RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 ZNF571Q7Z3V5 609 aaPredicted RBP7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 EIF2AQ9BY44 585 aaKnown RBP7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 TSPYL1Q9H0U9 437 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 NEUROG2Q9H2A3 272 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 RGS18Q9NS28 235 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 RNF14Q9UBS8 474 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 TBX20Q9UMR3 447 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 COG5Q9UP83 839 aa7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 MRPL42Q9Y6G3 142 aaKnown RBP7.86□□□□□ -1.15
CDC42BPA-208ENST00000442054 SRRM3A6NNA2 597 aaPredicted RBP7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 LYPLA2O95372 231 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 BYSLQ13895 437 aaKnown RBP7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 GIT2Q14161 759 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 PSMD5Q16401 504 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 DUOXA2Q1HG44 320 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 PTCRAQ6ISU1 281 aaPredicted RBP7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 B3GNT9Q6UX72 402 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 XXYLT1Q8NBI6 393 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 TMEM40Q8WWA1 233 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 ZBTB9Q96C00 473 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 CCDC42Q96M95 316 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 YBX2Q9Y2T7 364 aaKnown RBP7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 MRPS23Q9Y3D9 190 aaKnown RBP7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 GRM6O15303 877 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 CXCL8P10145 99 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 MCF2P10911 925 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 CXCR5P32302 372 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 OR1D2P34982 312 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 PIK3CAP42336 1068 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 YWHAHQ04917 246 aaPredicted RBP7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 ADAM9Q13443 819 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 ZNF667Q5HYK9 610 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 SCARA5Q6ZMJ2 495 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 KDM7AQ6ZMT4 941 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 RRAGAQ7L523 313 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 SUGP1Q8IWZ8 645 aaKnown RBP7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 CASP10Q92851 521 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 ZBTB45Q96K62 511 aaPredicted RBP7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 GDAP1L1Q96MZ0 367 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 PGLYRP2Q96PD5 576 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 ABI2Q9NYB9 513 aaPredicted RBP7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 PCDHA3Q9Y5H8 950 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 CUL9Q8IWT3 2517 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 TSPAN1O60635 241 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 DESP17661 470 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 NR2F2P24468 414 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 GUCY2CP25092 1073 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 MRPS25P82663 173 aaKnown RBP7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 FKBP3Q00688 224 aaKnown RBP7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 C1orf228Q6PIY5 440 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 KIAA1328Q86T90 577 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 TTC30AQ86WT1 665 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 DCP1BQ8IZD4 617 aaKnown RBP7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 ACTRT1Q8TDG2 376 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 TTPALQ9BTX7 342 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 SLC12A6Q9UHW9 1150 aa7.85□□□□□ -1.15
CDC42BPA-208ENST00000442054 SDK1Q7Z5N4 2213 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 RLFQ13129 1914 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 NRP1O14786 923 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 PALMO75781 387 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 ODC1P11926 461 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 KRT5P13647 590 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 TAF6P49848 677 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 RBP5P82980 135 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 CREMQ03060 361 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 TCEAL1Q15170 157 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 MAP9Q49MG5 647 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 ARHGAP15Q53QZ3 475 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 FKBP15Q5T1M5 1219 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 DCAF12L1Q5VU92 463 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 FUT10Q6P4F1 479 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 SPATA2LQ8IUW3 424 aaPredicted RBP7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 GPD1LQ8N335 351 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 POP1Q99575 1024 aaKnown RBP7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 TRPC7Q9HCX4 862 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 XPNPEP1Q9NQW7 623 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 BCCIPQ9P287 314 aaKnown RBP eCLIP7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 HESX1Q9UBX0 185 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 STK39Q9UEW8 545 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 TTC7AQ9ULT0 858 aaPredicted RBP7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 DOCK5Q9H7D0 1870 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 ARL5CA6NH57 179 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 SOX1O00570 391 aaPredicted RBP7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 PODXLO00592 558 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 CEP120Q8N960 986 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 PLVAPQ9BX97 442 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 LMAN2LQ9H0V9 348 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 PLEKHA4Q9H4M7 779 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 ADAM28Q9UKQ2 775 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 TNFSF13BQ9Y275 285 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 MCM3APO60318 1980 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 LCTP09848 1927 aa7.84□□□□□ -1.15
CDC42BPA-208ENST00000442054 C9IYK1 514 aa7.84□□□□□ -1.16
CDC42BPA-208ENST00000442054 GOLGA8KD6RF30 607 aa7.84□□□□□ -1.16
CDC42BPA-208ENST00000442054 TGFB1I1O43294 461 aa7.84□□□□□ -1.16
CDC42BPA-208ENST00000442054 TACC1O75410 805 aa7.84□□□□□ -1.16
CDC42BPA-208ENST00000442054 PON1P27169 355 aa7.84□□□□□ -1.16
CDC42BPA-208ENST00000442054 PTK2Q05397 1052 aa7.84□□□□□ -1.16
CDC42BPA-208ENST00000442054 SV2CQ496J9 727 aa7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms