901 499 aa12.86□□□□□ -0.35
RAE1-207ENST00000462438 ZNF365Q70YC5 407 aa12.86□□□□□ -0.35
RAE1-207ENST00000462438 SPATS2LQ9NUQ6 558 aaKnown RBP12.86□□□□□ -0.35
RAE1-207ENST00000462438 SYN3O14994 580 aa12.86□□□□□ -0.35
RAE1-207ENST00000462438 GJB5O95377 273 aa12.86□□□□□ -0.35
RAE1-207ENST00000462438 LAG3P18627 525 aa12.86□□□□□ -0.35
RAE1-207ENST00000462438 POLR2FP61218 127 aaKnown RBP12.86□□□□□ -0.35
RAE1-207ENST00000462438 PPP1R2P3Q6NXS1 205 aa12.86□□□□□ -0.35
RAE1-207ENST00000462438 CACNA2D4Q7Z3S7 1137 aa12.86□□□□□ -0.35
RAE1-207ENST00000462438 RIN2Q8WYP3 895 aaPredicted RBP12.86□□□□□ -0.35
RAE1-207ENST00000462438 CLP1Q92989 425 aaKnown RBP12.86□□□□□ -0.35
RAE1-207ENST00000462438 PCMTD1Q96MG8 357 aaPredicted RBP12.86□□□□□ -0.35
RAE1-207ENST00000462438 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.86□□□□□ -0.357e-9■■■■□ 23.9
RAE1-207ENST00000462438 COLEC11Q9BWP8 271 aa12.86□□□□□ -0.35
RAE1-207ENST00000462438 CWH43Q9H720 699 aa12.86□□□□□ -0.35
RAE1-207ENST00000462438 FAM204AQ9H8W3 233 aa12.86□□□□□ -0.35
RAE1-207ENST00000462438 KPNA7A9QM74 516 aa12.85□□□□□ -0.35
RAE1-207ENST00000462438 TNNC1P63316 161 aa12.85□□□□□ -0.35
RAE1-207ENST00000462438 HSP90B2PQ58FF3 399 aa12.85□□□□□ -0.35
RAE1-207ENST00000462438 THEMIS2Q5TEJ8 643 aa12.85□□□□□ -0.35
RAE1-207ENST00000462438 SPDL1Q96EA4 605 aa12.85□□□□□ -0.35
RAE1-207ENST00000462438 SYT11Q9BT88 431 aa12.85□□□□□ -0.35
RAE1-207ENST00000462438 NRDE2Q9H7Z3 1164 aa12.85□□□□□ -0.35
RAE1-207ENST00000462438 UBE2TQ9NPD8 197 aaPredicted RBP12.85□□□□□ -0.35
RAE1-207ENST00000462438 PCDHB8Q9UN66 801 aa12.85□□□□□ -0.35
RAE1-207ENST00000462438 GABRDO14764 452 aa12.85□□□□□ -0.35
RAE1-207ENST00000462438 FGFR1P11362 822 aa12.85□□□□□ -0.35
RAE1-207ENST00000462438 KRT9P35527 623 aa12.85□□□□□ -0.35
RAE1-207ENST00000462438 USP8P40818 1118 aa12.85□□□□□ -0.35
RAE1-207ENST00000462438 DRAP1Q14919 205 aaPredicted RBP12.85□□□□□ -0.35
RAE1-207ENST00000462438 SFMBT2Q5VUG0 894 aa12.85□□□□□ -0.35
RAE1-207ENST00000462438 FUT8Q9BYC5 575 aa12.85□□□□□ -0.35
RAE1-207ENST00000462438 INSL6Q9Y581 213 aa12.85□□□□□ -0.35
RAE1-207ENST00000462438 TRAPPC3O43617 180 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 SERPING1P05155 500 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 EPHB4P54760 987 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 STILQ15468 1287 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 GLRA4Q5JXX5 417 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 TMTC1Q8IUR5 882 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 CCDC170Q8IYT3 715 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 TATDN2Q93075 761 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 SAMD11Q96NU1 681 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 FAM193BQ96PV7 902 aaPredicted RBP12.84□□□□□ -0.35
RAE1-207ENST00000462438 BARX2Q9UMQ3 279 aaPredicted RBP12.84□□□□□ -0.35
RAE1-207ENST00000462438 FAM169AQ9Y6X4 670 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 CILPO75339 1184 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 DDHD2O94830 711 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 C1RP00736 705 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 RHOXF2BP0C7M4 288 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 DEFB103AP81534 67 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 C11orf91Q3C1V1 193 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 IRF2BP2Q7Z5L9 587 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 TMEM139Q8IV31 216 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 RAD9AQ99638 391 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 GDF15Q99988 308 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 RHOXF2Q9BQY4 288 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 KCND1Q9NSA2 647 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 AJAP1Q9UKB5 411 aaPredicted RBP12.84□□□□□ -0.35
RAE1-207ENST00000462438 NRDCO43847 1150 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 LCA5LO95447 670 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 ODC1P11926 461 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 PPM1AP35813 382 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 LHX1P48742 406 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 CLCNKBP51801 687 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 AFF1P51825 1210 aaKnown RBP12.84□□□□□ -0.35
RAE1-207ENST00000462438 TSR1Q2NL82 804 aaKnown RBP12.84□□□□□ -0.35
RAE1-207ENST00000462438 C1QTNF12Q5T7M4 302 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 CCDC181Q5TID7 509 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 HERC6Q8IVU3 1022 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 PPM1KQ8N3J5 372 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 SPDYE1Q8NFV5 336 aaPredicted RBP12.84□□□□□ -0.35
RAE1-207ENST00000462438 DPF3Q92784 378 aa12.84□□□□□ -0.35
RAE1-207ENST00000462438 PPP1R13BQ96KQ4 1090 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms