RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 MSRAQ9UJ68 235 aa17.69■□□□□ 0.42
CCDC90B-202ENST00000455220 LZTS1Q9Y250 596 aa17.69■□□□□ 0.42
CCDC90B-202ENST00000455220 PLXNA4Q9HCM2 1894 aa17.68■□□□□ 0.42
CCDC90B-202ENST00000455220 A0A1W2PPC1 479 aa17.68■□□□□ 0.42
CCDC90B-202ENST00000455220 HCRTO43612 131 aa17.68■□□□□ 0.42
CCDC90B-202ENST00000455220 PCSK1P29120 753 aa17.68■□□□□ 0.42
CCDC90B-202ENST00000455220 BPIFB4P59827 614 aa17.68■□□□□ 0.42
CCDC90B-202ENST00000455220 CDK17Q00537 523 aa17.68■□□□□ 0.42
CCDC90B-202ENST00000455220 KRT17Q04695 432 aa17.68■□□□□ 0.42
CCDC90B-202ENST00000455220 TSR1Q2NL82 804 aaKnown RBP17.68■□□□□ 0.42
CCDC90B-202ENST00000455220 ZNF394Q53GI3 561 aa17.68■□□□□ 0.42
CCDC90B-202ENST00000455220 SPRED2Q7Z698 418 aa17.68■□□□□ 0.42
CCDC90B-202ENST00000455220 SLC47A2Q86VL8 602 aa17.68■□□□□ 0.42
CCDC90B-202ENST00000455220 GPR65Q8IYL9 337 aa17.68■□□□□ 0.42
CCDC90B-202ENST00000455220 ACBD6Q9BR61 282 aa17.68■□□□□ 0.42
CCDC90B-202ENST00000455220 TBC1D4O60343 1298 aa17.67■□□□□ 0.42
CCDC90B-202ENST00000455220 SMAD3P84022 425 aaKnown RBP17.67■□□□□ 0.42
CCDC90B-202ENST00000455220 DSG1Q02413 1049 aa17.67■□□□□ 0.42
CCDC90B-202ENST00000455220 ARID5AQ03989 594 aa17.67■□□□□ 0.42
CCDC90B-202ENST00000455220 PTK2Q05397 1052 aa17.67■□□□□ 0.42
CCDC90B-202ENST00000455220 ANKS3Q6ZW76 656 aa17.67■□□□□ 0.42
CCDC90B-202ENST00000455220 CEP57Q86XR8 500 aa17.67■□□□□ 0.42
CCDC90B-202ENST00000455220 THEM5Q8N1Q8 247 aa17.67■□□□□ 0.42
CCDC90B-202ENST00000455220 EPS8L1Q8TE68 723 aa17.67■□□□□ 0.42
CCDC90B-202ENST00000455220 PIK3R5Q8WYR1 880 aa17.67■□□□□ 0.42
CCDC90B-202ENST00000455220 TNIP3Q96KP6 325 aa17.67■□□□□ 0.42
CCDC90B-202ENST00000455220 B3GALT6Q96L58 329 aa17.67■□□□□ 0.42
CCDC90B-202ENST00000455220 NKX2-4Q9H2Z4 354 aa17.67■□□□□ 0.42
CCDC90B-202ENST00000455220 DPEP3Q9H4B8 488 aa17.67■□□□□ 0.42
CCDC90B-202ENST00000455220 ACP6Q9NPH0 428 aa17.67■□□□□ 0.42
CCDC90B-202ENST00000455220 ZNHIT6Q9NWK9 470 aaKnown RBP17.67■□□□□ 0.42
CCDC90B-202ENST00000455220 CDH9Q9ULB4 789 aa17.67■□□□□ 0.42
CCDC90B-202ENST00000455220 SERPING1P05155 500 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 PDGFRBP09619 1106 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 CYP11B1P15538 503 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 GNA15P30679 374 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 UBE3AQ05086 875 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 ORC1Q13415 861 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 KIAA0319Q5VV43 1072 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 ZNF280DQ6N043 979 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 GPIHBP1Q8IV16 184 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 B3GALNT2Q8NCR0 500 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 OR10T2Q8NGX3 314 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 LNX1Q8TBB1 728 aaPredicted RBP17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 SYT15Q9BQS2 421 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 SYT11Q9BT88 431 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 C11orf84Q9BUA3 381 aaPredicted RBP17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 OXCT2Q9BYC2 517 aaPredicted RBP17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 DNAI2Q9GZS0 605 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 ZBP1Q9H171 429 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 NOCTQ9UK39 431 aaKnown RBP17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 KIAA1257Q9ULG3 409 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 BZW2Q9Y6E2 419 aaKnown RBP17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 H7C4K7 107 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 VDRP11473 427 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 ACAT1P24752 427 aaKnown RBP17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 GLUD2P49448 558 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 PDE6CP51160 858 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 KLHL30Q0D2K2 578 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 INTS6LQ5JSJ4 861 aaKnown RBP17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 ACOT1Q86TX2 421 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 NOP9Q86U38 636 aaKnown RBP17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 TMEM139Q8IV31 216 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 LRRC8AQ8IWT6 810 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 VPS52Q8N1B4 723 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 DDX1Q92499 740 aaKnown RBP17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 PKMYT1Q99640 499 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 ZSWIM1Q9BR11 485 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 HAUS4Q9H6D7 363 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 ARHGAP20Q9P2F6 1191 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 MTRRQ9UBK8 725 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 PUF60Q9UHX1 559 aaKnown RBP17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 BACE2Q9Y5Z0 518 aa17.66■□□□□ 0.42
CCDC90B-202ENST00000455220 OR6C75A6NL08 312 aa17.65■□□□□ 0.42
CCDC90B-202ENST00000455220 CTSAP10619 480 aa17.65■□□□□ 0.42
CCDC90B-202ENST00000455220 SKILP12757 684 aa17.65■□□□□ 0.42
CCDC90B-202ENST00000455220 PTPN1P18031 435 aaKnown RBP17.65■□□□□ 0.42
CCDC90B-202ENST00000455220 DNAJB2P25686 324 aa17.65■□□□□ 0.42
CCDC90B-202ENST00000455220 LRIT3Q3SXY7 679 aa17.65■□□□□ 0.42
CCDC90B-202ENST00000455220 CTXN3Q4LDR2 81 aa17.65■□□□□ 0.42
CCDC90B-202ENST00000455220 PPP2R2DQ66LE6 453 aa17.65■□□□□ 0.42
CCDC90B-202ENST00000455220 FAM171BQ6P995 826 aa17.65■□□□□ 0.42
CCDC90B-202ENST00000455220 ZNF677Q86XU0 584 aa17.65■□□□□ 0.42
CCDC90B-202ENST00000455220 OLIG1Q8TAK6 271 aa17.65■□□□□ 0.42
CCDC90B-202ENST00000455220 SPPL3Q8TCT6 385 aa17.65■□□□□ 0.42
CCDC90B-202ENST00000455220 RIN2Q8WYP3 895 aaPredicted RBP17.65■□□□□ 0.42
CCDC90B-202ENST00000455220 TFAP2BQ92481 460 aa17.65■□□□□ 0.42
CCDC90B-202ENST00000455220 HEXIM2Q96MH2 286 aaKnown RBP17.65■□□□□ 0.42
CCDC90B-202ENST00000455220 CRTAC1Q9NQ79 661 aa17.65■□□□□ 0.42
CCDC90B-202ENST00000455220 SSU72P8A0A1W2PR75 194 aa17.64■□□□□ 0.41
CCDC90B-202ENST00000455220 LILRB3O75022 631 aa17.64■□□□□ 0.41
CCDC90B-202ENST00000455220 ATP2C2O75185 946 aa17.64■□□□□ 0.41
CCDC90B-202ENST00000455220 CALCAP01258 141 aa17.64■□□□□ 0.41
CCDC90B-202ENST00000455220 URODP06132 367 aa17.64■□□□□ 0.41
CCDC90B-202ENST00000455220 PTMAP06454 111 aaKnown RBP17.64■□□□□ 0.41
CCDC90B-202ENST00000455220 PSMC1P62191 440 aaKnown RBP17.64■□□□□ 0.41
CCDC90B-202ENST00000455220 TSPY1Q01534 308 aa17.64■□□□□ 0.41
CCDC90B-202ENST00000455220 MAPK8IP2Q13387 824 aaPredicted RBP17.64■□□□□ 0.41
CCDC90B-202ENST00000455220 PSMD5Q16401 504 aa17.64■□□□□ 0.41
CCDC90B-202ENST00000455220 ARHGAP17Q68EM7 881 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms