RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 VPS11Q9H270 941 aa10.21□□□□□ -0.78
UFD1-205ENST00000459854 DMAP1Q9NPF5 467 aaPredicted RBP10.21□□□□□ -0.78
UFD1-205ENST00000459854 ATP8B3O60423 1300 aa10.21□□□□□ -0.78
UFD1-205ENST00000459854 hCG_1642624A0A1W2PR95 340 aa10.21□□□□□ -0.78
UFD1-205ENST00000459854 TRIM24O15164 1050 aa10.21□□□□□ -0.78
UFD1-205ENST00000459854 PSMD3O43242 534 aa10.21□□□□□ -0.78
UFD1-205ENST00000459854 ALBP02768 609 aa10.21□□□□□ -0.78
UFD1-205ENST00000459854 PDHBP11177 359 aa10.21□□□□□ -0.78
UFD1-205ENST00000459854 TOB2Q14106 344 aaPredicted RBP10.21□□□□□ -0.78
UFD1-205ENST00000459854 MOB2Q70IA6 237 aa10.21□□□□□ -0.78
UFD1-205ENST00000459854 PACS2Q86VP3 889 aa10.21□□□□□ -0.78
UFD1-205ENST00000459854 GPRC5AQ8NFJ5 357 aa10.21□□□□□ -0.78
UFD1-205ENST00000459854 ERP44Q9BS26 406 aa10.21□□□□□ -0.78
UFD1-205ENST00000459854 FRMD8P1Q9BZ68 369 aaPredicted RBP10.21□□□□□ -0.78
UFD1-205ENST00000459854 TRIM8Q9BZR9 551 aa10.21□□□□□ -0.78
UFD1-205ENST00000459854 AMACRQ9UHK6 382 aa10.21□□□□□ -0.78
UFD1-205ENST00000459854 FAM153AQ9UHL3 310 aa10.21□□□□□ -0.78
UFD1-205ENST00000459854 COL2A1P02458 1487 aaPredicted RBP10.2□□□□□ -0.78
UFD1-205ENST00000459854 DDX39AO00148 427 aaKnown RBP10.2□□□□□ -0.78
UFD1-205ENST00000459854 KITP10721 976 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 PRCPP42785 496 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 ALDH18A1P54886 795 aaKnown RBP10.2□□□□□ -0.78
UFD1-205ENST00000459854 TUBA4AP68366 448 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 SLC34A1Q06495 639 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 GPS1Q13098 491 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 STX5Q13190 355 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 UGP2Q16851 508 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 DEPDC1Q5TB30 811 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 RCOR2Q8IZ40 523 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 TC2NQ8N9U0 490 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 ATXN2LQ8WWM7 1075 aaKnown RBP10.2□□□□□ -0.78
UFD1-205ENST00000459854 PPP1R2P1Q96PQ5 205 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 PABPC3Q9H361 631 aaKnown RBP10.2□□□□□ -0.78
UFD1-205ENST00000459854 APPL1Q9UKG1 709 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 PNMA8CA0A1B0GUJ8 204 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 XPO1O14980 1071 aaKnown RBP10.2□□□□□ -0.78
UFD1-205ENST00000459854 FAM58BPP0C7Q3 252 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 PAX7P23759 505 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 FNTAP49354 379 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 DYNLT1P63172 113 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 ZBTB41Q5SVQ8 909 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 ARHGEF16Q5VV41 709 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 RSRC2Q7L4I2 434 aaKnown RBP10.2□□□□□ -0.78
UFD1-205ENST00000459854 TRAPPC11Q7Z392 1133 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 MAGEC3Q8TD91 643 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 MANSC1Q9H8J5 431 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 BFARQ9NZS9 450 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 FIS1Q9Y3D6 152 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 CNTNAP1P78357 1384 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 NCK2O43639 380 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 SNX2O60749 519 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 POTEIP0CG38 1075 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 VCAM1P19320 739 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 NFKBIAP25963 317 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 CDK17Q00537 523 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 SP4Q02446 784 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 CMTR1Q8N1G2 835 aaKnown RBP10.2□□□□□ -0.78
UFD1-205ENST00000459854 SEPT1Q8WYJ6 367 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 ANKS1AQ92625 1134 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 GPKOWQ92917 476 aaPredicted RBP eCLIP10.2□□□□□ -0.783e-7■■□□□ 12.2
UFD1-205ENST00000459854 MKL1Q969V6 931 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 FAR2Q96K12 515 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 GPHNQ9NQX3 736 aaPredicted RBP10.2□□□□□ -0.78
UFD1-205ENST00000459854 PGAP2Q9UHJ9 254 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 GMEB1Q9Y692 573 aa10.2□□□□□ -0.78
UFD1-205ENST00000459854 EIF4E1BA6NMX2 242 aaKnown RBP10.19□□□□□ -0.78
UFD1-205ENST00000459854 FAM25AB3EWG3 89 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 FAM25CB3EWG5 89 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 FAM25GB3EWG6 89 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 IRF6O14896 467 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 RTN2O75298 545 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 FGRP09769 529 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 TYK2P29597 1187 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 EIF2B2P49770 351 aaKnown RBP10.19□□□□□ -0.78
UFD1-205ENST00000459854 SEC24CP53992 1094 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 ANTXR2P58335 489 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 ROR1Q01973 937 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 PPIDQ08752 370 aaKnown RBP10.19□□□□□ -0.78
UFD1-205ENST00000459854 KCNH2Q12809 1159 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 AP3B2Q13367 1082 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 TP53BP2Q13625 1128 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 LRRC41Q15345 812 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 SPRYD7Q5W111 196 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 B3GNT6Q6ZMB0 384 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 KSR1Q8IVT5 923 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 SCUBE1Q8IWY4 988 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 MICU2Q8IYU8 434 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 TAB3Q8N5C8 712 aaPredicted RBP10.19□□□□□ -0.78
UFD1-205ENST00000459854 TBCKQ8TEA7 893 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 CDHR1Q96JP9 859 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 CAPNS2Q96L46 248 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 NUP85Q9BW27 656 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 ACAD9Q9H845 621 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 KMT5AQ9NQR1 393 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 FZD1Q9UP38 647 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 M0QZ92 97 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 PJA2O43164 708 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 ATP9AO75110 1047 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 SOX5P35711 763 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 KRT72Q14CN4 511 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms